RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
RPAIN-213ENST00000573577 C4orf26Q17RF5 130 aa6.66□□□□□ -1.34
RPAIN-213ENST00000573577 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
RPAIN-213ENST00000573577 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
RPAIN-213ENST00000573577 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
RPAIN-213ENST00000573577 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
RPAIN-213ENST00000573577 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
RPAIN-213ENST00000573577 MP68P56378 58 aa6.63□□□□□ -1.35
RPAIN-213ENST00000573577 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
RPAIN-213ENST00000573577 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
RPAIN-213ENST00000573577 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
RPAIN-213ENST00000573577 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
RPAIN-213ENST00000573577 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
RPAIN-213ENST00000573577 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
RPAIN-213ENST00000573577 H3BPC8 53 aa6.57□□□□□ -1.36
RPAIN-213ENST00000573577 MT2AP02795 61 aa6.57□□□□□ -1.36
RPAIN-213ENST00000573577 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
RPAIN-213ENST00000573577 KRTAP4-2Q9BYR5 136 aa6.56□□□□□ -1.36
RPAIN-213ENST00000573577 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
RPAIN-213ENST00000573577 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
RPAIN-213ENST00000573577 MT1FP04733 61 aa6.52□□□□□ -1.37
RPAIN-213ENST00000573577 S4R3F8 94 aa6.51□□□□□ -1.37
RPAIN-213ENST00000573577 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
RPAIN-213ENST00000573577 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
RPAIN-213ENST00000573577 USH2AO75445 5202 aa6.48□□□□□ -1.37
RPAIN-213ENST00000573577 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
RPAIN-213ENST00000573577 A8MUN3 132 aa6.46□□□□□ -1.38
RPAIN-213ENST00000573577 LCA10Q71F78 164 aa6.44□□□□□ -1.38
RPAIN-213ENST00000573577 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
RPAIN-213ENST00000573577 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
RPAIN-213ENST00000573577 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
RPAIN-213ENST00000573577 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
RPAIN-213ENST00000573577 ANAPC13Q9BS18 74 aa6.38□□□□□ -1.39
RPAIN-213ENST00000573577 NDUFC1O43677 76 aa6.36□□□□□ -1.39
RPAIN-213ENST00000573577 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
RPAIN-213ENST00000573577 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
RPAIN-213ENST00000573577 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
RPAIN-213ENST00000573577 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
RPAIN-213ENST00000573577 COX7CP15954 63 aa6.27□□□□□ -1.41
RPAIN-213ENST00000573577 ACYP2P14621 99 aa6.26□□□□□ -1.41
RPAIN-213ENST00000573577 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
RPAIN-213ENST00000573577 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
RPAIN-213ENST00000573577 H0YAA0 97 aa6.21□□□□□ -1.42
RPAIN-213ENST00000573577 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
RPAIN-213ENST00000573577 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
RPAIN-213ENST00000573577 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
RPAIN-213ENST00000573577 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
RPAIN-213ENST00000573577 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
RPAIN-213ENST00000573577 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
RPAIN-213ENST00000573577 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
RPAIN-213ENST00000573577 H7BZZ5 65 aa6.08□□□□□ -1.44
RPAIN-213ENST00000573577 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
RPAIN-213ENST00000573577 TMEM258P61165 79 aa6.03□□□□□ -1.44
RPAIN-213ENST00000573577 Q5VV11 94 aa6.03□□□□□ -1.44
RPAIN-213ENST00000573577 COA5Q86WW8 74 aa6.02□□□□□ -1.45
RPAIN-213ENST00000573577 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
RPAIN-213ENST00000573577 MT1BP07438 61 aa6□□□□□ -1.45
RPAIN-213ENST00000573577 P0C880 135 aa6□□□□□ -1.45
RPAIN-213ENST00000573577 R4GN34 69 aa5.99□□□□□ -1.45
RPAIN-213ENST00000573577 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
RPAIN-213ENST00000573577 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
RPAIN-213ENST00000573577 M0QZ58 72 aa5.94□□□□□ -1.46
RPAIN-213ENST00000573577 A6NN06 94 aa5.9□□□□□ -1.46
RPAIN-213ENST00000573577 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
RPAIN-213ENST00000573577 SEC61GP60059 68 aa5.88□□□□□ -1.47
RPAIN-213ENST00000573577 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
RPAIN-213ENST00000573577 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
RPAIN-213ENST00000573577 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
RPAIN-213ENST00000573577 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
RPAIN-213ENST00000573577 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
RPAIN-213ENST00000573577 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
RPAIN-213ENST00000573577 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
RPAIN-213ENST00000573577 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
RPAIN-213ENST00000573577 A0A1B0GU69 56 aa5.73□□□□□ -1.49
RPAIN-213ENST00000573577 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
RPAIN-213ENST00000573577 A0A1B0GU33 70 aa5.7□□□□□ -1.5
RPAIN-213ENST00000573577 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
RPAIN-213ENST00000573577 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
RPAIN-213ENST00000573577 V9GYY9 64 aa5.68□□□□□ -1.5
RPAIN-213ENST00000573577 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
RPAIN-213ENST00000573577 MT1XP80297 61 aa5.66□□□□□ -1.5
RPAIN-213ENST00000573577 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
RPAIN-213ENST00000573577 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
RPAIN-213ENST00000573577 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
RPAIN-213ENST00000573577 A0A0D9SG42 100 aa5.59□□□□□ -1.51
RPAIN-213ENST00000573577 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
RPAIN-213ENST00000573577 Q1T7F1 81 aa5.56□□□□□ -1.52
RPAIN-213ENST00000573577 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
RPAIN-213ENST00000573577 KMT2DO14686 5537 aa5.55□□□□□ -1.52
RPAIN-213ENST00000573577 NEBP20929 6669 aa5.54□□□□□ -1.52
RPAIN-213ENST00000573577 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
RPAIN-213ENST00000573577 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
RPAIN-213ENST00000573577 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
RPAIN-213ENST00000573577 UQCR11O14957 56 aa5.47□□□□□ -1.53
RPAIN-213ENST00000573577 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
RPAIN-213ENST00000573577 A8MU10 97 aa5.45□□□□□ -1.54
RPAIN-213ENST00000573577 PSPHP1O15172 72 aa5.43□□□□□ -1.54
RPAIN-213ENST00000573577 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
RPAIN-213ENST00000573577 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
RPAIN-213ENST00000573577 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms