RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
CCDC40-215ENST00000576033 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
CCDC40-215ENST00000576033 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
CCDC40-215ENST00000576033 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
CCDC40-215ENST00000576033 CYP4F30PQ9H0H9 118 aa4.09□□□□□ -1.75
CCDC40-215ENST00000576033 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
CCDC40-215ENST00000576033 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
CCDC40-215ENST00000576033 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
CCDC40-215ENST00000576033 MT1HP80294 61 aa4.06□□□□□ -1.76
CCDC40-215ENST00000576033 HRES1P13985 223 aa4.03□□□□□ -1.76
CCDC40-215ENST00000576033 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
CCDC40-215ENST00000576033 C7orf65Q6ZTY9 151 aa4□□□□□ -1.77
CCDC40-215ENST00000576033 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
CCDC40-215ENST00000576033 SPINK7P58062 85 aa3.98□□□□□ -1.77
CCDC40-215ENST00000576033 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
CCDC40-215ENST00000576033 IGKV2D-30A0A075B6S6 120 aa3.97□□□□□ -1.77
CCDC40-215ENST00000576033 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
CCDC40-215ENST00000576033 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
CCDC40-215ENST00000576033 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
CCDC40-215ENST00000576033 COA5Q86WW8 74 aa3.95□□□□□ -1.78
CCDC40-215ENST00000576033 M0R2T5 61 aa3.94□□□□□ -1.78
CCDC40-215ENST00000576033 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
CCDC40-215ENST00000576033 A8MUN3 132 aa3.91□□□□□ -1.78
CCDC40-215ENST00000576033 ACYP2P14621 99 aa3.91□□□□□ -1.78
CCDC40-215ENST00000576033 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
CCDC40-215ENST00000576033 RBM12B-AS1Q9P1G2 102 aa3.9□□□□□ -1.79
CCDC40-215ENST00000576033 Q1T7F1 81 aa3.89□□□□□ -1.79
CCDC40-215ENST00000576033 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
CCDC40-215ENST00000576033 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
CCDC40-215ENST00000576033 MT2AP02795 61 aa3.84□□□□□ -1.79
CCDC40-215ENST00000576033 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
CCDC40-215ENST00000576033 V9GYY9 64 aa3.84□□□□□ -1.79
CCDC40-215ENST00000576033 MT1FP04733 61 aa3.83□□□□□ -1.8
CCDC40-215ENST00000576033 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
CCDC40-215ENST00000576033 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
CCDC40-215ENST00000576033 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
CCDC40-215ENST00000576033 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
CCDC40-215ENST00000576033 Q5VV11 94 aa3.78□□□□□ -1.8
CCDC40-215ENST00000576033 PSPHP1O15172 72 aa3.75□□□□□ -1.81
CCDC40-215ENST00000576033 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
CCDC40-215ENST00000576033 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
CCDC40-215ENST00000576033 LCA10Q71F78 164 aa3.74□□□□□ -1.81
CCDC40-215ENST00000576033 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
CCDC40-215ENST00000576033 S4R3F8 94 aa3.73□□□□□ -1.81
CCDC40-215ENST00000576033 USH2AO75445 5202 aa3.72□□□□□ -1.81
CCDC40-215ENST00000576033 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CCDC40-215ENST00000576033 A0A1B0GU69 56 aa3.7□□□□□ -1.82
CCDC40-215ENST00000576033 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
CCDC40-215ENST00000576033 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
CCDC40-215ENST00000576033 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
CCDC40-215ENST00000576033 A6NED7 52 aa3.63□□□□□ -1.83
CCDC40-215ENST00000576033 SEC61GP60059 68 aa3.63□□□□□ -1.83
CCDC40-215ENST00000576033 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
CCDC40-215ENST00000576033 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
CCDC40-215ENST00000576033 H0YAA0 97 aa3.62□□□□□ -1.83
CCDC40-215ENST00000576033 CSAG1Q6PB30 78 aa3.62□□□□□ -1.83
CCDC40-215ENST00000576033 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
CCDC40-215ENST00000576033 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
CCDC40-215ENST00000576033 A8MU10 97 aa3.61□□□□□ -1.83
CCDC40-215ENST00000576033 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CCDC40-215ENST00000576033 UQCR11O14957 56 aa3.6□□□□□ -1.83
CCDC40-215ENST00000576033 A0A1B0GU33 70 aa3.58□□□□□ -1.84
CCDC40-215ENST00000576033 P0C880 135 aa3.57□□□□□ -1.84
CCDC40-215ENST00000576033 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
CCDC40-215ENST00000576033 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
CCDC40-215ENST00000576033 ADM2Q7Z4H4 148 aa3.55□□□□□ -1.84
CCDC40-215ENST00000576033 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
CCDC40-215ENST00000576033 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
CCDC40-215ENST00000576033 MT1BP07438 61 aa3.53□□□□□ -1.84
CCDC40-215ENST00000576033 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
CCDC40-215ENST00000576033 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
CCDC40-215ENST00000576033 M0QZ58 72 aa3.49□□□□□ -1.85
CCDC40-215ENST00000576033 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
CCDC40-215ENST00000576033 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
CCDC40-215ENST00000576033 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
CCDC40-215ENST00000576033 A6NN06 94 aa3.48□□□□□ -1.85
CCDC40-215ENST00000576033 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
CCDC40-215ENST00000576033 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
CCDC40-215ENST00000576033 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
CCDC40-215ENST00000576033 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
CCDC40-215ENST00000576033 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
CCDC40-215ENST00000576033 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
CCDC40-215ENST00000576033 R4GN34 69 aa3.4□□□□□ -1.87
CCDC40-215ENST00000576033 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
CCDC40-215ENST00000576033 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CCDC40-215ENST00000576033 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
CCDC40-215ENST00000576033 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
CCDC40-215ENST00000576033 K7ERS5 55 aa3.35□□□□□ -1.87
CCDC40-215ENST00000576033 H3BS24 57 aa3.34□□□□□ -1.87
CCDC40-215ENST00000576033 MT1XP80297 61 aa3.34□□□□□ -1.87
CCDC40-215ENST00000576033 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
CCDC40-215ENST00000576033 KMT2DO14686 5537 aa3.31□□□□□ -1.88
CCDC40-215ENST00000576033 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
CCDC40-215ENST00000576033 ROMO1P60602 79 aa3.28□□□□□ -1.88
CCDC40-215ENST00000576033 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
CCDC40-215ENST00000576033 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
CCDC40-215ENST00000576033 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
CCDC40-215ENST00000576033 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
CCDC40-215ENST00000576033 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
CCDC40-215ENST00000576033 NEBP20929 6669 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms