RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
LITAF-212ENST00000573332 SERP2Q8N6R1 65 aa8.07□□□□□ -1.12
LITAF-212ENST00000573332 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
LITAF-212ENST00000573332 NDUFC1O43677 76 aa8.02□□□□□ -1.13
LITAF-212ENST00000573332 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
LITAF-212ENST00000573332 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
LITAF-212ENST00000573332 LCE2BO14633 110 aa7.98□□□□□ -1.13
LITAF-212ENST00000573332 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
LITAF-212ENST00000573332 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
LITAF-212ENST00000573332 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
LITAF-212ENST00000573332 H0YAA0 97 aa7.92□□□□□ -1.14
LITAF-212ENST00000573332 ACYP2P14621 99 aa7.9□□□□□ -1.14
LITAF-212ENST00000573332 COX7CP15954 63 aa7.9□□□□□ -1.14
LITAF-212ENST00000573332 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
LITAF-212ENST00000573332 USH2AO75445 5202 aa7.88□□□□□ -1.15
LITAF-212ENST00000573332 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
LITAF-212ENST00000573332 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
LITAF-212ENST00000573332 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
LITAF-212ENST00000573332 ADM2Q7Z4H4 148 aa7.77□□□□□ -1.17
LITAF-212ENST00000573332 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
LITAF-212ENST00000573332 SPTSSBQ8NFR3 76 aa7.74□□□□□ -1.17
LITAF-212ENST00000573332 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
LITAF-212ENST00000573332 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
LITAF-212ENST00000573332 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
LITAF-212ENST00000573332 H7BZZ5 65 aa7.71□□□□□ -1.18
LITAF-212ENST00000573332 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
LITAF-212ENST00000573332 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
LITAF-212ENST00000573332 MT1BP07438 61 aa7.65□□□□□ -1.18
LITAF-212ENST00000573332 P0C880 135 aa7.64□□□□□ -1.19
LITAF-212ENST00000573332 Q5VV11 94 aa7.64□□□□□ -1.19
LITAF-212ENST00000573332 COA5Q86WW8 74 aa7.61□□□□□ -1.19
LITAF-212ENST00000573332 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
LITAF-212ENST00000573332 R4GN34 69 aa7.56□□□□□ -1.2
LITAF-212ENST00000573332 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
LITAF-212ENST00000573332 M0QZ58 72 aa7.5□□□□□ -1.21
LITAF-212ENST00000573332 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
LITAF-212ENST00000573332 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
LITAF-212ENST00000573332 A6NN06 94 aa7.41□□□□□ -1.22
LITAF-212ENST00000573332 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
LITAF-212ENST00000573332 SEC61GP60059 68 aa7.36□□□□□ -1.23
LITAF-212ENST00000573332 TMEM258P61165 79 aa7.36□□□□□ -1.23
LITAF-212ENST00000573332 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
LITAF-212ENST00000573332 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
LITAF-212ENST00000573332 SERP1Q9Y6X1 66 aa7.34□□□□□ -1.23
LITAF-212ENST00000573332 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
LITAF-212ENST00000573332 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
LITAF-212ENST00000573332 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
LITAF-212ENST00000573332 MT1XP80297 61 aa7.24□□□□□ -1.25
LITAF-212ENST00000573332 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
LITAF-212ENST00000573332 A0A1B0GU69 56 aa7.21□□□□□ -1.26
LITAF-212ENST00000573332 A0A1B0GU33 70 aa7.2□□□□□ -1.26
LITAF-212ENST00000573332 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
LITAF-212ENST00000573332 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
LITAF-212ENST00000573332 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
LITAF-212ENST00000573332 KRTAP6-3Q3LI67 103 aa7.08□□□□□ -1.28
LITAF-212ENST00000573332 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
LITAF-212ENST00000573332 A0A0D9SG42 100 aa7.04□□□□□ -1.28
LITAF-212ENST00000573332 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
LITAF-212ENST00000573332 PCP4P48539 62 aa7.02□□□□□ -1.29
LITAF-212ENST00000573332 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
LITAF-212ENST00000573332 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
LITAF-212ENST00000573332 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
LITAF-212ENST00000573332 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
LITAF-212ENST00000573332 A8MU10 97 aa6.91□□□□□ -1.3
LITAF-212ENST00000573332 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
LITAF-212ENST00000573332 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
LITAF-212ENST00000573332 V9GYY9 64 aa6.91□□□□□ -1.3
LITAF-212ENST00000573332 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
LITAF-212ENST00000573332 UQCR11O14957 56 aa6.89□□□□□ -1.31
LITAF-212ENST00000573332 Q1T7F1 81 aa6.88□□□□□ -1.31
LITAF-212ENST00000573332 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
LITAF-212ENST00000573332 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
LITAF-212ENST00000573332 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
LITAF-212ENST00000573332 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
LITAF-212ENST00000573332 KMT2DO14686 5537 aa6.79□□□□□ -1.32
LITAF-212ENST00000573332 PSPHP1O15172 72 aa6.76□□□□□ -1.33
LITAF-212ENST00000573332 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
LITAF-212ENST00000573332 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
LITAF-212ENST00000573332 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
LITAF-212ENST00000573332 NEBP20929 6669 aa6.65□□□□□ -1.34
LITAF-212ENST00000573332 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
LITAF-212ENST00000573332 A6NED7 52 aa6.57□□□□□ -1.36
LITAF-212ENST00000573332 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
LITAF-212ENST00000573332 K7ERS5 55 aa6.55□□□□□ -1.36
LITAF-212ENST00000573332 TNP1P09430 55 aa6.55□□□□□ -1.36
LITAF-212ENST00000573332 SPRR2EP22531 72 aa6.54□□□□□ -1.36
LITAF-212ENST00000573332 SPRR2BP35325 72 aa6.54□□□□□ -1.36
LITAF-212ENST00000573332 SPRR2AP35326 72 aa6.54□□□□□ -1.36
LITAF-212ENST00000573332 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
LITAF-212ENST00000573332 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
LITAF-212ENST00000573332 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
LITAF-212ENST00000573332 MT1EP04732 61 aa6.4□□□□□ -1.38
LITAF-212ENST00000573332 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
LITAF-212ENST00000573332 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
LITAF-212ENST00000573332 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
LITAF-212ENST00000573332 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
LITAF-212ENST00000573332 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
LITAF-212ENST00000573332 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
LITAF-212ENST00000573332 SPRR2DP22532 72 aa6.32□□□□□ -1.4
LITAF-212ENST00000573332 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms