RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 IMUPQ9GZP8 106 aa4.64□□□□□ -1.67
CHD9-219ENST00000569225 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
CHD9-219ENST00000569225 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
CHD9-219ENST00000569225 TRAV22A0A0B4J277 110 aa4.62□□□□□ -1.67
CHD9-219ENST00000569225 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
CHD9-219ENST00000569225 ATOX1O00244 68 aa4.6□□□□□ -1.67
CHD9-219ENST00000569225 COX7CP15954 63 aa4.6□□□□□ -1.67
CHD9-219ENST00000569225 MT1HP80294 61 aa4.6□□□□□ -1.67
CHD9-219ENST00000569225 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
CHD9-219ENST00000569225 LOC101927531A0A1B0GV80 90 aa4.58□□□□□ -1.68
CHD9-219ENST00000569225 M0R2T5 61 aa4.58□□□□□ -1.68
CHD9-219ENST00000569225 SERP1Q9Y6X1 66 aa4.58□□□□□ -1.68
CHD9-219ENST00000569225 H0Y9P7 68 aa4.58□□□□□ -1.68
CHD9-219ENST00000569225 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
CHD9-219ENST00000569225 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
CHD9-219ENST00000569225 MP68P56378 58 aa4.56□□□□□ -1.68
CHD9-219ENST00000569225 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
CHD9-219ENST00000569225 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
CHD9-219ENST00000569225 C1orf64Q8NEQ6 169 aa4.54□□□□□ -1.68
CHD9-219ENST00000569225 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
CHD9-219ENST00000569225 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
CHD9-219ENST00000569225 H3BPC8 53 aa4.52□□□□□ -1.69
CHD9-219ENST00000569225 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
CHD9-219ENST00000569225 A8MUN3 132 aa4.48□□□□□ -1.69
CHD9-219ENST00000569225 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
CHD9-219ENST00000569225 LCA10Q71F78 164 aa4.48□□□□□ -1.69
CHD9-219ENST00000569225 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
CHD9-219ENST00000569225 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
CHD9-219ENST00000569225 PSPHP1O15172 72 aa4.43□□□□□ -1.7
CHD9-219ENST00000569225 KLKP1Q107X0 134 aa4.43□□□□□ -1.7
CHD9-219ENST00000569225 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
CHD9-219ENST00000569225 S4R3F8 94 aa4.42□□□□□ -1.7
CHD9-219ENST00000569225 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
CHD9-219ENST00000569225 C20orf197Q8N268 126 aa4.37□□□□□ -1.71
CHD9-219ENST00000569225 SNURFQ9Y675 71 aa4.36□□□□□ -1.71
CHD9-219ENST00000569225 MT2AP02795 61 aa4.35□□□□□ -1.71
CHD9-219ENST00000569225 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
CHD9-219ENST00000569225 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
CHD9-219ENST00000569225 NDUFC1O43677 76 aa4.34□□□□□ -1.71
CHD9-219ENST00000569225 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
CHD9-219ENST00000569225 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
CHD9-219ENST00000569225 KRTAP10-10P60014 251 aa4.32□□□□□ -1.72
CHD9-219ENST00000569225 MT1FP04733 61 aa4.3□□□□□ -1.72
CHD9-219ENST00000569225 ACYP2P14621 99 aa4.3□□□□□ -1.72
CHD9-219ENST00000569225 SPANXA2-OT1Q8N9U9 137 aa4.3□□□□□ -1.72
CHD9-219ENST00000569225 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
CHD9-219ENST00000569225 Q1T7F1 81 aa4.28□□□□□ -1.72
CHD9-219ENST00000569225 H7BZZ5 65 aa4.27□□□□□ -1.73
CHD9-219ENST00000569225 A6NN06 94 aa4.26□□□□□ -1.73
CHD9-219ENST00000569225 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
CHD9-219ENST00000569225 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
CHD9-219ENST00000569225 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
CHD9-219ENST00000569225 H0YAA0 97 aa4.22□□□□□ -1.73
CHD9-219ENST00000569225 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
CHD9-219ENST00000569225 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
CHD9-219ENST00000569225 COA5Q86WW8 74 aa4.15□□□□□ -1.75
CHD9-219ENST00000569225 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
CHD9-219ENST00000569225 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
CHD9-219ENST00000569225 USH2AO75445 5202 aa4.13□□□□□ -1.75
CHD9-219ENST00000569225 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CHD9-219ENST00000569225 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
CHD9-219ENST00000569225 P0C880 135 aa4.08□□□□□ -1.76
CHD9-219ENST00000569225 R4GN34 69 aa4.07□□□□□ -1.76
CHD9-219ENST00000569225 Q5VV11 94 aa4.07□□□□□ -1.76
CHD9-219ENST00000569225 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
CHD9-219ENST00000569225 M0QZ58 72 aa4.04□□□□□ -1.76
CHD9-219ENST00000569225 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
CHD9-219ENST00000569225 K7ERS5 55 aa4.01□□□□□ -1.77
CHD9-219ENST00000569225 ROMO1P60602 79 aa4.01□□□□□ -1.77
CHD9-219ENST00000569225 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
CHD9-219ENST00000569225 MT1BP07438 61 aa4□□□□□ -1.77
CHD9-219ENST00000569225 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
CHD9-219ENST00000569225 A6NED7 52 aa3.98□□□□□ -1.77
CHD9-219ENST00000569225 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
CHD9-219ENST00000569225 A8MU10 97 aa3.98□□□□□ -1.77
CHD9-219ENST00000569225 A0A1B0GU69 56 aa3.96□□□□□ -1.78
CHD9-219ENST00000569225 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
CHD9-219ENST00000569225 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
CHD9-219ENST00000569225 PRR15LQ9BU68 103 aa3.93□□□□□ -1.78
CHD9-219ENST00000569225 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
CHD9-219ENST00000569225 A0A1B0GU33 70 aa3.92□□□□□ -1.78
CHD9-219ENST00000569225 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
CHD9-219ENST00000569225 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.78
CHD9-219ENST00000569225 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
CHD9-219ENST00000569225 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
CHD9-219ENST00000569225 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
CHD9-219ENST00000569225 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
CHD9-219ENST00000569225 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
CHD9-219ENST00000569225 A0A0D9SG42 100 aa3.83□□□□□ -1.8
CHD9-219ENST00000569225 MT1XP80297 61 aa3.81□□□□□ -1.8
CHD9-219ENST00000569225 UQCR11O14957 56 aa3.78□□□□□ -1.8
CHD9-219ENST00000569225 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
CHD9-219ENST00000569225 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
CHD9-219ENST00000569225 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
CHD9-219ENST00000569225 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
CHD9-219ENST00000569225 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
CHD9-219ENST00000569225 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
CHD9-219ENST00000569225 KRTAP12-2P59991 146 aa3.71□□□□□ -1.82
CHD9-219ENST00000569225 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
CHD9-219ENST00000569225 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms