RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
CDH13-213ENST00000569454 Q1T7F1 81 aa3.29□□□□□ -1.88
CDH13-213ENST00000569454 LINC00304Q8N9R0 145 aa3.29□□□□□ -1.88
CDH13-213ENST00000569454 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
CDH13-213ENST00000569454 DNAH8Q96JB1 4490 aa3.28□□□□□ -1.88
CDH13-213ENST00000569454 PRR4Q16378 134 aa3.27□□□□□ -1.89
CDH13-213ENST00000569454 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
CDH13-213ENST00000569454 DNAH11Q96DT5 4516 aa3.26□□□□□ -1.89
CDH13-213ENST00000569454 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
CDH13-213ENST00000569454 COA5Q86WW8 74 aa3.26□□□□□ -1.89
CDH13-213ENST00000569454 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
CDH13-213ENST00000569454 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
CDH13-213ENST00000569454 LRP2P98164 4655 aa3.25□□□□□ -1.89
CDH13-213ENST00000569454 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
CDH13-213ENST00000569454 IGKV2-30P06310 120 aa3.24□□□□□ -1.89
CDH13-213ENST00000569454 Q5W150 140 aa3.24□□□□□ -1.89
CDH13-213ENST00000569454 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
CDH13-213ENST00000569454 PKD1P98161 4303 aa3.24□□□□□ -1.89
CDH13-213ENST00000569454 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
CDH13-213ENST00000569454 ACYP2P14621 99 aa3.23□□□□□ -1.89
CDH13-213ENST00000569454 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
CDH13-213ENST00000569454 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
CDH13-213ENST00000569454 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
CDH13-213ENST00000569454 A6NN06 94 aa3.21□□□□□ -1.9
CDH13-213ENST00000569454 SMR3BP02814 79 aaPredicted RBP3.2□□□□□ -1.9
CDH13-213ENST00000569454 HRES1P13985 223 aa3.2□□□□□ -1.9
CDH13-213ENST00000569454 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
CDH13-213ENST00000569454 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
CDH13-213ENST00000569454 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
CDH13-213ENST00000569454 A8MUU9 505 aa3.18□□□□□ -1.9
CDH13-213ENST00000569454 C20orf166-AS1Q96NR2 134 aa3.18□□□□□ -1.9
CDH13-213ENST00000569454 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
CDH13-213ENST00000569454 FAT1Q14517 4588 aa3.17□□□□□ -1.9
CDH13-213ENST00000569454 IGKV2D-30A0A075B6S6 120 aa3.17□□□□□ -1.9
CDH13-213ENST00000569454 Q5VV11 94 aa3.17□□□□□ -1.9
CDH13-213ENST00000569454 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
CDH13-213ENST00000569454 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
CDH13-213ENST00000569454 SPTSSBQ8NFR3 76 aa3.16□□□□□ -1.9
CDH13-213ENST00000569454 APOBP04114 4563 aaKnown RBP3.15□□□□□ -1.91
CDH13-213ENST00000569454 Q5VSD8 79 aa3.14□□□□□ -1.91
CDH13-213ENST00000569454 Q8N1X5 172 aa3.14□□□□□ -1.91
CDH13-213ENST00000569454 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
CDH13-213ENST00000569454 A6NED7 52 aa3.13□□□□□ -1.91
CDH13-213ENST00000569454 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
CDH13-213ENST00000569454 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
CDH13-213ENST00000569454 C9orf92A6NGG3 77 aa3.1□□□□□ -1.91
CDH13-213ENST00000569454 A0A1B0GU69 56 aa3.09□□□□□ -1.91
CDH13-213ENST00000569454 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
CDH13-213ENST00000569454 SPINK7P58062 85 aa3.07□□□□□ -1.92
CDH13-213ENST00000569454 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
CDH13-213ENST00000569454 UQCR11O14957 56 aa3.05□□□□□ -1.92
CDH13-213ENST00000569454 COX6B2Q6YFQ2 88 aa3.05□□□□□ -1.92
CDH13-213ENST00000569454 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
CDH13-213ENST00000569454 K7ERS5 55 aa3.04□□□□□ -1.92
CDH13-213ENST00000569454 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
CDH13-213ENST00000569454 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
CDH13-213ENST00000569454 ROMO1P60602 79 aa3.02□□□□□ -1.93
CDH13-213ENST00000569454 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
CDH13-213ENST00000569454 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
CDH13-213ENST00000569454 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
CDH13-213ENST00000569454 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
CDH13-213ENST00000569454 ADM2Q7Z4H4 148 aa3□□□□□ -1.93
CDH13-213ENST00000569454 KRTAP3-1Q9BYR8 98 aa3□□□□□ -1.93
CDH13-213ENST00000569454 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
CDH13-213ENST00000569454 A8MU10 97 aa2.97□□□□□ -1.93
CDH13-213ENST00000569454 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CDH13-213ENST00000569454 TNXBP22105 4242 aa2.96□□□□□ -1.94
CDH13-213ENST00000569454 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
CDH13-213ENST00000569454 USH2AO75445 5202 aa2.95□□□□□ -1.94
CDH13-213ENST00000569454 A0A1B0GU33 70 aa2.95□□□□□ -1.94
CDH13-213ENST00000569454 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
CDH13-213ENST00000569454 KMT2DO14686 5537 aa2.94□□□□□ -1.94
CDH13-213ENST00000569454 S4R3F8 94 aa2.94□□□□□ -1.94
CDH13-213ENST00000569454 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
CDH13-213ENST00000569454 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CDH13-213ENST00000569454 H0YAA0 97 aa2.89□□□□□ -1.95
CDH13-213ENST00000569454 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
CDH13-213ENST00000569454 CSAG1Q6PB30 78 aa2.87□□□□□ -1.95
CDH13-213ENST00000569454 P0C880 135 aa2.86□□□□□ -1.95
CDH13-213ENST00000569454 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
CDH13-213ENST00000569454 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
CDH13-213ENST00000569454 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
CDH13-213ENST00000569454 M0QZ58 72 aa2.82□□□□□ -1.96
CDH13-213ENST00000569454 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
CDH13-213ENST00000569454 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
CDH13-213ENST00000569454 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
CDH13-213ENST00000569454 A0A0D9SG42 100 aa2.75□□□□□ -1.97
CDH13-213ENST00000569454 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP15-1Q3LI76 137 aa2.74□□□□□ -1.97
CDH13-213ENST00000569454 R4GN34 69 aa2.73□□□□□ -1.97
CDH13-213ENST00000569454 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
CDH13-213ENST00000569454 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
CDH13-213ENST00000569454 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
CDH13-213ENST00000569454 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CDH13-213ENST00000569454 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
CDH13-213ENST00000569454 LPAP08519 4548 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms