RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
VCPKMT-205ENST00000569518 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
VCPKMT-205ENST00000569518 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
VCPKMT-205ENST00000569518 H1FX-AS1Q4G0G2 97 aa11.28□□□□□ -0.6
VCPKMT-205ENST00000569518 Q5VV11 94 aa11.25□□□□□ -0.61
VCPKMT-205ENST00000569518 LCA10Q71F78 164 aa11.23□□□□□ -0.61
VCPKMT-205ENST00000569518 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
VCPKMT-205ENST00000569518 S4R3F8 94 aa11.22□□□□□ -0.61
VCPKMT-205ENST00000569518 A0A1B0GU69 56 aa11.14□□□□□ -0.63
VCPKMT-205ENST00000569518 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
VCPKMT-205ENST00000569518 MUC2Q02817 5179 aa11.02□□□□□ -0.64
VCPKMT-205ENST00000569518 SEC61GP60059 68 aa11.01□□□□□ -0.65
VCPKMT-205ENST00000569518 A6NED7 52 aa10.95□□□□□ -0.66
VCPKMT-205ENST00000569518 CSAG1Q6PB30 78 aa10.95□□□□□ -0.66
VCPKMT-205ENST00000569518 BRK1Q8WUW1 75 aa10.93□□□□□ -0.66
VCPKMT-205ENST00000569518 UBR4Q5T4S7 5183 aa10.9□□□□□ -0.66
VCPKMT-205ENST00000569518 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
VCPKMT-205ENST00000569518 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
VCPKMT-205ENST00000569518 FLGP20930 4061 aaPredicted RBP10.84□□□□□ -0.67
VCPKMT-205ENST00000569518 RNF213Q63HN8 5207 aa10.83□□□□□ -0.68
VCPKMT-205ENST00000569518 UQCR11O14957 56 aa10.83□□□□□ -0.68
VCPKMT-205ENST00000569518 A8MU10 97 aa10.82□□□□□ -0.68
VCPKMT-205ENST00000569518 LCE2CQ5TA81 110 aa10.81□□□□□ -0.68
VCPKMT-205ENST00000569518 CDC42SE1Q9NRR8 79 aa10.81□□□□□ -0.68
VCPKMT-205ENST00000569518 A0A1B0GU33 70 aa10.78□□□□□ -0.68
VCPKMT-205ENST00000569518 PRO0628Q9UI54 55 aa10.77□□□□□ -0.68
VCPKMT-205ENST00000569518 H0YAA0 97 aa10.77□□□□□ -0.69
VCPKMT-205ENST00000569518 SPATA8Q6RVD6 105 aa10.75□□□□□ -0.69
VCPKMT-205ENST00000569518 ADM2Q7Z4H4 148 aa10.75□□□□□ -0.69
VCPKMT-205ENST00000569518 P0C880 135 aa10.74□□□□□ -0.69
VCPKMT-205ENST00000569518 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
VCPKMT-205ENST00000569518 KRTAP13-4Q3LI77 160 aa10.58□□□□□ -0.72
VCPKMT-205ENST00000569518 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
VCPKMT-205ENST00000569518 MT1HP80294 61 aa10.55□□□□□ -0.72
VCPKMT-205ENST00000569518 M0QZ58 72 aa10.44□□□□□ -0.74
VCPKMT-205ENST00000569518 LORP23490 312 aaPredicted RBP10.41□□□□□ -0.74
VCPKMT-205ENST00000569518 M0R2T5 61 aa10.38□□□□□ -0.75
VCPKMT-205ENST00000569518 A0A0D9SG42 100 aa10.33□□□□□ -0.76
VCPKMT-205ENST00000569518 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
VCPKMT-205ENST00000569518 R4GN34 69 aa10.33□□□□□ -0.76
VCPKMT-205ENST00000569518 A6NN06 94 aa10.31□□□□□ -0.76
VCPKMT-205ENST00000569518 CRIPTQ9P021 101 aa10.22□□□□□ -0.77
VCPKMT-205ENST00000569518 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
VCPKMT-205ENST00000569518 MT2AP02795 61 aa10.17□□□□□ -0.78
VCPKMT-205ENST00000569518 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
VCPKMT-205ENST00000569518 K7ERS5 55 aa10.17□□□□□ -0.78
VCPKMT-205ENST00000569518 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
VCPKMT-205ENST00000569518 LINC01554Q52M75 96 aa10.15□□□□□ -0.78
VCPKMT-205ENST00000569518 MT1FP04733 61 aa10.12□□□□□ -0.79
VCPKMT-205ENST00000569518 LCE2AQ5TA79 106 aaPredicted RBP10.07□□□□□ -0.8
VCPKMT-205ENST00000569518 SPINT4Q6UDR6 99 aa10.06□□□□□ -0.8
VCPKMT-205ENST00000569518 KRTAP10-10P60014 251 aa10.05□□□□□ -0.8
VCPKMT-205ENST00000569518 SPRR2GQ9BYE4 73 aa10.03□□□□□ -0.8
VCPKMT-205ENST00000569518 KRTAP19-1Q8IUB9 90 aa10□□□□□ -0.81
VCPKMT-205ENST00000569518 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
VCPKMT-205ENST00000569518 ROMO1P60602 79 aa9.82□□□□□ -0.84
VCPKMT-205ENST00000569518 KRTAP9-3Q9BYQ3 159 aa9.82□□□□□ -0.84
VCPKMT-205ENST00000569518 KRTAP19-8Q3LI54 63 aa9.75□□□□□ -0.85
VCPKMT-205ENST00000569518 PRAC1Q96KF2 57 aa9.7□□□□□ -0.86
VCPKMT-205ENST00000569518 CAMK2N1Q7Z7J9 78 aa9.68□□□□□ -0.86
VCPKMT-205ENST00000569518 PLAC4Q8WY50 150 aa9.65□□□□□ -0.86
VCPKMT-205ENST00000569518 C10orf95Q9H7T3 257 aa9.63□□□□□ -0.87
VCPKMT-205ENST00000569518 MT1BP07438 61 aa9.62□□□□□ -0.87
VCPKMT-205ENST00000569518 LCE2BO14633 110 aa9.53□□□□□ -0.88
VCPKMT-205ENST00000569518 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
VCPKMT-205ENST00000569518 MT1XP80297 61 aa9.34□□□□□ -0.91
VCPKMT-205ENST00000569518 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
VCPKMT-205ENST00000569518 H3BS24 57 aa9.26□□□□□ -0.93
VCPKMT-205ENST00000569518 TNP1P09430 55 aa9.24□□□□□ -0.93
VCPKMT-205ENST00000569518 USH2AO75445 5202 aa9.22□□□□□ -0.93
VCPKMT-205ENST00000569518 PRO2289Q9P1D8 64 aa9.14□□□□□ -0.95
VCPKMT-205ENST00000569518 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
VCPKMT-205ENST00000569518 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
VCPKMT-205ENST00000569518 KRTAP23-1A1A580 65 aa9.03□□□□□ -0.96
VCPKMT-205ENST00000569518 KRTAP10-7P60409 375 aaPredicted RBP8.96□□□□□ -0.98
VCPKMT-205ENST00000569518 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
VCPKMT-205ENST00000569518 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.98
VCPKMT-205ENST00000569518 LCE3AQ5TA76 89 aa8.88□□□□□ -0.99
VCPKMT-205ENST00000569518 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
VCPKMT-205ENST00000569518 FSIP2Q5CZC0 6907 aa8.75□□□□□ -1.01
VCPKMT-205ENST00000569518 A0A0A0MQY5 61 aa8.73□□□□□ -1.01
VCPKMT-205ENST00000569518 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
VCPKMT-205ENST00000569518 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
VCPKMT-205ENST00000569518 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
VCPKMT-205ENST00000569518 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
VCPKMT-205ENST00000569518 KRTAP12-3P60328 96 aa8.51□□□□□ -1.05
VCPKMT-205ENST00000569518 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
VCPKMT-205ENST00000569518 KMT2DO14686 5537 aa8.49□□□□□ -1.05
VCPKMT-205ENST00000569518 KRTAP19-5Q3LI72 72 aa8.45□□□□□ -1.06
VCPKMT-205ENST00000569518 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.06
VCPKMT-205ENST00000569518 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
VCPKMT-205ENST00000569518 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
VCPKMT-205ENST00000569518 MT1EP04732 61 aa8.17□□□□□ -1.1
VCPKMT-205ENST00000569518 SPRR5A0A1B0GTR4 108 aa8.14□□□□□ -1.11
VCPKMT-205ENST00000569518 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
VCPKMT-205ENST00000569518 MT1LQ93083 61 aa8.02□□□□□ -1.13
VCPKMT-205ENST00000569518 LCE3CQ5T5A8 94 aa7.97□□□□□ -1.13
VCPKMT-205ENST00000569518 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
VCPKMT-205ENST00000569518 SPRR2FQ96RM1 72 aa7.89□□□□□ -1.15
VCPKMT-205ENST00000569518 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms