RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 ATOX1O00244 68 aa11.03□□□□□ -0.64
TCF4-230ENST00000565908 OCR1Q9BZK8 76 aa11.02□□□□□ -0.65
TCF4-230ENST00000565908 H0Y9P7 68 aa11.01□□□□□ -0.65
TCF4-230ENST00000565908 SMIM20Q8N5G0 67 aa11□□□□□ -0.65
TCF4-230ENST00000565908 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
TCF4-230ENST00000565908 TRAV7A0A075B6U4 112 aa10.92□□□□□ -0.66
TCF4-230ENST00000565908 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
TCF4-230ENST00000565908 MACF1Q9UPN3 7388 aaKnown RBP10.85□□□□□ -0.67
TCF4-230ENST00000565908 SERP2Q8N6R1 65 aa10.84□□□□□ -0.67
TCF4-230ENST00000565908 SPRR2GQ9BYE4 73 aa10.84□□□□□ -0.67
TCF4-230ENST00000565908 MP68P56378 58 aa10.83□□□□□ -0.68
TCF4-230ENST00000565908 LINC00208Q96KT6 92 aa10.83□□□□□ -0.68
TCF4-230ENST00000565908 A8MUN3 132 aa10.8□□□□□ -0.68
TCF4-230ENST00000565908 H3BPC8 53 aa10.79□□□□□ -0.68
TCF4-230ENST00000565908 NDUFC1O43677 76 aa10.79□□□□□ -0.68
TCF4-230ENST00000565908 Q5VV11 94 aa10.78□□□□□ -0.68
TCF4-230ENST00000565908 ANAPC13Q9BS18 74 aa10.77□□□□□ -0.69
TCF4-230ENST00000565908 KRTAP19-8Q3LI54 63 aa10.76□□□□□ -0.69
TCF4-230ENST00000565908 MT1BP07438 61 aa10.74□□□□□ -0.69
TCF4-230ENST00000565908 COX7CP15954 63 aa10.73□□□□□ -0.69
TCF4-230ENST00000565908 CRIPTQ9P021 101 aa10.73□□□□□ -0.69
TCF4-230ENST00000565908 SYNE2Q8WXH0 6885 aaKnown RBP10.7□□□□□ -0.7
TCF4-230ENST00000565908 H0YAA0 97 aa10.67□□□□□ -0.7
TCF4-230ENST00000565908 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
TCF4-230ENST00000565908 A6NN06 94 aa10.63□□□□□ -0.71
TCF4-230ENST00000565908 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
TCF4-230ENST00000565908 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
TCF4-230ENST00000565908 KRTAP6-3Q3LI67 103 aa10.52□□□□□ -0.73
TCF4-230ENST00000565908 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
TCF4-230ENST00000565908 KRTAP10-5P60370 271 aa10.51□□□□□ -0.73
TCF4-230ENST00000565908 DMAC1Q96GE9 116 aa10.49□□□□□ -0.73
TCF4-230ENST00000565908 CYSTM1Q9H1C7 97 aa10.42□□□□□ -0.74
TCF4-230ENST00000565908 H7BZZ5 65 aa10.39□□□□□ -0.75
TCF4-230ENST00000565908 SPANXA2-OT1Q8N9U9 137 aa10.38□□□□□ -0.75
TCF4-230ENST00000565908 PCP4P48539 62 aa10.36□□□□□ -0.75
TCF4-230ENST00000565908 P0C880 135 aa10.29□□□□□ -0.76
TCF4-230ENST00000565908 R4GN34 69 aa10.29□□□□□ -0.76
TCF4-230ENST00000565908 ACYP2P14621 99 aa10.26□□□□□ -0.77
TCF4-230ENST00000565908 PLAC4Q8WY50 150 aa10.21□□□□□ -0.77
TCF4-230ENST00000565908 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
TCF4-230ENST00000565908 M0QZ58 72 aa10.2□□□□□ -0.78
TCF4-230ENST00000565908 TMEM258P61165 79 aa10.2□□□□□ -0.78
TCF4-230ENST00000565908 ATP5EP56381 51 aaPredicted RBP10.19□□□□□ -0.78
TCF4-230ENST00000565908 PRO2289Q9P1D8 64 aa10.18□□□□□ -0.78
TCF4-230ENST00000565908 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
TCF4-230ENST00000565908 MT1XP80297 61 aa10.1□□□□□ -0.79
TCF4-230ENST00000565908 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
TCF4-230ENST00000565908 MUC12Q9UKN1 5478 aa10.07□□□□□ -0.8
TCF4-230ENST00000565908 NEBP20929 6669 aa10.07□□□□□ -0.8
TCF4-230ENST00000565908 KRTAP5-9P26371 169 aa10.06□□□□□ -0.8
TCF4-230ENST00000565908 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
TCF4-230ENST00000565908 COA5Q86WW8 74 aa10.03□□□□□ -0.8
TCF4-230ENST00000565908 KMT2DO14686 5537 aa9.91□□□□□ -0.82
TCF4-230ENST00000565908 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
TCF4-230ENST00000565908 SERP1Q9Y6X1 66 aa9.87□□□□□ -0.83
TCF4-230ENST00000565908 MDN1Q9NU22 5596 aa9.84□□□□□ -0.83
TCF4-230ENST00000565908 KRTAP8-1Q8IUC2 63 aa9.77□□□□□ -0.85
TCF4-230ENST00000565908 SPRR2FQ96RM1 72 aa9.77□□□□□ -0.85
TCF4-230ENST00000565908 KRTAP20-1Q3LI63 56 aa9.71□□□□□ -0.86
TCF4-230ENST00000565908 RPS28P62857 69 aaKnown RBP9.67□□□□□ -0.86
TCF4-230ENST00000565908 KRTAP10-7P60409 375 aaPredicted RBP9.63□□□□□ -0.87
TCF4-230ENST00000565908 KRTAP4-8A0A0G2JLE6 195 aa9.62□□□□□ -0.87
TCF4-230ENST00000565908 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
TCF4-230ENST00000565908 KRTAP4-8Q9BYQ9 185 aa9.62□□□□□ -0.87
TCF4-230ENST00000565908 SPRR2EP22531 72 aa9.61□□□□□ -0.87
TCF4-230ENST00000565908 SPRR2BP35325 72 aa9.61□□□□□ -0.87
TCF4-230ENST00000565908 SPRR2AP35326 72 aa9.61□□□□□ -0.87
TCF4-230ENST00000565908 KRTAP10-12P60413 245 aa9.6□□□□□ -0.87
TCF4-230ENST00000565908 SEC61GP60059 68 aa9.57□□□□□ -0.88
TCF4-230ENST00000565908 SMIM26A0A096LP01 95 aa9.55□□□□□ -0.88
TCF4-230ENST00000565908 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
TCF4-230ENST00000565908 A0A1B0GU69 56 aa9.5□□□□□ -0.89
TCF4-230ENST00000565908 LCE1AQ5T7P2 110 aa9.49□□□□□ -0.89
TCF4-230ENST00000565908 KRTAP2-3P0C7H8 128 aa9.48□□□□□ -0.89
TCF4-230ENST00000565908 KRTAP2-4Q9BYR9 128 aa9.48□□□□□ -0.89
TCF4-230ENST00000565908 V9GYY9 64 aa9.48□□□□□ -0.89
TCF4-230ENST00000565908 CAMK2N1Q7Z7J9 78 aa9.47□□□□□ -0.89
TCF4-230ENST00000565908 Q1T7F1 81 aa9.45□□□□□ -0.9
TCF4-230ENST00000565908 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
TCF4-230ENST00000565908 A0A0D9SG42 100 aa9.36□□□□□ -0.91
TCF4-230ENST00000565908 A0A1B0GU33 70 aa9.36□□□□□ -0.91
TCF4-230ENST00000565908 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
TCF4-230ENST00000565908 SPRR2DP22532 72 aa9.3□□□□□ -0.92
TCF4-230ENST00000565908 PSPHP1O15172 72 aa9.27□□□□□ -0.93
TCF4-230ENST00000565908 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
TCF4-230ENST00000565908 KRTAP2-2Q9BYT5 123 aa9.19□□□□□ -0.94
TCF4-230ENST00000565908 KRTAP2-1Q9BYU5 128 aa9.19□□□□□ -0.94
TCF4-230ENST00000565908 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
TCF4-230ENST00000565908 UQCR11O14957 56 aa9.15□□□□□ -0.94
TCF4-230ENST00000565908 LCE3BQ5TA77 95 aa9.04□□□□□ -0.96
TCF4-230ENST00000565908 KRTAP19-7Q3SYF9 63 aa9.02□□□□□ -0.97
TCF4-230ENST00000565908 A6NED7 52 aa9.01□□□□□ -0.97
TCF4-230ENST00000565908 MIR22HGQ0VDD5 57 aa9.01□□□□□ -0.97
TCF4-230ENST00000565908 A8MU10 97 aa9□□□□□ -0.97
TCF4-230ENST00000565908 MT1EP04732 61 aa8.95□□□□□ -0.98
TCF4-230ENST00000565908 LCE5AQ5TCM9 118 aa8.88□□□□□ -0.99
TCF4-230ENST00000565908 KRTAP19-3Q7Z4W3 81 aa8.87□□□□□ -0.99
TCF4-230ENST00000565908 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
TCF4-230ENST00000565908 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
TCF4-230ENST00000565908 TNP1P09430 55 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms