RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
ERCC4-208ENST00000576348 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
ERCC4-208ENST00000576348 M0R2T5 61 aa8.1□□□□□ -1.11
ERCC4-208ENST00000576348 LCA10Q71F78 164 aa8.07□□□□□ -1.12
ERCC4-208ENST00000576348 COA5Q86WW8 74 aa8.07□□□□□ -1.12
ERCC4-208ENST00000576348 MT1HP80294 61 aa8.06□□□□□ -1.12
ERCC4-208ENST00000576348 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
ERCC4-208ENST00000576348 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
ERCC4-208ENST00000576348 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
ERCC4-208ENST00000576348 SERP1Q9Y6X1 66 aa7.95□□□□□ -1.14
ERCC4-208ENST00000576348 FAT4Q6V0I7 4981 aa7.93□□□□□ -1.14
ERCC4-208ENST00000576348 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
ERCC4-208ENST00000576348 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
ERCC4-208ENST00000576348 SEC61GP60059 68 aa7.77□□□□□ -1.17
ERCC4-208ENST00000576348 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
ERCC4-208ENST00000576348 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
ERCC4-208ENST00000576348 H0YAA0 97 aa7.76□□□□□ -1.17
ERCC4-208ENST00000576348 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
ERCC4-208ENST00000576348 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
ERCC4-208ENST00000576348 MT2AP02795 61 aa7.69□□□□□ -1.18
ERCC4-208ENST00000576348 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
ERCC4-208ENST00000576348 A0A1B0GU69 56 aa7.68□□□□□ -1.18
ERCC4-208ENST00000576348 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
ERCC4-208ENST00000576348 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
ERCC4-208ENST00000576348 V9GYY9 64 aa7.66□□□□□ -1.18
ERCC4-208ENST00000576348 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
ERCC4-208ENST00000576348 MT1FP04733 61 aa7.62□□□□□ -1.19
ERCC4-208ENST00000576348 P0C880 135 aa7.62□□□□□ -1.19
ERCC4-208ENST00000576348 Q1T7F1 81 aa7.59□□□□□ -1.19
ERCC4-208ENST00000576348 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
ERCC4-208ENST00000576348 R4GN34 69 aa7.53□□□□□ -1.2
ERCC4-208ENST00000576348 A0A1B0GU33 70 aa7.51□□□□□ -1.21
ERCC4-208ENST00000576348 M0QZ58 72 aa7.51□□□□□ -1.21
ERCC4-208ENST00000576348 PSPHP1O15172 72 aa7.51□□□□□ -1.21
ERCC4-208ENST00000576348 LCE2BO14633 110 aa7.44□□□□□ -1.22
ERCC4-208ENST00000576348 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
ERCC4-208ENST00000576348 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
ERCC4-208ENST00000576348 Q5VV11 94 aa7.39□□□□□ -1.23
ERCC4-208ENST00000576348 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
ERCC4-208ENST00000576348 UQCR11O14957 56 aa7.38□□□□□ -1.23
ERCC4-208ENST00000576348 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
ERCC4-208ENST00000576348 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
ERCC4-208ENST00000576348 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
ERCC4-208ENST00000576348 A6NED7 52 aa7.33□□□□□ -1.24
ERCC4-208ENST00000576348 A0A0D9SG42 100 aa7.31□□□□□ -1.24
ERCC4-208ENST00000576348 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
ERCC4-208ENST00000576348 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
ERCC4-208ENST00000576348 A8MU10 97 aa7.22□□□□□ -1.25
ERCC4-208ENST00000576348 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
ERCC4-208ENST00000576348 A6NN06 94 aa7.18□□□□□ -1.26
ERCC4-208ENST00000576348 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
ERCC4-208ENST00000576348 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
ERCC4-208ENST00000576348 MT1BP07438 61 aa7.14□□□□□ -1.27
ERCC4-208ENST00000576348 K7ERS5 55 aa7.1□□□□□ -1.27
ERCC4-208ENST00000576348 CDC42SE1Q9NRR8 79 aa7.1□□□□□ -1.27
ERCC4-208ENST00000576348 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
ERCC4-208ENST00000576348 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
ERCC4-208ENST00000576348 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
ERCC4-208ENST00000576348 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
ERCC4-208ENST00000576348 USH2AO75445 5202 aa7.01□□□□□ -1.29
ERCC4-208ENST00000576348 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
ERCC4-208ENST00000576348 KRTAP19-6Q3LI70 58 aa6.91□□□□□ -1.3
ERCC4-208ENST00000576348 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
ERCC4-208ENST00000576348 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
ERCC4-208ENST00000576348 MT1XP80297 61 aa6.86□□□□□ -1.31
ERCC4-208ENST00000576348 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
ERCC4-208ENST00000576348 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
ERCC4-208ENST00000576348 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
ERCC4-208ENST00000576348 SSPOA2VEC9 5147 aa6.77□□□□□ -1.32
ERCC4-208ENST00000576348 KRTAP9-6A0A140TA67 174 aa6.75□□□□□ -1.33
ERCC4-208ENST00000576348 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
ERCC4-208ENST00000576348 PRO0628Q9UI54 55 aa6.7□□□□□ -1.34
ERCC4-208ENST00000576348 ROMO1P60602 79 aa6.67□□□□□ -1.34
ERCC4-208ENST00000576348 TNP1P09430 55 aa6.64□□□□□ -1.35
ERCC4-208ENST00000576348 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
ERCC4-208ENST00000576348 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
ERCC4-208ENST00000576348 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
ERCC4-208ENST00000576348 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
ERCC4-208ENST00000576348 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
ERCC4-208ENST00000576348 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
ERCC4-208ENST00000576348 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
ERCC4-208ENST00000576348 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
ERCC4-208ENST00000576348 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
ERCC4-208ENST00000576348 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
ERCC4-208ENST00000576348 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
ERCC4-208ENST00000576348 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
ERCC4-208ENST00000576348 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
ERCC4-208ENST00000576348 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
ERCC4-208ENST00000576348 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
ERCC4-208ENST00000576348 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
ERCC4-208ENST00000576348 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
ERCC4-208ENST00000576348 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
ERCC4-208ENST00000576348 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
ERCC4-208ENST00000576348 KMT2DO14686 5537 aa6.13□□□□□ -1.43
ERCC4-208ENST00000576348 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
ERCC4-208ENST00000576348 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
ERCC4-208ENST00000576348 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
ERCC4-208ENST00000576348 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.44
ERCC4-208ENST00000576348 MT1EP04732 61 aa6.05□□□□□ -1.44
ERCC4-208ENST00000576348 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms