RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
SCO1-202ENST00000577335 LCE2BO14633 110 aa9.12□□□□□ -0.95
SCO1-202ENST00000577335 USH2AO75445 5202 aa9.11□□□□□ -0.95
SCO1-202ENST00000577335 TRAV7A0A075B6U4 112 aa9.11□□□□□ -0.95
SCO1-202ENST00000577335 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
SCO1-202ENST00000577335 NDUFC1O43677 76 aa9.06□□□□□ -0.96
SCO1-202ENST00000577335 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
SCO1-202ENST00000577335 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
SCO1-202ENST00000577335 H0YAA0 97 aa8.94□□□□□ -0.98
SCO1-202ENST00000577335 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
SCO1-202ENST00000577335 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
SCO1-202ENST00000577335 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
SCO1-202ENST00000577335 SPRR2GQ9BYE4 73 aa8.86□□□□□ -0.99
SCO1-202ENST00000577335 ACYP2P14621 99 aa8.84□□□□□ -0.99
SCO1-202ENST00000577335 SNURFQ9Y675 71 aa8.83□□□□□ -1
SCO1-202ENST00000577335 KRTAP19-6Q3LI70 58 aa8.81□□□□□ -1
SCO1-202ENST00000577335 C20orf197Q8N268 126 aa8.81□□□□□ -1
SCO1-202ENST00000577335 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
SCO1-202ENST00000577335 SPANXA2-OT1Q8N9U9 137 aa8.77□□□□□ -1.01
SCO1-202ENST00000577335 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
SCO1-202ENST00000577335 KRTAP19-8Q3LI54 63 aa8.76□□□□□ -1.01
SCO1-202ENST00000577335 Q5VV11 94 aa8.73□□□□□ -1.01
SCO1-202ENST00000577335 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
SCO1-202ENST00000577335 COX7CP15954 63 aa8.7□□□□□ -1.02
SCO1-202ENST00000577335 MT1BP07438 61 aa8.68□□□□□ -1.02
SCO1-202ENST00000577335 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
SCO1-202ENST00000577335 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
SCO1-202ENST00000577335 P0C880 135 aa8.59□□□□□ -1.03
SCO1-202ENST00000577335 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
SCO1-202ENST00000577335 R4GN34 69 aa8.56□□□□□ -1.04
SCO1-202ENST00000577335 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
SCO1-202ENST00000577335 A6NN06 94 aa8.5□□□□□ -1.05
SCO1-202ENST00000577335 H7BZZ5 65 aa8.49□□□□□ -1.05
SCO1-202ENST00000577335 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
SCO1-202ENST00000577335 M0QZ58 72 aa8.48□□□□□ -1.05
SCO1-202ENST00000577335 KRTAP10-5P60370 271 aa8.45□□□□□ -1.06
SCO1-202ENST00000577335 COA5Q86WW8 74 aa8.45□□□□□ -1.06
SCO1-202ENST00000577335 KRTAP9-7A8MTY7 169 aa8.43□□□□□ -1.06
SCO1-202ENST00000577335 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
SCO1-202ENST00000577335 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
SCO1-202ENST00000577335 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
SCO1-202ENST00000577335 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
SCO1-202ENST00000577335 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
SCO1-202ENST00000577335 PRO2289Q9P1D8 64 aa8.3□□□□□ -1.08
SCO1-202ENST00000577335 SEC61GP60059 68 aa8.26□□□□□ -1.09
SCO1-202ENST00000577335 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
SCO1-202ENST00000577335 SERP1Q9Y6X1 66 aa8.22□□□□□ -1.09
SCO1-202ENST00000577335 MT1XP80297 61 aa8.21□□□□□ -1.1
SCO1-202ENST00000577335 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
SCO1-202ENST00000577335 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
SCO1-202ENST00000577335 TMEM258P61165 79 aa8.08□□□□□ -1.12
SCO1-202ENST00000577335 A0A1B0GU33 70 aa8.06□□□□□ -1.12
SCO1-202ENST00000577335 A0A1B0GU69 56 aa8.04□□□□□ -1.12
SCO1-202ENST00000577335 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
SCO1-202ENST00000577335 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
SCO1-202ENST00000577335 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
SCO1-202ENST00000577335 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
SCO1-202ENST00000577335 CAMK2N1Q7Z7J9 78 aa7.91□□□□□ -1.14
SCO1-202ENST00000577335 A0A0D9SG42 100 aa7.9□□□□□ -1.14
SCO1-202ENST00000577335 LINC01558Q9Y6Z2 57 aa7.88□□□□□ -1.15
SCO1-202ENST00000577335 SMIM26A0A096LP01 95 aa7.86□□□□□ -1.15
SCO1-202ENST00000577335 NEBP20929 6669 aa7.85□□□□□ -1.15
SCO1-202ENST00000577335 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
SCO1-202ENST00000577335 KRTAP10-7P60409 375 aaPredicted RBP7.81□□□□□ -1.16
SCO1-202ENST00000577335 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
SCO1-202ENST00000577335 KMT2DO14686 5537 aa7.81□□□□□ -1.16
SCO1-202ENST00000577335 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
SCO1-202ENST00000577335 MUC12Q9UKN1 5478 aa7.79□□□□□ -1.16
SCO1-202ENST00000577335 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
SCO1-202ENST00000577335 KRTAP4-8A0A0G2JLE6 195 aa7.72□□□□□ -1.17
SCO1-202ENST00000577335 SPRR2FQ96RM1 72 aa7.72□□□□□ -1.17
SCO1-202ENST00000577335 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
SCO1-202ENST00000577335 A8MU10 97 aa7.7□□□□□ -1.18
SCO1-202ENST00000577335 MDN1Q9NU22 5596 aa7.68□□□□□ -1.18
SCO1-202ENST00000577335 UQCR11O14957 56 aa7.65□□□□□ -1.18
SCO1-202ENST00000577335 V9GYY9 64 aa7.63□□□□□ -1.19
SCO1-202ENST00000577335 Q1T7F1 81 aa7.55□□□□□ -1.2
SCO1-202ENST00000577335 SPRR2EP22531 72 aa7.54□□□□□ -1.2
SCO1-202ENST00000577335 SPRR2BP35325 72 aa7.54□□□□□ -1.2
SCO1-202ENST00000577335 SPRR2AP35326 72 aa7.54□□□□□ -1.2
SCO1-202ENST00000577335 PCP4P48539 62 aa7.54□□□□□ -1.2
SCO1-202ENST00000577335 LCE1AQ5T7P2 110 aa7.5□□□□□ -1.21
SCO1-202ENST00000577335 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
SCO1-202ENST00000577335 PSPHP1O15172 72 aa7.45□□□□□ -1.22
SCO1-202ENST00000577335 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
SCO1-202ENST00000577335 KRTAP20-1Q3LI63 56 aa7.42□□□□□ -1.22
SCO1-202ENST00000577335 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
SCO1-202ENST00000577335 TNP1P09430 55 aa7.39□□□□□ -1.23
SCO1-202ENST00000577335 K7ERS5 55 aa7.34□□□□□ -1.23
SCO1-202ENST00000577335 KRTAP2-3P0C7H8 128 aa7.34□□□□□ -1.23
SCO1-202ENST00000577335 KRTAP2-4Q9BYR9 128 aa7.34□□□□□ -1.23
SCO1-202ENST00000577335 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
SCO1-202ENST00000577335 SPRR2DP22532 72 aa7.3□□□□□ -1.24
SCO1-202ENST00000577335 MT1EP04732 61 aa7.26□□□□□ -1.25
SCO1-202ENST00000577335 A6NED7 52 aa7.25□□□□□ -1.25
SCO1-202ENST00000577335 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.26
SCO1-202ENST00000577335 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
SCO1-202ENST00000577335 KRTAP19-3Q7Z4W3 81 aa7.16□□□□□ -1.26
SCO1-202ENST00000577335 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
SCO1-202ENST00000577335 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms