RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
RPAIN-216ENST00000575599 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
RPAIN-216ENST00000575599 Q5W150 140 aa6.76□□□□□ -1.33
RPAIN-216ENST00000575599 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
RPAIN-216ENST00000575599 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
RPAIN-216ENST00000575599 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
RPAIN-216ENST00000575599 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.33
RPAIN-216ENST00000575599 H3BPC8 53 aa6.71□□□□□ -1.33
RPAIN-216ENST00000575599 IGKV2-30P06310 120 aa6.71□□□□□ -1.33
RPAIN-216ENST00000575599 HRES1P13985 223 aa6.71□□□□□ -1.33
RPAIN-216ENST00000575599 LINC00208Q96KT6 92 aa6.71□□□□□ -1.33
RPAIN-216ENST00000575599 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
RPAIN-216ENST00000575599 COX7CP15954 63 aa6.7□□□□□ -1.34
RPAIN-216ENST00000575599 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
RPAIN-216ENST00000575599 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
RPAIN-216ENST00000575599 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
RPAIN-216ENST00000575599 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
RPAIN-216ENST00000575599 SPINK7P58062 85 aa6.68□□□□□ -1.34
RPAIN-216ENST00000575599 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
RPAIN-216ENST00000575599 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
RPAIN-216ENST00000575599 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
RPAIN-216ENST00000575599 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
RPAIN-216ENST00000575599 CCDC179H3BU77 68 aa6.57□□□□□ -1.36
RPAIN-216ENST00000575599 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
RPAIN-216ENST00000575599 NDUFC1O43677 76 aa6.55□□□□□ -1.36
RPAIN-216ENST00000575599 C4orf26Q17RF5 130 aa6.52□□□□□ -1.37
RPAIN-216ENST00000575599 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
RPAIN-216ENST00000575599 MT2AP02795 61 aa6.45□□□□□ -1.38
RPAIN-216ENST00000575599 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
RPAIN-216ENST00000575599 H7BZZ5 65 aa6.44□□□□□ -1.38
RPAIN-216ENST00000575599 SPANXA2-OT1Q8N9U9 137 aa6.44□□□□□ -1.38
RPAIN-216ENST00000575599 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
RPAIN-216ENST00000575599 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
RPAIN-216ENST00000575599 A8MUN3 132 aa6.42□□□□□ -1.38
RPAIN-216ENST00000575599 MT1FP04733 61 aa6.41□□□□□ -1.38
RPAIN-216ENST00000575599 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
RPAIN-216ENST00000575599 ACYP2P14621 99 aa6.38□□□□□ -1.39
RPAIN-216ENST00000575599 TMEM258P61165 79 aa6.38□□□□□ -1.39
RPAIN-216ENST00000575599 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
RPAIN-216ENST00000575599 ATP5EP56381 51 aaPredicted RBP6.37□□□□□ -1.39
RPAIN-216ENST00000575599 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
RPAIN-216ENST00000575599 S4R3F8 94 aa6.31□□□□□ -1.4
RPAIN-216ENST00000575599 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
RPAIN-216ENST00000575599 USH2AO75445 5202 aa6.26□□□□□ -1.41
RPAIN-216ENST00000575599 COA5Q86WW8 74 aa6.26□□□□□ -1.41
RPAIN-216ENST00000575599 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
RPAIN-216ENST00000575599 LCA10Q71F78 164 aa6.23□□□□□ -1.41
RPAIN-216ENST00000575599 SSPOA2VEC9 5147 aa6.21□□□□□ -1.42
RPAIN-216ENST00000575599 CSAG1Q6PB30 78 aa6.2□□□□□ -1.42
RPAIN-216ENST00000575599 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
RPAIN-216ENST00000575599 SERP1Q9Y6X1 66 aa6.18□□□□□ -1.42
RPAIN-216ENST00000575599 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.18□□□□□ -1.42
RPAIN-216ENST00000575599 SEC61GP60059 68 aa6.05□□□□□ -1.44
RPAIN-216ENST00000575599 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
RPAIN-216ENST00000575599 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
RPAIN-216ENST00000575599 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
RPAIN-216ENST00000575599 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
RPAIN-216ENST00000575599 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
RPAIN-216ENST00000575599 H0YAA0 97 aa5.99□□□□□ -1.45
RPAIN-216ENST00000575599 V9GYY9 64 aa5.97□□□□□ -1.45
RPAIN-216ENST00000575599 A0A1B0GU69 56 aa5.96□□□□□ -1.45
RPAIN-216ENST00000575599 PRR15LQ9BU68 103 aa5.96□□□□□ -1.45
RPAIN-216ENST00000575599 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
RPAIN-216ENST00000575599 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
RPAIN-216ENST00000575599 Q5VV11 94 aa5.93□□□□□ -1.46
RPAIN-216ENST00000575599 MT1BP07438 61 aa5.9□□□□□ -1.47
RPAIN-216ENST00000575599 Q1T7F1 81 aa5.9□□□□□ -1.47
RPAIN-216ENST00000575599 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
RPAIN-216ENST00000575599 CRIPTQ9P021 101 aa5.9□□□□□ -1.47
RPAIN-216ENST00000575599 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
RPAIN-216ENST00000575599 P0C880 135 aa5.88□□□□□ -1.47
RPAIN-216ENST00000575599 A0A1B0GU33 70 aa5.83□□□□□ -1.48
RPAIN-216ENST00000575599 PSPHP1O15172 72 aa5.83□□□□□ -1.48
RPAIN-216ENST00000575599 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
RPAIN-216ENST00000575599 KRTAP5-11Q6L8G4 156 aa5.82□□□□□ -1.48
RPAIN-216ENST00000575599 R4GN34 69 aa5.82□□□□□ -1.48
RPAIN-216ENST00000575599 A6NN06 94 aa5.81□□□□□ -1.48
RPAIN-216ENST00000575599 M0QZ58 72 aa5.8□□□□□ -1.48
RPAIN-216ENST00000575599 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
RPAIN-216ENST00000575599 UQCR11O14957 56 aa5.74□□□□□ -1.49
RPAIN-216ENST00000575599 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
RPAIN-216ENST00000575599 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
RPAIN-216ENST00000575599 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
RPAIN-216ENST00000575599 A6NED7 52 aa5.69□□□□□ -1.5
RPAIN-216ENST00000575599 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
RPAIN-216ENST00000575599 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
RPAIN-216ENST00000575599 A0A0D9SG42 100 aa5.65□□□□□ -1.51
RPAIN-216ENST00000575599 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
RPAIN-216ENST00000575599 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
RPAIN-216ENST00000575599 A8MU10 97 aa5.58□□□□□ -1.52
RPAIN-216ENST00000575599 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
RPAIN-216ENST00000575599 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
RPAIN-216ENST00000575599 MT1XP80297 61 aa5.56□□□□□ -1.52
RPAIN-216ENST00000575599 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
RPAIN-216ENST00000575599 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
RPAIN-216ENST00000575599 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
RPAIN-216ENST00000575599 K7ERS5 55 aa5.52□□□□□ -1.53
RPAIN-216ENST00000575599 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
RPAIN-216ENST00000575599 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
RPAIN-216ENST00000575599 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms