RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 LCA10Q71F78 164 aa5.7□□□□□ -1.5
TCF4-236ENST00000567880 A8MU10 97 aa5.69□□□□□ -1.5
TCF4-236ENST00000567880 COA5Q86WW8 74 aa5.69□□□□□ -1.5
TCF4-236ENST00000567880 SPTSSBQ8NFR3 76 aa5.68□□□□□ -1.5
TCF4-236ENST00000567880 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
TCF4-236ENST00000567880 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
TCF4-236ENST00000567880 C7orf65Q6ZTY9 151 aa5.67□□□□□ -1.5
TCF4-236ENST00000567880 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
TCF4-236ENST00000567880 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
TCF4-236ENST00000567880 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
TCF4-236ENST00000567880 HERC1Q15751 4861 aa5.65□□□□□ -1.51
TCF4-236ENST00000567880 LPAP08519 4548 aa5.64□□□□□ -1.51
TCF4-236ENST00000567880 A8MUU9 505 aa5.64□□□□□ -1.51
TCF4-236ENST00000567880 Q5W150 140 aa5.62□□□□□ -1.51
TCF4-236ENST00000567880 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
TCF4-236ENST00000567880 RPL37P61927 97 aaKnown RBP5.6□□□□□ -1.51
TCF4-236ENST00000567880 LRP2P98164 4655 aa5.57□□□□□ -1.52
TCF4-236ENST00000567880 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
TCF4-236ENST00000567880 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
TCF4-236ENST00000567880 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
TCF4-236ENST00000567880 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
TCF4-236ENST00000567880 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
TCF4-236ENST00000567880 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
TCF4-236ENST00000567880 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
TCF4-236ENST00000567880 HRES1P13985 223 aa5.53□□□□□ -1.52
TCF4-236ENST00000567880 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
TCF4-236ENST00000567880 SPINK7P58062 85 aa5.52□□□□□ -1.53
TCF4-236ENST00000567880 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
TCF4-236ENST00000567880 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
TCF4-236ENST00000567880 ACYP2P14621 99 aa5.44□□□□□ -1.54
TCF4-236ENST00000567880 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
TCF4-236ENST00000567880 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
TCF4-236ENST00000567880 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
TCF4-236ENST00000567880 SPATA8Q6RVD6 105 aa5.4□□□□□ -1.54
TCF4-236ENST00000567880 DMAC1Q96GE9 116 aa5.39□□□□□ -1.55
TCF4-236ENST00000567880 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
TCF4-236ENST00000567880 A0A1B0GU69 56 aa5.37□□□□□ -1.55
TCF4-236ENST00000567880 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
TCF4-236ENST00000567880 K7ERS5 55 aa5.36□□□□□ -1.55
TCF4-236ENST00000567880 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
TCF4-236ENST00000567880 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
TCF4-236ENST00000567880 UQCR11O14957 56 aa5.35□□□□□ -1.55
TCF4-236ENST00000567880 MUC2Q02817 5179 aa5.33□□□□□ -1.56
TCF4-236ENST00000567880 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
TCF4-236ENST00000567880 COX6B2Q6YFQ2 88 aa5.31□□□□□ -1.56
TCF4-236ENST00000567880 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
TCF4-236ENST00000567880 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
TCF4-236ENST00000567880 CSAG1Q6PB30 78 aa5.22□□□□□ -1.57
TCF4-236ENST00000567880 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.57
TCF4-236ENST00000567880 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
TCF4-236ENST00000567880 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
TCF4-236ENST00000567880 S4R3F8 94 aa5.17□□□□□ -1.58
TCF4-236ENST00000567880 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
TCF4-236ENST00000567880 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
TCF4-236ENST00000567880 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
TCF4-236ENST00000567880 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
TCF4-236ENST00000567880 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
TCF4-236ENST00000567880 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
TCF4-236ENST00000567880 ROMO1P60602 79 aa5.07□□□□□ -1.6
TCF4-236ENST00000567880 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
TCF4-236ENST00000567880 H0YAA0 97 aa5.03□□□□□ -1.6
TCF4-236ENST00000567880 MT1HP80294 61 aa5.03□□□□□ -1.6
TCF4-236ENST00000567880 M0R2T5 61 aa5.03□□□□□ -1.6
TCF4-236ENST00000567880 A0A1B0GU33 70 aa5□□□□□ -1.61
TCF4-236ENST00000567880 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
TCF4-236ENST00000567880 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
TCF4-236ENST00000567880 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
TCF4-236ENST00000567880 P0C880 135 aa4.91□□□□□ -1.62
TCF4-236ENST00000567880 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
TCF4-236ENST00000567880 MT2AP02795 61 aa4.82□□□□□ -1.64
TCF4-236ENST00000567880 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
TCF4-236ENST00000567880 MT1FP04733 61 aa4.79□□□□□ -1.64
TCF4-236ENST00000567880 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
TCF4-236ENST00000567880 R4GN34 69 aa4.77□□□□□ -1.65
TCF4-236ENST00000567880 M0QZ58 72 aa4.76□□□□□ -1.65
TCF4-236ENST00000567880 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
TCF4-236ENST00000567880 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
TCF4-236ENST00000567880 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
TCF4-236ENST00000567880 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
TCF4-236ENST00000567880 A0A0D9SG42 100 aa4.69□□□□□ -1.66
TCF4-236ENST00000567880 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
TCF4-236ENST00000567880 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
TCF4-236ENST00000567880 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
TCF4-236ENST00000567880 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
TCF4-236ENST00000567880 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
TCF4-236ENST00000567880 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
TCF4-236ENST00000567880 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
TCF4-236ENST00000567880 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
TCF4-236ENST00000567880 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
TCF4-236ENST00000567880 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
TCF4-236ENST00000567880 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
TCF4-236ENST00000567880 MT1BP07438 61 aa4.5□□□□□ -1.69
TCF4-236ENST00000567880 USH2AO75445 5202 aa4.47□□□□□ -1.69
TCF4-236ENST00000567880 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
TCF4-236ENST00000567880 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
TCF4-236ENST00000567880 MT1XP80297 61 aa4.34□□□□□ -1.71
TCF4-236ENST00000567880 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
TCF4-236ENST00000567880 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
TCF4-236ENST00000567880 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
TCF4-236ENST00000567880 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 261.6 ms