RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
RNF40-209ENST00000566703 UQCRQO14949 82 aa6.74□□□□□ -1.33
RNF40-209ENST00000566703 UBL5Q9BZL1 73 aa6.74□□□□□ -1.33
RNF40-209ENST00000566703 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
RNF40-209ENST00000566703 ATOX1O00244 68 aa6.71□□□□□ -1.34
RNF40-209ENST00000566703 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
RNF40-209ENST00000566703 LCA10Q71F78 164 aa6.71□□□□□ -1.34
RNF40-209ENST00000566703 TP53AIP1Q9HCN2 124 aa6.7□□□□□ -1.34
RNF40-209ENST00000566703 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
RNF40-209ENST00000566703 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
RNF40-209ENST00000566703 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
RNF40-209ENST00000566703 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
RNF40-209ENST00000566703 COX7CP15954 63 aa6.67□□□□□ -1.34
RNF40-209ENST00000566703 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
RNF40-209ENST00000566703 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
RNF40-209ENST00000566703 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
RNF40-209ENST00000566703 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
RNF40-209ENST00000566703 TMEM258P61165 79 aa6.59□□□□□ -1.35
RNF40-209ENST00000566703 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
RNF40-209ENST00000566703 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
RNF40-209ENST00000566703 NEBP20929 6669 aa6.57□□□□□ -1.36
RNF40-209ENST00000566703 KRTAP20-1Q3LI63 56 aa6.55□□□□□ -1.36
RNF40-209ENST00000566703 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
RNF40-209ENST00000566703 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
RNF40-209ENST00000566703 A0A087WVE0 104 aa6.49□□□□□ -1.37
RNF40-209ENST00000566703 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
RNF40-209ENST00000566703 H0YAA0 97 aa6.48□□□□□ -1.37
RNF40-209ENST00000566703 TRAV7A0A075B6U4 112 aa6.46□□□□□ -1.38
RNF40-209ENST00000566703 NDUFC1O43677 76 aa6.45□□□□□ -1.38
RNF40-209ENST00000566703 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
RNF40-209ENST00000566703 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
RNF40-209ENST00000566703 KMT2DO14686 5537 aa6.37□□□□□ -1.39
RNF40-209ENST00000566703 A8MUN3 132 aa6.37□□□□□ -1.39
RNF40-209ENST00000566703 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
RNF40-209ENST00000566703 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
RNF40-209ENST00000566703 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
RNF40-209ENST00000566703 H0Y9P7 68 aa6.34□□□□□ -1.39
RNF40-209ENST00000566703 H7BZZ5 65 aa6.34□□□□□ -1.39
RNF40-209ENST00000566703 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
RNF40-209ENST00000566703 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
RNF40-209ENST00000566703 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
RNF40-209ENST00000566703 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
RNF40-209ENST00000566703 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
RNF40-209ENST00000566703 MT1XP80297 61 aa6.29□□□□□ -1.4
RNF40-209ENST00000566703 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
RNF40-209ENST00000566703 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
RNF40-209ENST00000566703 SPRR2EP22531 72 aa6.26□□□□□ -1.41
RNF40-209ENST00000566703 SPRR2BP35325 72 aa6.26□□□□□ -1.41
RNF40-209ENST00000566703 SPRR2AP35326 72 aa6.26□□□□□ -1.41
RNF40-209ENST00000566703 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
RNF40-209ENST00000566703 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
RNF40-209ENST00000566703 OCR1Q9BZK8 76 aa6.23□□□□□ -1.41
RNF40-209ENST00000566703 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
RNF40-209ENST00000566703 R4GN34 69 aa6.21□□□□□ -1.42
RNF40-209ENST00000566703 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
RNF40-209ENST00000566703 MP68P56378 58 aa6.18□□□□□ -1.42
RNF40-209ENST00000566703 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
RNF40-209ENST00000566703 P0C880 135 aa6.16□□□□□ -1.42
RNF40-209ENST00000566703 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
RNF40-209ENST00000566703 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
RNF40-209ENST00000566703 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
RNF40-209ENST00000566703 M0QZ58 72 aa6.13□□□□□ -1.43
RNF40-209ENST00000566703 H3BPC8 53 aa6.11□□□□□ -1.43
RNF40-209ENST00000566703 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
RNF40-209ENST00000566703 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
RNF40-209ENST00000566703 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
RNF40-209ENST00000566703 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
RNF40-209ENST00000566703 V9GYY9 64 aa6.07□□□□□ -1.44
RNF40-209ENST00000566703 Q1T7F1 81 aa6.06□□□□□ -1.44
RNF40-209ENST00000566703 SPRR2DP22532 72 aa6.05□□□□□ -1.44
RNF40-209ENST00000566703 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
RNF40-209ENST00000566703 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
RNF40-209ENST00000566703 KRTAP10-12P60413 245 aa6□□□□□ -1.45
RNF40-209ENST00000566703 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
RNF40-209ENST00000566703 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
RNF40-209ENST00000566703 ACYP2P14621 99 aa5.92□□□□□ -1.46
RNF40-209ENST00000566703 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
RNF40-209ENST00000566703 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
RNF40-209ENST00000566703 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
RNF40-209ENST00000566703 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
RNF40-209ENST00000566703 PSPHP1O15172 72 aa5.75□□□□□ -1.49
RNF40-209ENST00000566703 COA5Q86WW8 74 aa5.75□□□□□ -1.49
RNF40-209ENST00000566703 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
RNF40-209ENST00000566703 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
RNF40-209ENST00000566703 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
RNF40-209ENST00000566703 SEC61GP60059 68 aa5.68□□□□□ -1.5
RNF40-209ENST00000566703 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
RNF40-209ENST00000566703 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
RNF40-209ENST00000566703 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
RNF40-209ENST00000566703 A6NED7 52 aa5.64□□□□□ -1.51
RNF40-209ENST00000566703 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
RNF40-209ENST00000566703 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
RNF40-209ENST00000566703 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
RNF40-209ENST00000566703 MT1EP04732 61 aa5.59□□□□□ -1.51
RNF40-209ENST00000566703 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
RNF40-209ENST00000566703 A8MU10 97 aa5.48□□□□□ -1.53
RNF40-209ENST00000566703 MT1GP13640 62 aa5.48□□□□□ -1.53
RNF40-209ENST00000566703 A0A0D9SG42 100 aa5.47□□□□□ -1.53
RNF40-209ENST00000566703 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
RNF40-209ENST00000566703 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms