RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
LITAF-218ENST00000576036 SNURFQ9Y675 71 aa7.35□□□□□ -1.23
LITAF-218ENST00000576036 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
LITAF-218ENST00000576036 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
LITAF-218ENST00000576036 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
LITAF-218ENST00000576036 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
LITAF-218ENST00000576036 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
LITAF-218ENST00000576036 COX7CP15954 63 aa7.27□□□□□ -1.25
LITAF-218ENST00000576036 LCE2BO14633 110 aa7.25□□□□□ -1.25
LITAF-218ENST00000576036 NDUFC1O43677 76 aa7.22□□□□□ -1.25
LITAF-218ENST00000576036 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
LITAF-218ENST00000576036 SPANXA2-OT1Q8N9U9 137 aa7.18□□□□□ -1.26
LITAF-218ENST00000576036 USH2AO75445 5202 aa7.17□□□□□ -1.26
LITAF-218ENST00000576036 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.26
LITAF-218ENST00000576036 ACYP2P14621 99 aa7.14□□□□□ -1.27
LITAF-218ENST00000576036 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
LITAF-218ENST00000576036 H0YAA0 97 aa7.13□□□□□ -1.27
LITAF-218ENST00000576036 H7BZZ5 65 aa7.12□□□□□ -1.27
LITAF-218ENST00000576036 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
LITAF-218ENST00000576036 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
LITAF-218ENST00000576036 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
LITAF-218ENST00000576036 SSPOA2VEC9 5147 aa7.03□□□□□ -1.28
LITAF-218ENST00000576036 P0C880 135 aa7□□□□□ -1.29
LITAF-218ENST00000576036 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
LITAF-218ENST00000576036 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
LITAF-218ENST00000576036 COA5Q86WW8 74 aa6.98□□□□□ -1.29
LITAF-218ENST00000576036 MT1BP07438 61 aa6.97□□□□□ -1.29
LITAF-218ENST00000576036 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
LITAF-218ENST00000576036 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
LITAF-218ENST00000576036 KRTAP19-6Q3LI70 58 aa6.91□□□□□ -1.3
LITAF-218ENST00000576036 Q5VV11 94 aa6.86□□□□□ -1.31
LITAF-218ENST00000576036 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.31
LITAF-218ENST00000576036 R4GN34 69 aa6.8□□□□□ -1.32
LITAF-218ENST00000576036 M0QZ58 72 aa6.79□□□□□ -1.32
LITAF-218ENST00000576036 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
LITAF-218ENST00000576036 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
LITAF-218ENST00000576036 TMEM258P61165 79 aa6.76□□□□□ -1.33
LITAF-218ENST00000576036 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
LITAF-218ENST00000576036 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
LITAF-218ENST00000576036 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
LITAF-218ENST00000576036 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
LITAF-218ENST00000576036 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
LITAF-218ENST00000576036 A6NN06 94 aa6.64□□□□□ -1.35
LITAF-218ENST00000576036 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
LITAF-218ENST00000576036 SEC61GP60059 68 aa6.6□□□□□ -1.35
LITAF-218ENST00000576036 MT1XP80297 61 aa6.6□□□□□ -1.35
LITAF-218ENST00000576036 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
LITAF-218ENST00000576036 A0A1B0GU69 56 aa6.56□□□□□ -1.36
LITAF-218ENST00000576036 PCP4P48539 62 aa6.56□□□□□ -1.36
LITAF-218ENST00000576036 A0A1B0GU33 70 aa6.55□□□□□ -1.36
LITAF-218ENST00000576036 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
LITAF-218ENST00000576036 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
LITAF-218ENST00000576036 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
LITAF-218ENST00000576036 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
LITAF-218ENST00000576036 A0A0D9SG42 100 aa6.44□□□□□ -1.38
LITAF-218ENST00000576036 KRTAP6-3Q3LI67 103 aa6.44□□□□□ -1.38
LITAF-218ENST00000576036 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
LITAF-218ENST00000576036 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
LITAF-218ENST00000576036 A8MU10 97 aa6.38□□□□□ -1.39
LITAF-218ENST00000576036 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
LITAF-218ENST00000576036 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
LITAF-218ENST00000576036 Q1T7F1 81 aa6.32□□□□□ -1.4
LITAF-218ENST00000576036 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
LITAF-218ENST00000576036 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
LITAF-218ENST00000576036 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
LITAF-218ENST00000576036 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
LITAF-218ENST00000576036 V9GYY9 64 aa6.26□□□□□ -1.41
LITAF-218ENST00000576036 PSPHP1O15172 72 aa6.25□□□□□ -1.41
LITAF-218ENST00000576036 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
LITAF-218ENST00000576036 UQCR11O14957 56 aa6.24□□□□□ -1.41
LITAF-218ENST00000576036 KMT2DO14686 5537 aa6.22□□□□□ -1.41
LITAF-218ENST00000576036 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
LITAF-218ENST00000576036 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
LITAF-218ENST00000576036 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
LITAF-218ENST00000576036 NEBP20929 6669 aa6.17□□□□□ -1.42
LITAF-218ENST00000576036 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
LITAF-218ENST00000576036 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
LITAF-218ENST00000576036 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
LITAF-218ENST00000576036 H3BS24 57 aa6.09□□□□□ -1.43
LITAF-218ENST00000576036 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
LITAF-218ENST00000576036 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
LITAF-218ENST00000576036 A6NED7 52 aa6.02□□□□□ -1.45
LITAF-218ENST00000576036 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
LITAF-218ENST00000576036 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
LITAF-218ENST00000576036 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
LITAF-218ENST00000576036 TNP1P09430 55 aa5.89□□□□□ -1.47
LITAF-218ENST00000576036 SPRR2EP22531 72 aa5.88□□□□□ -1.47
LITAF-218ENST00000576036 SPRR2BP35325 72 aa5.88□□□□□ -1.47
LITAF-218ENST00000576036 SPRR2AP35326 72 aa5.88□□□□□ -1.47
LITAF-218ENST00000576036 K7ERS5 55 aa5.87□□□□□ -1.47
LITAF-218ENST00000576036 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
LITAF-218ENST00000576036 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
LITAF-218ENST00000576036 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
LITAF-218ENST00000576036 MT1EP04732 61 aa5.82□□□□□ -1.48
LITAF-218ENST00000576036 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
LITAF-218ENST00000576036 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
LITAF-218ENST00000576036 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
LITAF-218ENST00000576036 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
LITAF-218ENST00000576036 SPRR2DP22532 72 aa5.69□□□□□ -1.5
LITAF-218ENST00000576036 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms