RNA–Protein interactions for RNA: ENST00000568328.5

VWA3A-208, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-208ENST00000568328 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
VWA3A-208ENST00000568328 LRP2P98164 4655 aa5.85□□□□□ -1.47
VWA3A-208ENST00000568328 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
VWA3A-208ENST00000568328 LINC00304Q8N9R0 145 aa5.84□□□□□ -1.47
VWA3A-208ENST00000568328 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
VWA3A-208ENST00000568328 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
VWA3A-208ENST00000568328 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
VWA3A-208ENST00000568328 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
VWA3A-208ENST00000568328 SSBP3-AS1Q7Z2R9 100 aa5.76□□□□□ -1.49
VWA3A-208ENST00000568328 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
VWA3A-208ENST00000568328 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
VWA3A-208ENST00000568328 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
VWA3A-208ENST00000568328 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.49
VWA3A-208ENST00000568328 SPINK1P00995 79 aa5.71□□□□□ -1.5
VWA3A-208ENST00000568328 LPAP08519 4548 aa5.7□□□□□ -1.5
VWA3A-208ENST00000568328 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
VWA3A-208ENST00000568328 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
VWA3A-208ENST00000568328 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
VWA3A-208ENST00000568328 A8MUU9 505 aa5.66□□□□□ -1.5
VWA3A-208ENST00000568328 KRTAP16-1A8MUX0 517 aa5.66□□□□□ -1.5
VWA3A-208ENST00000568328 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
VWA3A-208ENST00000568328 ROMO1P60602 79 aa5.63□□□□□ -1.51
VWA3A-208ENST00000568328 H0YAA0 97 aa5.57□□□□□ -1.52
VWA3A-208ENST00000568328 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
VWA3A-208ENST00000568328 XP32Q5T750 250 aa5.56□□□□□ -1.52
VWA3A-208ENST00000568328 K7ERS5 55 aa5.56□□□□□ -1.52
VWA3A-208ENST00000568328 A0A1B0GU33 70 aa5.54□□□□□ -1.52
VWA3A-208ENST00000568328 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
VWA3A-208ENST00000568328 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
VWA3A-208ENST00000568328 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
VWA3A-208ENST00000568328 KRTAP4-1Q9BYQ7 146 aa5.43□□□□□ -1.54
VWA3A-208ENST00000568328 MUC2Q02817 5179 aa5.4□□□□□ -1.55
VWA3A-208ENST00000568328 P0C880 135 aa5.39□□□□□ -1.55
VWA3A-208ENST00000568328 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
VWA3A-208ENST00000568328 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
VWA3A-208ENST00000568328 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
VWA3A-208ENST00000568328 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
VWA3A-208ENST00000568328 COX6B2Q6YFQ2 88 aa5.35□□□□□ -1.55
VWA3A-208ENST00000568328 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
VWA3A-208ENST00000568328 MT1HP80294 61 aa5.34□□□□□ -1.55
VWA3A-208ENST00000568328 A0A0A0MQY5 61 aa5.34□□□□□ -1.56
VWA3A-208ENST00000568328 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
VWA3A-208ENST00000568328 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
VWA3A-208ENST00000568328 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
VWA3A-208ENST00000568328 M0R2T5 61 aa5.29□□□□□ -1.56
VWA3A-208ENST00000568328 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
VWA3A-208ENST00000568328 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
VWA3A-208ENST00000568328 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
VWA3A-208ENST00000568328 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
VWA3A-208ENST00000568328 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
VWA3A-208ENST00000568328 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
VWA3A-208ENST00000568328 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
VWA3A-208ENST00000568328 S4R3F8 94 aa5.12□□□□□ -1.59
VWA3A-208ENST00000568328 A0A0D9SG42 100 aa5.11□□□□□ -1.59
VWA3A-208ENST00000568328 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
VWA3A-208ENST00000568328 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
VWA3A-208ENST00000568328 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
VWA3A-208ENST00000568328 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
VWA3A-208ENST00000568328 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
VWA3A-208ENST00000568328 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
VWA3A-208ENST00000568328 M0QZ58 72 aa5□□□□□ -1.61
VWA3A-208ENST00000568328 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
VWA3A-208ENST00000568328 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
VWA3A-208ENST00000568328 MT2AP02795 61 aa4.95□□□□□ -1.62
VWA3A-208ENST00000568328 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
VWA3A-208ENST00000568328 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
VWA3A-208ENST00000568328 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
VWA3A-208ENST00000568328 MT1FP04733 61 aa4.88□□□□□ -1.63
VWA3A-208ENST00000568328 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
VWA3A-208ENST00000568328 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
VWA3A-208ENST00000568328 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
VWA3A-208ENST00000568328 LCE2BO14633 110 aa4.84□□□□□ -1.64
VWA3A-208ENST00000568328 USH2AO75445 5202 aa4.81□□□□□ -1.64
VWA3A-208ENST00000568328 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
VWA3A-208ENST00000568328 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
VWA3A-208ENST00000568328 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
VWA3A-208ENST00000568328 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
VWA3A-208ENST00000568328 R4GN34 69 aa4.7□□□□□ -1.66
VWA3A-208ENST00000568328 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
VWA3A-208ENST00000568328 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
VWA3A-208ENST00000568328 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
VWA3A-208ENST00000568328 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
VWA3A-208ENST00000568328 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
VWA3A-208ENST00000568328 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
VWA3A-208ENST00000568328 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
VWA3A-208ENST00000568328 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
VWA3A-208ENST00000568328 MT1BP07438 61 aa4.45□□□□□ -1.7
VWA3A-208ENST00000568328 TNP1P09430 55 aa4.44□□□□□ -1.7
VWA3A-208ENST00000568328 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
VWA3A-208ENST00000568328 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
VWA3A-208ENST00000568328 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.7
VWA3A-208ENST00000568328 NEBP20929 6669 aa4.38□□□□□ -1.71
VWA3A-208ENST00000568328 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
VWA3A-208ENST00000568328 INE1O15225 51 aa4.34□□□□□ -1.71
VWA3A-208ENST00000568328 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
VWA3A-208ENST00000568328 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
VWA3A-208ENST00000568328 SPRR2EP22531 72 aa4.18□□□□□ -1.74
VWA3A-208ENST00000568328 SPRR2BP35325 72 aa4.18□□□□□ -1.74
VWA3A-208ENST00000568328 SPRR2AP35326 72 aa4.18□□□□□ -1.74
VWA3A-208ENST00000568328 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms