RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 LINC01558Q9Y6Z2 57 aa10.64□□□□□ -0.71
SPNS1-212ENST00000568900 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
SPNS1-212ENST00000568900 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
SPNS1-212ENST00000568900 Q5VV11 94 aa10.55□□□□□ -0.72
SPNS1-212ENST00000568900 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
SPNS1-212ENST00000568900 RBM12B-AS1Q9P1G2 102 aa10.54□□□□□ -0.72
SPNS1-212ENST00000568900 MUC17Q685J3 4493 aa10.53□□□□□ -0.72
SPNS1-212ENST00000568900 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
SPNS1-212ENST00000568900 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
SPNS1-212ENST00000568900 A0A1B0GU69 56 aa10.46□□□□□ -0.73
SPNS1-212ENST00000568900 LCA10Q71F78 164 aa10.46□□□□□ -0.73
SPNS1-212ENST00000568900 S4R3F8 94 aa10.46□□□□□ -0.74
SPNS1-212ENST00000568900 A8MU10 97 aa10.42□□□□□ -0.74
SPNS1-212ENST00000568900 KTN1-AS1Q86SY8 53 aa10.42□□□□□ -0.74
SPNS1-212ENST00000568900 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
SPNS1-212ENST00000568900 A6NED7 52 aa10.34□□□□□ -0.75
SPNS1-212ENST00000568900 MUC2Q02817 5179 aa10.29□□□□□ -0.76
SPNS1-212ENST00000568900 H3BS24 57 aa10.23□□□□□ -0.77
SPNS1-212ENST00000568900 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.77
SPNS1-212ENST00000568900 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
SPNS1-212ENST00000568900 A6NN06 94 aa10.18□□□□□ -0.78
SPNS1-212ENST00000568900 UQCR11O14957 56 aa10.16□□□□□ -0.78
SPNS1-212ENST00000568900 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
SPNS1-212ENST00000568900 A0A1B0GU33 70 aa10.09□□□□□ -0.79
SPNS1-212ENST00000568900 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
SPNS1-212ENST00000568900 KRTAP10-6P60371 365 aaPredicted RBP10.08□□□□□ -0.8
SPNS1-212ENST00000568900 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
SPNS1-212ENST00000568900 MIR22HGQ0VDD5 57 aa10.07□□□□□ -0.8
SPNS1-212ENST00000568900 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
SPNS1-212ENST00000568900 RNF213Q63HN8 5207 aa10.04□□□□□ -0.8
SPNS1-212ENST00000568900 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
SPNS1-212ENST00000568900 FLGP20930 4061 aaPredicted RBP10.03□□□□□ -0.8
SPNS1-212ENST00000568900 P0C880 135 aa10.02□□□□□ -0.81
SPNS1-212ENST00000568900 H0YAA0 97 aa9.98□□□□□ -0.81
SPNS1-212ENST00000568900 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
SPNS1-212ENST00000568900 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
SPNS1-212ENST00000568900 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
SPNS1-212ENST00000568900 PRAC1Q96KF2 57 aa9.84□□□□□ -0.83
SPNS1-212ENST00000568900 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
SPNS1-212ENST00000568900 A0A0D9SG42 100 aa9.73□□□□□ -0.85
SPNS1-212ENST00000568900 MT1HP80294 61 aa9.72□□□□□ -0.85
SPNS1-212ENST00000568900 M0QZ58 72 aa9.7□□□□□ -0.86
SPNS1-212ENST00000568900 M0R2T5 61 aa9.69□□□□□ -0.86
SPNS1-212ENST00000568900 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
SPNS1-212ENST00000568900 R4GN34 69 aa9.66□□□□□ -0.86
SPNS1-212ENST00000568900 K7ERS5 55 aa9.57□□□□□ -0.88
SPNS1-212ENST00000568900 KRTAP12-2P59991 146 aa9.48□□□□□ -0.89
SPNS1-212ENST00000568900 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
SPNS1-212ENST00000568900 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
SPNS1-212ENST00000568900 CRIPTQ9P021 101 aa9.43□□□□□ -0.9
SPNS1-212ENST00000568900 MT2AP02795 61 aa9.38□□□□□ -0.91
SPNS1-212ENST00000568900 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
SPNS1-212ENST00000568900 MT1FP04733 61 aa9.34□□□□□ -0.91
SPNS1-212ENST00000568900 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
SPNS1-212ENST00000568900 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
SPNS1-212ENST00000568900 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
SPNS1-212ENST00000568900 ROMO1P60602 79 aa9.21□□□□□ -0.94
SPNS1-212ENST00000568900 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
SPNS1-212ENST00000568900 CAMK2N1Q7Z7J9 78 aa9.08□□□□□ -0.96
SPNS1-212ENST00000568900 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.96
SPNS1-212ENST00000568900 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
SPNS1-212ENST00000568900 PLAC4Q8WY50 150 aa9□□□□□ -0.97
SPNS1-212ENST00000568900 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
SPNS1-212ENST00000568900 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.97
SPNS1-212ENST00000568900 KRTAP19-8Q3LI54 63 aa8.96□□□□□ -0.98
SPNS1-212ENST00000568900 MT1BP07438 61 aa8.86□□□□□ -0.99
SPNS1-212ENST00000568900 LCE2BO14633 110 aa8.77□□□□□ -1.01
SPNS1-212ENST00000568900 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
SPNS1-212ENST00000568900 TNP1P09430 55 aa8.63□□□□□ -1.03
SPNS1-212ENST00000568900 MT1XP80297 61 aa8.62□□□□□ -1.03
SPNS1-212ENST00000568900 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
SPNS1-212ENST00000568900 KRTAP10-5P60370 271 aa8.61□□□□□ -1.03
SPNS1-212ENST00000568900 USH2AO75445 5202 aa8.54□□□□□ -1.04
SPNS1-212ENST00000568900 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
SPNS1-212ENST00000568900 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.05
SPNS1-212ENST00000568900 PP632Q6XCG6 107 aa8.42□□□□□ -1.06
SPNS1-212ENST00000568900 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
SPNS1-212ENST00000568900 KRTAP10-7P60409 375 aaPredicted RBP8.31□□□□□ -1.08
SPNS1-212ENST00000568900 SSPOA2VEC9 5147 aa8.27□□□□□ -1.09
SPNS1-212ENST00000568900 LCE3AQ5TA76 89 aa8.27□□□□□ -1.09
SPNS1-212ENST00000568900 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
SPNS1-212ENST00000568900 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
SPNS1-212ENST00000568900 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
SPNS1-212ENST00000568900 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
SPNS1-212ENST00000568900 KRTAP8-1Q8IUC2 63 aa8.05□□□□□ -1.12
SPNS1-212ENST00000568900 KMT2DO14686 5537 aa8□□□□□ -1.13
SPNS1-212ENST00000568900 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
SPNS1-212ENST00000568900 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
SPNS1-212ENST00000568900 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
SPNS1-212ENST00000568900 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.15
SPNS1-212ENST00000568900 FCGBPQ9Y6R7 5405 aaPredicted RBP7.86□□□□□ -1.15
SPNS1-212ENST00000568900 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
SPNS1-212ENST00000568900 KRTAP19-7Q3SYF9 63 aa7.68□□□□□ -1.18
SPNS1-212ENST00000568900 CRCT1Q9UGL9 99 aa7.63□□□□□ -1.19
SPNS1-212ENST00000568900 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
SPNS1-212ENST00000568900 MT1EP04732 61 aa7.53□□□□□ -1.2
SPNS1-212ENST00000568900 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
SPNS1-212ENST00000568900 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
SPNS1-212ENST00000568900 MT1LQ93083 61 aa7.4□□□□□ -1.22
SPNS1-212ENST00000568900 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms