RNA–Protein interactions for RNA: ENST00000574293.1

GSE1-214, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-214ENST00000574293 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
GSE1-214ENST00000574293 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
GSE1-214ENST00000574293 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
GSE1-214ENST00000574293 LCE2BO14633 110 aa7.24□□□□□ -1.25
GSE1-214ENST00000574293 NDUFC1O43677 76 aa7.24□□□□□ -1.25
GSE1-214ENST00000574293 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
GSE1-214ENST00000574293 SNURFQ9Y675 71 aa7.21□□□□□ -1.26
GSE1-214ENST00000574293 USH2AO75445 5202 aa7.2□□□□□ -1.26
GSE1-214ENST00000574293 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
GSE1-214ENST00000574293 C20orf197Q8N268 126 aa7.17□□□□□ -1.26
GSE1-214ENST00000574293 ACYP2P14621 99 aa7.11□□□□□ -1.27
GSE1-214ENST00000574293 H0YAA0 97 aa7.08□□□□□ -1.28
GSE1-214ENST00000574293 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
GSE1-214ENST00000574293 COX7CP15954 63 aa7.07□□□□□ -1.28
GSE1-214ENST00000574293 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
GSE1-214ENST00000574293 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
GSE1-214ENST00000574293 SPANXA2-OT1Q8N9U9 137 aa7.03□□□□□ -1.28
GSE1-214ENST00000574293 SPRR2GQ9BYE4 73 aa7.01□□□□□ -1.29
GSE1-214ENST00000574293 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
GSE1-214ENST00000574293 CHKB-CPT1BH3BT56 60 aa6.99□□□□□ -1.29
GSE1-214ENST00000574293 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
GSE1-214ENST00000574293 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.3
GSE1-214ENST00000574293 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
GSE1-214ENST00000574293 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
GSE1-214ENST00000574293 Q5VV11 94 aa6.93□□□□□ -1.3
GSE1-214ENST00000574293 P0C880 135 aa6.92□□□□□ -1.3
GSE1-214ENST00000574293 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
GSE1-214ENST00000574293 MT1BP07438 61 aa6.91□□□□□ -1.3
GSE1-214ENST00000574293 SVIPQ8NHG7 77 aa6.91□□□□□ -1.3
GSE1-214ENST00000574293 H7BZZ5 65 aa6.89□□□□□ -1.31
GSE1-214ENST00000574293 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
GSE1-214ENST00000574293 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
GSE1-214ENST00000574293 COA5Q86WW8 74 aa6.85□□□□□ -1.31
GSE1-214ENST00000574293 R4GN34 69 aa6.85□□□□□ -1.31
GSE1-214ENST00000574293 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
GSE1-214ENST00000574293 M0QZ58 72 aa6.81□□□□□ -1.32
GSE1-214ENST00000574293 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
GSE1-214ENST00000574293 A6NN06 94 aa6.74□□□□□ -1.33
GSE1-214ENST00000574293 LINC01554Q52M75 96 aa6.72□□□□□ -1.33
GSE1-214ENST00000574293 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
GSE1-214ENST00000574293 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
GSE1-214ENST00000574293 SEC61GP60059 68 aa6.64□□□□□ -1.35
GSE1-214ENST00000574293 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
GSE1-214ENST00000574293 SERP1Q9Y6X1 66 aa6.63□□□□□ -1.35
GSE1-214ENST00000574293 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
GSE1-214ENST00000574293 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
GSE1-214ENST00000574293 TMEM258P61165 79 aa6.56□□□□□ -1.36
GSE1-214ENST00000574293 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
GSE1-214ENST00000574293 MT1XP80297 61 aa6.54□□□□□ -1.36
GSE1-214ENST00000574293 PCP4P48539 62 aa6.53□□□□□ -1.36
GSE1-214ENST00000574293 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
GSE1-214ENST00000574293 A0A1B0GU33 70 aa6.5□□□□□ -1.37
GSE1-214ENST00000574293 A0A1B0GU69 56 aa6.5□□□□□ -1.37
GSE1-214ENST00000574293 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
GSE1-214ENST00000574293 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
GSE1-214ENST00000574293 A0A0D9SG42 100 aa6.43□□□□□ -1.38
GSE1-214ENST00000574293 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
GSE1-214ENST00000574293 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
GSE1-214ENST00000574293 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
GSE1-214ENST00000574293 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
GSE1-214ENST00000574293 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
GSE1-214ENST00000574293 SMIM26A0A096LP01 95 aa6.31□□□□□ -1.4
GSE1-214ENST00000574293 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
GSE1-214ENST00000574293 A8MU10 97 aa6.27□□□□□ -1.41
GSE1-214ENST00000574293 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
GSE1-214ENST00000574293 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
GSE1-214ENST00000574293 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
GSE1-214ENST00000574293 KMT2DO14686 5537 aa6.22□□□□□ -1.41
GSE1-214ENST00000574293 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
GSE1-214ENST00000574293 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
GSE1-214ENST00000574293 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
GSE1-214ENST00000574293 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
GSE1-214ENST00000574293 UQCR11O14957 56 aa6.17□□□□□ -1.42
GSE1-214ENST00000574293 V9GYY9 64 aa6.16□□□□□ -1.42
GSE1-214ENST00000574293 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
GSE1-214ENST00000574293 Q1T7F1 81 aa6.13□□□□□ -1.43
GSE1-214ENST00000574293 PSPHP1O15172 72 aa6.12□□□□□ -1.43
GSE1-214ENST00000574293 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
GSE1-214ENST00000574293 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
GSE1-214ENST00000574293 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
GSE1-214ENST00000574293 NEBP20929 6669 aa6□□□□□ -1.45
GSE1-214ENST00000574293 SPRR2EP22531 72 aa5.98□□□□□ -1.45
GSE1-214ENST00000574293 SPRR2BP35325 72 aa5.98□□□□□ -1.45
GSE1-214ENST00000574293 SPRR2AP35326 72 aa5.98□□□□□ -1.45
GSE1-214ENST00000574293 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
GSE1-214ENST00000574293 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
GSE1-214ENST00000574293 A6NED7 52 aa5.92□□□□□ -1.46
GSE1-214ENST00000574293 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
GSE1-214ENST00000574293 TNP1P09430 55 aa5.91□□□□□ -1.46
GSE1-214ENST00000574293 K7ERS5 55 aa5.9□□□□□ -1.46
GSE1-214ENST00000574293 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
GSE1-214ENST00000574293 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
GSE1-214ENST00000574293 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
GSE1-214ENST00000574293 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
GSE1-214ENST00000574293 MT1EP04732 61 aa5.78□□□□□ -1.48
GSE1-214ENST00000574293 SPRR2DP22532 72 aa5.78□□□□□ -1.48
GSE1-214ENST00000574293 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
GSE1-214ENST00000574293 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
GSE1-214ENST00000574293 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
GSE1-214ENST00000574293 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms