RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 Q5VSD8 79 aa5.16□□□□□ -1.58
TCF4-240ENST00000568673 RYR1P21817 5038 aa5.16□□□□□ -1.58
TCF4-240ENST00000568673 A6NN06 94 aa5.14□□□□□ -1.59
TCF4-240ENST00000568673 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
TCF4-240ENST00000568673 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
TCF4-240ENST00000568673 UQCR11O14957 56 aa5.13□□□□□ -1.59
TCF4-240ENST00000568673 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
TCF4-240ENST00000568673 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
TCF4-240ENST00000568673 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
TCF4-240ENST00000568673 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
TCF4-240ENST00000568673 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
TCF4-240ENST00000568673 RBM12B-AS1Q9P1G2 102 aa5.09□□□□□ -1.59
TCF4-240ENST00000568673 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
TCF4-240ENST00000568673 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
TCF4-240ENST00000568673 KIAA1109Q2LD37 5005 aa5.08□□□□□ -1.6
TCF4-240ENST00000568673 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
TCF4-240ENST00000568673 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
TCF4-240ENST00000568673 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
TCF4-240ENST00000568673 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
TCF4-240ENST00000568673 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
TCF4-240ENST00000568673 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
TCF4-240ENST00000568673 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
TCF4-240ENST00000568673 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
TCF4-240ENST00000568673 A0A1B0GU33 70 aa4.97□□□□□ -1.61
TCF4-240ENST00000568673 H0YAA0 97 aa4.96□□□□□ -1.62
TCF4-240ENST00000568673 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
TCF4-240ENST00000568673 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
TCF4-240ENST00000568673 LRP2P98164 4655 aa4.92□□□□□ -1.62
TCF4-240ENST00000568673 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
TCF4-240ENST00000568673 LPAP08519 4548 aa4.91□□□□□ -1.62
TCF4-240ENST00000568673 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
TCF4-240ENST00000568673 S4R3F8 94 aa4.89□□□□□ -1.63
TCF4-240ENST00000568673 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
TCF4-240ENST00000568673 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
TCF4-240ENST00000568673 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
TCF4-240ENST00000568673 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.64
TCF4-240ENST00000568673 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.64
TCF4-240ENST00000568673 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.64
TCF4-240ENST00000568673 K7ERS5 55 aa4.79□□□□□ -1.64
TCF4-240ENST00000568673 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
TCF4-240ENST00000568673 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
TCF4-240ENST00000568673 P0C880 135 aa4.77□□□□□ -1.65
TCF4-240ENST00000568673 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
TCF4-240ENST00000568673 HERC2O95714 4834 aa4.74□□□□□ -1.65
TCF4-240ENST00000568673 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
TCF4-240ENST00000568673 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
TCF4-240ENST00000568673 A0A0D9SG42 100 aa4.72□□□□□ -1.65
TCF4-240ENST00000568673 LINC01554Q52M75 96 aa4.7□□□□□ -1.66
TCF4-240ENST00000568673 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
TCF4-240ENST00000568673 ROMO1P60602 79 aa4.66□□□□□ -1.66
TCF4-240ENST00000568673 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
TCF4-240ENST00000568673 M0QZ58 72 aa4.65□□□□□ -1.67
TCF4-240ENST00000568673 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
TCF4-240ENST00000568673 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
TCF4-240ENST00000568673 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
TCF4-240ENST00000568673 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
TCF4-240ENST00000568673 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
TCF4-240ENST00000568673 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
TCF4-240ENST00000568673 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
TCF4-240ENST00000568673 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
TCF4-240ENST00000568673 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
TCF4-240ENST00000568673 R4GN34 69 aa4.54□□□□□ -1.68
TCF4-240ENST00000568673 MUC2Q02817 5179 aa4.54□□□□□ -1.68
TCF4-240ENST00000568673 HERC1Q15751 4861 aa4.51□□□□□ -1.69
TCF4-240ENST00000568673 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
TCF4-240ENST00000568673 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
TCF4-240ENST00000568673 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
TCF4-240ENST00000568673 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
TCF4-240ENST00000568673 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
TCF4-240ENST00000568673 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
TCF4-240ENST00000568673 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
TCF4-240ENST00000568673 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
TCF4-240ENST00000568673 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
TCF4-240ENST00000568673 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
TCF4-240ENST00000568673 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
TCF4-240ENST00000568673 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
TCF4-240ENST00000568673 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
TCF4-240ENST00000568673 MT1HP80294 61 aa4.2□□□□□ -1.74
TCF4-240ENST00000568673 M0R2T5 61 aa4.2□□□□□ -1.74
TCF4-240ENST00000568673 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
TCF4-240ENST00000568673 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TCF4-240ENST00000568673 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
TCF4-240ENST00000568673 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
TCF4-240ENST00000568673 TNP1P09430 55 aa4.13□□□□□ -1.75
TCF4-240ENST00000568673 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
TCF4-240ENST00000568673 MT2AP02795 61 aa4.11□□□□□ -1.75
TCF4-240ENST00000568673 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
TCF4-240ENST00000568673 MT1FP04733 61 aa4.1□□□□□ -1.75
TCF4-240ENST00000568673 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
TCF4-240ENST00000568673 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
TCF4-240ENST00000568673 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
TCF4-240ENST00000568673 MT1BP07438 61 aa3.95□□□□□ -1.78
TCF4-240ENST00000568673 KRTAP9-3Q9BYQ3 159 aa3.94□□□□□ -1.78
TCF4-240ENST00000568673 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
TCF4-240ENST00000568673 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
TCF4-240ENST00000568673 MT1XP80297 61 aa3.9□□□□□ -1.78
TCF4-240ENST00000568673 LCE3AQ5TA76 89 aa3.9□□□□□ -1.78
TCF4-240ENST00000568673 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TCF4-240ENST00000568673 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
TCF4-240ENST00000568673 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms