RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 TMEM258P61165 79 aa5.22□□□□□ -1.57
RBFOX1-220ENST00000570188 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
RBFOX1-220ENST00000570188 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
RBFOX1-220ENST00000570188 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
RBFOX1-220ENST00000570188 PCOTHQ58A44 107 aa5.2□□□□□ -1.58
RBFOX1-220ENST00000570188 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
RBFOX1-220ENST00000570188 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
RBFOX1-220ENST00000570188 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
RBFOX1-220ENST00000570188 ATP11AUNQ6ZP68 121 aa5.18□□□□□ -1.58
RBFOX1-220ENST00000570188 ATP5EP56381 51 aaPredicted RBP5.16□□□□□ -1.58
RBFOX1-220ENST00000570188 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
RBFOX1-220ENST00000570188 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.59
RBFOX1-220ENST00000570188 LPAP08519 4548 aa5.14□□□□□ -1.59
RBFOX1-220ENST00000570188 SPANXA2-OT1Q8N9U9 137 aa5.13□□□□□ -1.59
RBFOX1-220ENST00000570188 HRES1P13985 223 aa5.11□□□□□ -1.59
RBFOX1-220ENST00000570188 SPINK7P58062 85 aa5.1□□□□□ -1.59
RBFOX1-220ENST00000570188 LRP2P98164 4655 aa5.08□□□□□ -1.6
RBFOX1-220ENST00000570188 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
RBFOX1-220ENST00000570188 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
RBFOX1-220ENST00000570188 SERP1Q9Y6X1 66 aa5.05□□□□□ -1.6
RBFOX1-220ENST00000570188 C4orf26Q17RF5 130 aa5.03□□□□□ -1.6
RBFOX1-220ENST00000570188 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
RBFOX1-220ENST00000570188 ACYP2P14621 99 aa5□□□□□ -1.61
RBFOX1-220ENST00000570188 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
RBFOX1-220ENST00000570188 COA5Q86WW8 74 aa5□□□□□ -1.61
RBFOX1-220ENST00000570188 HERC1Q15751 4861 aa4.99□□□□□ -1.61
RBFOX1-220ENST00000570188 A8MUN3 132 aa4.99□□□□□ -1.61
RBFOX1-220ENST00000570188 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
RBFOX1-220ENST00000570188 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
RBFOX1-220ENST00000570188 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
RBFOX1-220ENST00000570188 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
RBFOX1-220ENST00000570188 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
RBFOX1-220ENST00000570188 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
RBFOX1-220ENST00000570188 MT3P25713 68 aa4.9□□□□□ -1.63
RBFOX1-220ENST00000570188 SEC61GP60059 68 aa4.89□□□□□ -1.63
RBFOX1-220ENST00000570188 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
RBFOX1-220ENST00000570188 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
RBFOX1-220ENST00000570188 S4R3F8 94 aa4.85□□□□□ -1.63
RBFOX1-220ENST00000570188 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
RBFOX1-220ENST00000570188 Q1T7F1 81 aa4.81□□□□□ -1.64
RBFOX1-220ENST00000570188 LCA10Q71F78 164 aa4.81□□□□□ -1.64
RBFOX1-220ENST00000570188 V9GYY9 64 aa4.81□□□□□ -1.64
RBFOX1-220ENST00000570188 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
RBFOX1-220ENST00000570188 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
RBFOX1-220ENST00000570188 PRR15LQ9BU68 103 aa4.77□□□□□ -1.65
RBFOX1-220ENST00000570188 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
RBFOX1-220ENST00000570188 PSPHP1O15172 72 aa4.74□□□□□ -1.65
RBFOX1-220ENST00000570188 A0A1B0GU69 56 aa4.73□□□□□ -1.65
RBFOX1-220ENST00000570188 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
RBFOX1-220ENST00000570188 RNF213Q63HN8 5207 aa4.71□□□□□ -1.66
RBFOX1-220ENST00000570188 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
RBFOX1-220ENST00000570188 Q5VV11 94 aa4.7□□□□□ -1.66
RBFOX1-220ENST00000570188 MUC2Q02817 5179 aa4.69□□□□□ -1.66
RBFOX1-220ENST00000570188 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
RBFOX1-220ENST00000570188 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
RBFOX1-220ENST00000570188 ADM2Q7Z4H4 148 aa4.62□□□□□ -1.67
RBFOX1-220ENST00000570188 A6NED7 52 aa4.61□□□□□ -1.67
RBFOX1-220ENST00000570188 H0YAA0 97 aa4.6□□□□□ -1.67
RBFOX1-220ENST00000570188 MT1HP80294 61 aa4.6□□□□□ -1.67
RBFOX1-220ENST00000570188 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
RBFOX1-220ENST00000570188 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
RBFOX1-220ENST00000570188 M0R2T5 61 aa4.58□□□□□ -1.68
RBFOX1-220ENST00000570188 A0A1B0GU33 70 aa4.57□□□□□ -1.68
RBFOX1-220ENST00000570188 UQCR11O14957 56 aa4.57□□□□□ -1.68
RBFOX1-220ENST00000570188 P0C880 135 aa4.57□□□□□ -1.68
RBFOX1-220ENST00000570188 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
RBFOX1-220ENST00000570188 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
RBFOX1-220ENST00000570188 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
RBFOX1-220ENST00000570188 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
RBFOX1-220ENST00000570188 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
RBFOX1-220ENST00000570188 A8MU10 97 aa4.48□□□□□ -1.69
RBFOX1-220ENST00000570188 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
RBFOX1-220ENST00000570188 M0QZ58 72 aa4.46□□□□□ -1.7
RBFOX1-220ENST00000570188 R4GN34 69 aa4.45□□□□□ -1.7
RBFOX1-220ENST00000570188 A0A0D9SG42 100 aa4.42□□□□□ -1.7
RBFOX1-220ENST00000570188 MT2AP02795 61 aa4.42□□□□□ -1.7
RBFOX1-220ENST00000570188 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
RBFOX1-220ENST00000570188 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
RBFOX1-220ENST00000570188 MT1FP04733 61 aa4.4□□□□□ -1.71
RBFOX1-220ENST00000570188 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
RBFOX1-220ENST00000570188 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
RBFOX1-220ENST00000570188 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
RBFOX1-220ENST00000570188 K7ERS5 55 aa4.34□□□□□ -1.71
RBFOX1-220ENST00000570188 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
RBFOX1-220ENST00000570188 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
RBFOX1-220ENST00000570188 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
RBFOX1-220ENST00000570188 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
RBFOX1-220ENST00000570188 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
RBFOX1-220ENST00000570188 A6NN06 94 aa4.27□□□□□ -1.73
RBFOX1-220ENST00000570188 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
RBFOX1-220ENST00000570188 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
RBFOX1-220ENST00000570188 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
RBFOX1-220ENST00000570188 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
RBFOX1-220ENST00000570188 MT1BP07438 61 aa4.15□□□□□ -1.75
RBFOX1-220ENST00000570188 ROMO1P60602 79 aa4.15□□□□□ -1.75
RBFOX1-220ENST00000570188 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
RBFOX1-220ENST00000570188 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
RBFOX1-220ENST00000570188 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
RBFOX1-220ENST00000570188 MT1XP80297 61 aa4.02□□□□□ -1.77
RBFOX1-220ENST00000570188 USH2AO75445 5202 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms