RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 FAM236BA0A1B0GV22 79 aa4.01□□□□□ -1.77
SMG1-214ENST00000568038 UQCRQO14949 82 aa4□□□□□ -1.77
SMG1-214ENST00000568038 SPINK7P58062 85 aa3.99□□□□□ -1.77
SMG1-214ENST00000568038 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
SMG1-214ENST00000568038 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
SMG1-214ENST00000568038 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
SMG1-214ENST00000568038 H0Y9P7 68 aa3.97□□□□□ -1.77
SMG1-214ENST00000568038 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
SMG1-214ENST00000568038 MUC17Q685J3 4493 aa3.96□□□□□ -1.77
SMG1-214ENST00000568038 C7orf65Q6ZTY9 151 aa3.96□□□□□ -1.78
SMG1-214ENST00000568038 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
SMG1-214ENST00000568038 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SMG1-214ENST00000568038 ATOX1O00244 68 aa3.94□□□□□ -1.78
SMG1-214ENST00000568038 HRES1P13985 223 aa3.94□□□□□ -1.78
SMG1-214ENST00000568038 MP68P56378 58 aa3.94□□□□□ -1.78
SMG1-214ENST00000568038 C5orf47Q569G3 176 aa3.94□□□□□ -1.78
SMG1-214ENST00000568038 SMIM20Q8N5G0 67 aa3.94□□□□□ -1.78
SMG1-214ENST00000568038 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
SMG1-214ENST00000568038 C1orf64Q8NEQ6 169 aa3.93□□□□□ -1.78
SMG1-214ENST00000568038 LINC00208Q96KT6 92 aa3.93□□□□□ -1.78
SMG1-214ENST00000568038 LOC101927531A0A1B0GV80 90 aa3.92□□□□□ -1.78
SMG1-214ENST00000568038 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
SMG1-214ENST00000568038 CYP4F30PQ9H0H9 118 aa3.92□□□□□ -1.78
SMG1-214ENST00000568038 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
SMG1-214ENST00000568038 A0A0U1RQV1 116 aa3.91□□□□□ -1.78
SMG1-214ENST00000568038 FAM236DA0A1B0GTK5 79 aa3.91□□□□□ -1.78
SMG1-214ENST00000568038 FAM236CP0DP71 79 aa3.91□□□□□ -1.78
SMG1-214ENST00000568038 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
SMG1-214ENST00000568038 SERP2Q8N6R1 65 aa3.9□□□□□ -1.79
SMG1-214ENST00000568038 H3BPC8 53 aa3.89□□□□□ -1.79
SMG1-214ENST00000568038 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
SMG1-214ENST00000568038 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
SMG1-214ENST00000568038 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
SMG1-214ENST00000568038 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
SMG1-214ENST00000568038 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
SMG1-214ENST00000568038 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
SMG1-214ENST00000568038 SNURFQ9Y675 71 aa3.86□□□□□ -1.79
SMG1-214ENST00000568038 MUC2Q02817 5179 aa3.85□□□□□ -1.79
SMG1-214ENST00000568038 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
SMG1-214ENST00000568038 COX7CP15954 63 aa3.84□□□□□ -1.79
SMG1-214ENST00000568038 MT1HP80294 61 aa3.82□□□□□ -1.8
SMG1-214ENST00000568038 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
SMG1-214ENST00000568038 M0R2T5 61 aa3.8□□□□□ -1.8
SMG1-214ENST00000568038 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
SMG1-214ENST00000568038 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
SMG1-214ENST00000568038 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
SMG1-214ENST00000568038 A8MUN3 132 aa3.75□□□□□ -1.81
SMG1-214ENST00000568038 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
SMG1-214ENST00000568038 S4R3F8 94 aa3.75□□□□□ -1.81
SMG1-214ENST00000568038 H7BZZ5 65 aa3.73□□□□□ -1.81
SMG1-214ENST00000568038 NDUFC1O43677 76 aa3.73□□□□□ -1.81
SMG1-214ENST00000568038 LCA10Q71F78 164 aa3.73□□□□□ -1.81
SMG1-214ENST00000568038 SPANXA2-OT1Q8N9U9 137 aa3.73□□□□□ -1.81
SMG1-214ENST00000568038 ACYP2P14621 99 aa3.72□□□□□ -1.81
SMG1-214ENST00000568038 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
SMG1-214ENST00000568038 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SMG1-214ENST00000568038 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
SMG1-214ENST00000568038 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
SMG1-214ENST00000568038 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
SMG1-214ENST00000568038 COA5Q86WW8 74 aa3.64□□□□□ -1.83
SMG1-214ENST00000568038 MT2AP02795 61 aa3.63□□□□□ -1.83
SMG1-214ENST00000568038 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
SMG1-214ENST00000568038 TMEM258P61165 79 aa3.62□□□□□ -1.83
SMG1-214ENST00000568038 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
SMG1-214ENST00000568038 MT1FP04733 61 aa3.61□□□□□ -1.83
SMG1-214ENST00000568038 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
SMG1-214ENST00000568038 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
SMG1-214ENST00000568038 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
SMG1-214ENST00000568038 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
SMG1-214ENST00000568038 H0YAA0 97 aa3.56□□□□□ -1.84
SMG1-214ENST00000568038 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
SMG1-214ENST00000568038 P0C880 135 aa3.52□□□□□ -1.85
SMG1-214ENST00000568038 A8MU10 97 aa3.51□□□□□ -1.85
SMG1-214ENST00000568038 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
SMG1-214ENST00000568038 SEC61GP60059 68 aa3.48□□□□□ -1.85
SMG1-214ENST00000568038 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
SMG1-214ENST00000568038 A0A1B0GU69 56 aa3.45□□□□□ -1.86
SMG1-214ENST00000568038 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
SMG1-214ENST00000568038 R4GN34 69 aa3.45□□□□□ -1.86
SMG1-214ENST00000568038 M0QZ58 72 aa3.44□□□□□ -1.86
SMG1-214ENST00000568038 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
SMG1-214ENST00000568038 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
SMG1-214ENST00000568038 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
SMG1-214ENST00000568038 PRR15LQ9BU68 103 aa3.4□□□□□ -1.87
SMG1-214ENST00000568038 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
SMG1-214ENST00000568038 A0A1B0GU33 70 aa3.39□□□□□ -1.87
SMG1-214ENST00000568038 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
SMG1-214ENST00000568038 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
SMG1-214ENST00000568038 Q5VV11 94 aa3.39□□□□□ -1.87
SMG1-214ENST00000568038 MT1BP07438 61 aa3.37□□□□□ -1.87
SMG1-214ENST00000568038 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
SMG1-214ENST00000568038 V9GYY9 64 aa3.37□□□□□ -1.87
SMG1-214ENST00000568038 Q1T7F1 81 aa3.36□□□□□ -1.87
SMG1-214ENST00000568038 PSPHP1O15172 72 aa3.35□□□□□ -1.87
SMG1-214ENST00000568038 A0A0D9SG42 100 aa3.34□□□□□ -1.87
SMG1-214ENST00000568038 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.87
SMG1-214ENST00000568038 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
SMG1-214ENST00000568038 UQCR11O14957 56 aa3.3□□□□□ -1.88
SMG1-214ENST00000568038 A6NN06 94 aa3.28□□□□□ -1.88
SMG1-214ENST00000568038 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms