RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
LITAF-216ENST00000574848 ACYP2P14621 99 aa5.5□□□□□ -1.53
LITAF-216ENST00000574848 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
LITAF-216ENST00000574848 ATP11AUNQ6ZP68 121 aa5.5□□□□□ -1.53
LITAF-216ENST00000574848 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
LITAF-216ENST00000574848 COA5Q86WW8 74 aa5.48□□□□□ -1.53
LITAF-216ENST00000574848 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
LITAF-216ENST00000574848 V9GYY9 64 aa5.48□□□□□ -1.53
LITAF-216ENST00000574848 A8MUN3 132 aa5.46□□□□□ -1.54
LITAF-216ENST00000574848 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
LITAF-216ENST00000574848 M0R2T5 61 aa5.43□□□□□ -1.54
LITAF-216ENST00000574848 SPINK7P58062 85 aa5.42□□□□□ -1.54
LITAF-216ENST00000574848 Q1T7F1 81 aa5.42□□□□□ -1.54
LITAF-216ENST00000574848 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
LITAF-216ENST00000574848 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
LITAF-216ENST00000574848 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
LITAF-216ENST00000574848 C4orf26Q17RF5 130 aa5.36□□□□□ -1.55
LITAF-216ENST00000574848 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
LITAF-216ENST00000574848 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
LITAF-216ENST00000574848 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
LITAF-216ENST00000574848 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
LITAF-216ENST00000574848 PSPHP1O15172 72 aa5.27□□□□□ -1.57
LITAF-216ENST00000574848 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
LITAF-216ENST00000574848 A0A1B0GU69 56 aa5.23□□□□□ -1.57
LITAF-216ENST00000574848 SEC61GP60059 68 aa5.23□□□□□ -1.57
LITAF-216ENST00000574848 MT2AP02795 61 aa5.22□□□□□ -1.57
LITAF-216ENST00000574848 Q5VV11 94 aa5.22□□□□□ -1.57
LITAF-216ENST00000574848 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
LITAF-216ENST00000574848 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
LITAF-216ENST00000574848 A6NED7 52 aa5.18□□□□□ -1.58
LITAF-216ENST00000574848 MT1FP04733 61 aa5.18□□□□□ -1.58
LITAF-216ENST00000574848 USH2AO75445 5202 aa5.18□□□□□ -1.58
LITAF-216ENST00000574848 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
LITAF-216ENST00000574848 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
LITAF-216ENST00000574848 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
LITAF-216ENST00000574848 S4R3F8 94 aa5.17□□□□□ -1.58
LITAF-216ENST00000574848 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
LITAF-216ENST00000574848 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
LITAF-216ENST00000574848 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
LITAF-216ENST00000574848 UQCR11O14957 56 aa5.11□□□□□ -1.59
LITAF-216ENST00000574848 LCA10Q71F78 164 aa5.11□□□□□ -1.59
LITAF-216ENST00000574848 KRTAP10-10P60014 251 aa5.1□□□□□ -1.59
LITAF-216ENST00000574848 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
LITAF-216ENST00000574848 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
LITAF-216ENST00000574848 H3BS24 57 aa5.05□□□□□ -1.6
LITAF-216ENST00000574848 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
LITAF-216ENST00000574848 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
LITAF-216ENST00000574848 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
LITAF-216ENST00000574848 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
LITAF-216ENST00000574848 A0A1B0GU33 70 aa5.02□□□□□ -1.61
LITAF-216ENST00000574848 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
LITAF-216ENST00000574848 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
LITAF-216ENST00000574848 H0YAA0 97 aa4.97□□□□□ -1.61
LITAF-216ENST00000574848 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
LITAF-216ENST00000574848 A8MU10 97 aa4.92□□□□□ -1.62
LITAF-216ENST00000574848 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
LITAF-216ENST00000574848 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
LITAF-216ENST00000574848 K7ERS5 55 aa4.89□□□□□ -1.63
LITAF-216ENST00000574848 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
LITAF-216ENST00000574848 M0QZ58 72 aa4.86□□□□□ -1.63
LITAF-216ENST00000574848 P0C880 135 aa4.85□□□□□ -1.63
LITAF-216ENST00000574848 A6NN06 94 aa4.83□□□□□ -1.64
LITAF-216ENST00000574848 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
LITAF-216ENST00000574848 R4GN34 69 aa4.78□□□□□ -1.64
LITAF-216ENST00000574848 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
LITAF-216ENST00000574848 MT1BP07438 61 aa4.76□□□□□ -1.65
LITAF-216ENST00000574848 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
LITAF-216ENST00000574848 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
LITAF-216ENST00000574848 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
LITAF-216ENST00000574848 A0A0D9SG42 100 aa4.75□□□□□ -1.65
LITAF-216ENST00000574848 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
LITAF-216ENST00000574848 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
LITAF-216ENST00000574848 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
LITAF-216ENST00000574848 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
LITAF-216ENST00000574848 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
LITAF-216ENST00000574848 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
LITAF-216ENST00000574848 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
LITAF-216ENST00000574848 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
LITAF-216ENST00000574848 ROMO1P60602 79 aa4.61□□□□□ -1.67
LITAF-216ENST00000574848 NEBP20929 6669 aa4.53□□□□□ -1.68
LITAF-216ENST00000574848 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
LITAF-216ENST00000574848 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
LITAF-216ENST00000574848 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
LITAF-216ENST00000574848 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
LITAF-216ENST00000574848 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
LITAF-216ENST00000574848 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
LITAF-216ENST00000574848 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
LITAF-216ENST00000574848 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
LITAF-216ENST00000574848 MT1XP80297 61 aa4.45□□□□□ -1.7
LITAF-216ENST00000574848 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
LITAF-216ENST00000574848 KMT2DO14686 5537 aa4.44□□□□□ -1.7
LITAF-216ENST00000574848 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
LITAF-216ENST00000574848 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
LITAF-216ENST00000574848 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
LITAF-216ENST00000574848 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
LITAF-216ENST00000574848 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
LITAF-216ENST00000574848 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
LITAF-216ENST00000574848 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
LITAF-216ENST00000574848 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
LITAF-216ENST00000574848 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms