RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 H3BPC8 53 aa6.68□□□□□ -1.34
TVP23A-208ENST00000573857 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
TVP23A-208ENST00000573857 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
TVP23A-208ENST00000573857 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
TVP23A-208ENST00000573857 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
TVP23A-208ENST00000573857 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
TVP23A-208ENST00000573857 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
TVP23A-208ENST00000573857 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
TVP23A-208ENST00000573857 A8MUN3 132 aa6.55□□□□□ -1.36
TVP23A-208ENST00000573857 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
TVP23A-208ENST00000573857 SERP2Q8N6R1 65 aa6.5□□□□□ -1.37
TVP23A-208ENST00000573857 S4R3F8 94 aa6.5□□□□□ -1.37
TVP23A-208ENST00000573857 NEBP20929 6669 aa6.5□□□□□ -1.37
TVP23A-208ENST00000573857 KLKP1Q107X0 134 aa6.49□□□□□ -1.37
TVP23A-208ENST00000573857 MT1BP07438 61 aa6.46□□□□□ -1.38
TVP23A-208ENST00000573857 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
TVP23A-208ENST00000573857 A6NN06 94 aa6.45□□□□□ -1.38
TVP23A-208ENST00000573857 Q5VV11 94 aa6.44□□□□□ -1.38
TVP23A-208ENST00000573857 LCA10Q71F78 164 aa6.44□□□□□ -1.38
TVP23A-208ENST00000573857 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
TVP23A-208ENST00000573857 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
TVP23A-208ENST00000573857 MUC12Q9UKN1 5478 aa6.41□□□□□ -1.38
TVP23A-208ENST00000573857 NDUFC1O43677 76 aa6.4□□□□□ -1.38
TVP23A-208ENST00000573857 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
TVP23A-208ENST00000573857 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
TVP23A-208ENST00000573857 COX7CP15954 63 aa6.37□□□□□ -1.39
TVP23A-208ENST00000573857 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
TVP23A-208ENST00000573857 ACYP2P14621 99 aa6.35□□□□□ -1.39
TVP23A-208ENST00000573857 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
TVP23A-208ENST00000573857 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
TVP23A-208ENST00000573857 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
TVP23A-208ENST00000573857 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
TVP23A-208ENST00000573857 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
TVP23A-208ENST00000573857 H0YAA0 97 aa6.26□□□□□ -1.41
TVP23A-208ENST00000573857 CRIPTQ9P021 101 aa6.26□□□□□ -1.41
TVP23A-208ENST00000573857 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
TVP23A-208ENST00000573857 KMT2DO14686 5537 aa6.24□□□□□ -1.41
TVP23A-208ENST00000573857 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
TVP23A-208ENST00000573857 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
TVP23A-208ENST00000573857 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
TVP23A-208ENST00000573857 H7BZZ5 65 aa6.17□□□□□ -1.42
TVP23A-208ENST00000573857 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
TVP23A-208ENST00000573857 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
TVP23A-208ENST00000573857 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
TVP23A-208ENST00000573857 COA5Q86WW8 74 aa6.08□□□□□ -1.44
TVP23A-208ENST00000573857 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
TVP23A-208ENST00000573857 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
TVP23A-208ENST00000573857 MT1XP80297 61 aa6.02□□□□□ -1.45
TVP23A-208ENST00000573857 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
TVP23A-208ENST00000573857 R4GN34 69 aa6.01□□□□□ -1.45
TVP23A-208ENST00000573857 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
TVP23A-208ENST00000573857 TMEM258P61165 79 aa5.99□□□□□ -1.45
TVP23A-208ENST00000573857 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
TVP23A-208ENST00000573857 P0C880 135 aa5.98□□□□□ -1.45
TVP23A-208ENST00000573857 SEC61GP60059 68 aa5.98□□□□□ -1.45
TVP23A-208ENST00000573857 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
TVP23A-208ENST00000573857 SPRR2EP22531 72 aa5.97□□□□□ -1.45
TVP23A-208ENST00000573857 SPRR2BP35325 72 aa5.97□□□□□ -1.45
TVP23A-208ENST00000573857 SPRR2AP35326 72 aa5.97□□□□□ -1.45
TVP23A-208ENST00000573857 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
TVP23A-208ENST00000573857 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
TVP23A-208ENST00000573857 M0QZ58 72 aa5.93□□□□□ -1.46
TVP23A-208ENST00000573857 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
TVP23A-208ENST00000573857 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
TVP23A-208ENST00000573857 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
TVP23A-208ENST00000573857 A0A1B0GU69 56 aa5.82□□□□□ -1.48
TVP23A-208ENST00000573857 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
TVP23A-208ENST00000573857 LINC01554Q52M75 96 aa5.8□□□□□ -1.48
TVP23A-208ENST00000573857 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
TVP23A-208ENST00000573857 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
TVP23A-208ENST00000573857 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
TVP23A-208ENST00000573857 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
TVP23A-208ENST00000573857 A0A1B0GU33 70 aa5.77□□□□□ -1.49
TVP23A-208ENST00000573857 SPRR2DP22532 72 aa5.77□□□□□ -1.49
TVP23A-208ENST00000573857 PCP4P48539 62 aa5.77□□□□□ -1.49
TVP23A-208ENST00000573857 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
TVP23A-208ENST00000573857 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
TVP23A-208ENST00000573857 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
TVP23A-208ENST00000573857 V9GYY9 64 aa5.68□□□□□ -1.5
TVP23A-208ENST00000573857 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
TVP23A-208ENST00000573857 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
TVP23A-208ENST00000573857 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
TVP23A-208ENST00000573857 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
TVP23A-208ENST00000573857 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
TVP23A-208ENST00000573857 A0A0D9SG42 100 aa5.59□□□□□ -1.51
TVP23A-208ENST00000573857 UQCR11O14957 56 aa5.58□□□□□ -1.52
TVP23A-208ENST00000573857 Q1T7F1 81 aa5.58□□□□□ -1.52
TVP23A-208ENST00000573857 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
TVP23A-208ENST00000573857 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
TVP23A-208ENST00000573857 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
TVP23A-208ENST00000573857 A8MU10 97 aa5.46□□□□□ -1.54
TVP23A-208ENST00000573857 PSPHP1O15172 72 aa5.46□□□□□ -1.54
TVP23A-208ENST00000573857 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
TVP23A-208ENST00000573857 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
TVP23A-208ENST00000573857 K7ERS5 55 aa5.38□□□□□ -1.55
TVP23A-208ENST00000573857 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
TVP23A-208ENST00000573857 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
TVP23A-208ENST00000573857 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
TVP23A-208ENST00000573857 A6NED7 52 aa5.35□□□□□ -1.55
TVP23A-208ENST00000573857 MT1EP04732 61 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms