RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 LINC01554Q52M75 96 aa10.85□□□□□ -0.67
SPNS2-203ENST00000570979 DMAC1Q96GE9 116 aa10.81□□□□□ -0.68
SPNS2-203ENST00000570979 RETNLBQ9BQ08 111 aa10.8□□□□□ -0.68
SPNS2-203ENST00000570979 SPATA8Q6RVD6 105 aa10.77□□□□□ -0.69
SPNS2-203ENST00000570979 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
SPNS2-203ENST00000570979 IGKV2D-30A0A075B6S6 120 aa10.75□□□□□ -0.69
SPNS2-203ENST00000570979 A8MUU9 505 aa10.75□□□□□ -0.69
SPNS2-203ENST00000570979 PRAC1Q96KF2 57 aa10.68□□□□□ -0.7
SPNS2-203ENST00000570979 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
SPNS2-203ENST00000570979 LPAP08519 4548 aa10.66□□□□□ -0.7
SPNS2-203ENST00000570979 C9orf92A6NGG3 77 aa10.64□□□□□ -0.71
SPNS2-203ENST00000570979 A0A1B0GU69 56 aa10.62□□□□□ -0.71
SPNS2-203ENST00000570979 H3BS24 57 aa10.62□□□□□ -0.71
SPNS2-203ENST00000570979 UQCR11O14957 56 aa10.6□□□□□ -0.71
SPNS2-203ENST00000570979 MIR22HGQ0VDD5 57 aa10.57□□□□□ -0.72
SPNS2-203ENST00000570979 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
SPNS2-203ENST00000570979 CSAG1Q6PB30 78 aa10.39□□□□□ -0.75
SPNS2-203ENST00000570979 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
SPNS2-203ENST00000570979 COX6B2Q6YFQ2 88 aa10.31□□□□□ -0.76
SPNS2-203ENST00000570979 MUC2Q02817 5179 aa10.29□□□□□ -0.76
SPNS2-203ENST00000570979 XP32Q5T750 250 aa10.29□□□□□ -0.76
SPNS2-203ENST00000570979 TPRXLQ17RH7 258 aa10.21□□□□□ -0.78
SPNS2-203ENST00000570979 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
SPNS2-203ENST00000570979 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SPNS2-203ENST00000570979 MUC17Q685J3 4493 aa10.16□□□□□ -0.78
SPNS2-203ENST00000570979 ROMO1P60602 79 aa10.14□□□□□ -0.79
SPNS2-203ENST00000570979 FAT4Q6V0I7 4981 aa10.06□□□□□ -0.8
SPNS2-203ENST00000570979 H0YAA0 97 aa9.97□□□□□ -0.81
SPNS2-203ENST00000570979 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
SPNS2-203ENST00000570979 S4R3F8 94 aa9.96□□□□□ -0.82
SPNS2-203ENST00000570979 A0A1B0GU33 70 aa9.94□□□□□ -0.82
SPNS2-203ENST00000570979 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
SPNS2-203ENST00000570979 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
SPNS2-203ENST00000570979 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
SPNS2-203ENST00000570979 K7ERS5 55 aa9.87□□□□□ -0.83
SPNS2-203ENST00000570979 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
SPNS2-203ENST00000570979 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
SPNS2-203ENST00000570979 P0C880 135 aa9.73□□□□□ -0.85
SPNS2-203ENST00000570979 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
SPNS2-203ENST00000570979 KRTAP19-2Q3LHN2 52 aa9.65□□□□□ -0.86
SPNS2-203ENST00000570979 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.87
SPNS2-203ENST00000570979 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
SPNS2-203ENST00000570979 MT1HP80294 61 aa9.52□□□□□ -0.89
SPNS2-203ENST00000570979 M0QZ58 72 aa9.49□□□□□ -0.89
SPNS2-203ENST00000570979 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
SPNS2-203ENST00000570979 KRTAP15-1Q3LI76 137 aa9.45□□□□□ -0.9
SPNS2-203ENST00000570979 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
SPNS2-203ENST00000570979 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
SPNS2-203ENST00000570979 CRIPTQ9P021 101 aa9.38□□□□□ -0.91
SPNS2-203ENST00000570979 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
SPNS2-203ENST00000570979 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
SPNS2-203ENST00000570979 A0A0D9SG42 100 aa9.34□□□□□ -0.91
SPNS2-203ENST00000570979 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
SPNS2-203ENST00000570979 NDUFAF8A1L188 74 aa9.29□□□□□ -0.92
SPNS2-203ENST00000570979 M0R2T5 61 aa9.27□□□□□ -0.92
SPNS2-203ENST00000570979 R4GN34 69 aa9.23□□□□□ -0.93
SPNS2-203ENST00000570979 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.94
SPNS2-203ENST00000570979 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.94
SPNS2-203ENST00000570979 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
SPNS2-203ENST00000570979 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
SPNS2-203ENST00000570979 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
SPNS2-203ENST00000570979 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
SPNS2-203ENST00000570979 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
SPNS2-203ENST00000570979 MT2AP02795 61 aa8.87□□□□□ -0.99
SPNS2-203ENST00000570979 USH2AO75445 5202 aa8.83□□□□□ -1
SPNS2-203ENST00000570979 MT1FP04733 61 aa8.81□□□□□ -1
SPNS2-203ENST00000570979 LUZP6Q538Z0 58 aa8.81□□□□□ -1
SPNS2-203ENST00000570979 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
SPNS2-203ENST00000570979 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
SPNS2-203ENST00000570979 LCE2BO14633 110 aa8.72□□□□□ -1.01
SPNS2-203ENST00000570979 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
SPNS2-203ENST00000570979 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.01
SPNS2-203ENST00000570979 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
SPNS2-203ENST00000570979 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
SPNS2-203ENST00000570979 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
SPNS2-203ENST00000570979 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
SPNS2-203ENST00000570979 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
SPNS2-203ENST00000570979 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
SPNS2-203ENST00000570979 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
SPNS2-203ENST00000570979 TNP1P09430 55 aa8.41□□□□□ -1.06
SPNS2-203ENST00000570979 KRTAP23-1A1A580 65 aa8.38□□□□□ -1.07
SPNS2-203ENST00000570979 KRTAP19-6Q3LI70 58 aa8.38□□□□□ -1.07
SPNS2-203ENST00000570979 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
SPNS2-203ENST00000570979 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
SPNS2-203ENST00000570979 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
SPNS2-203ENST00000570979 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
SPNS2-203ENST00000570979 MT1BP07438 61 aa8.08□□□□□ -1.12
SPNS2-203ENST00000570979 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
SPNS2-203ENST00000570979 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
SPNS2-203ENST00000570979 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
SPNS2-203ENST00000570979 MT1XP80297 61 aa7.89□□□□□ -1.15
SPNS2-203ENST00000570979 INE1O15225 51 aa7.82□□□□□ -1.16
SPNS2-203ENST00000570979 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
SPNS2-203ENST00000570979 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
SPNS2-203ENST00000570979 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
SPNS2-203ENST00000570979 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.17
SPNS2-203ENST00000570979 NEBP20929 6669 aa7.66□□□□□ -1.18
SPNS2-203ENST00000570979 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
SPNS2-203ENST00000570979 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
SPNS2-203ENST00000570979 KMT2DO14686 5537 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms