RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ACYP2P14621 99 aa9.43□□□□□ -0.9
COMMD4-213ENST00000565834 COA5Q86WW8 74 aa9.42□□□□□ -0.9
COMMD4-213ENST00000565834 H1FX-AS1Q4G0G2 97 aa9.37□□□□□ -0.91
COMMD4-213ENST00000565834 KRTAP19-2Q3LHN2 52 aa9.36□□□□□ -0.91
COMMD4-213ENST00000565834 BRK1Q8WUW1 75 aa9.32□□□□□ -0.92
COMMD4-213ENST00000565834 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
COMMD4-213ENST00000565834 PSPHP1O15172 72 aa9.27□□□□□ -0.93
COMMD4-213ENST00000565834 S4R3F8 94 aa9.27□□□□□ -0.93
COMMD4-213ENST00000565834 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
COMMD4-213ENST00000565834 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
COMMD4-213ENST00000565834 Q5VV11 94 aa9.22□□□□□ -0.93
COMMD4-213ENST00000565834 LCA10Q71F78 164 aa9.22□□□□□ -0.93
COMMD4-213ENST00000565834 FLGP20930 4061 aaPredicted RBP9.21□□□□□ -0.93
COMMD4-213ENST00000565834 PRR15LQ9BU68 103 aa9.21□□□□□ -0.93
COMMD4-213ENST00000565834 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
COMMD4-213ENST00000565834 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
COMMD4-213ENST00000565834 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
COMMD4-213ENST00000565834 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
COMMD4-213ENST00000565834 MT1HP80294 61 aa9.07□□□□□ -0.96
COMMD4-213ENST00000565834 A6NED7 52 aa9.06□□□□□ -0.96
COMMD4-213ENST00000565834 M0R2T5 61 aa9□□□□□ -0.97
COMMD4-213ENST00000565834 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
COMMD4-213ENST00000565834 A0A1B0GU69 56 aa8.94□□□□□ -0.98
COMMD4-213ENST00000565834 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
COMMD4-213ENST00000565834 SEC61GP60059 68 aa8.85□□□□□ -0.99
COMMD4-213ENST00000565834 PMAIP1Q13794 54 aa8.85□□□□□ -0.99
COMMD4-213ENST00000565834 H0YAA0 97 aa8.85□□□□□ -0.99
COMMD4-213ENST00000565834 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
COMMD4-213ENST00000565834 UQCR11O14957 56 aa8.8□□□□□ -1
COMMD4-213ENST00000565834 A8MU10 97 aa8.78□□□□□ -1
COMMD4-213ENST00000565834 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
COMMD4-213ENST00000565834 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
COMMD4-213ENST00000565834 SPATA8Q6RVD6 105 aa8.75□□□□□ -1.01
COMMD4-213ENST00000565834 P0C880 135 aa8.74□□□□□ -1.01
COMMD4-213ENST00000565834 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
COMMD4-213ENST00000565834 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
COMMD4-213ENST00000565834 A6NN06 94 aa8.69□□□□□ -1.02
COMMD4-213ENST00000565834 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
COMMD4-213ENST00000565834 KTN1-AS1Q86SY8 53 aa8.67□□□□□ -1.02
COMMD4-213ENST00000565834 MT2AP02795 61 aa8.66□□□□□ -1.02
COMMD4-213ENST00000565834 A0A1B0GU33 70 aa8.62□□□□□ -1.03
COMMD4-213ENST00000565834 MT1FP04733 61 aa8.61□□□□□ -1.03
COMMD4-213ENST00000565834 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
COMMD4-213ENST00000565834 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
COMMD4-213ENST00000565834 R4GN34 69 aa8.54□□□□□ -1.04
COMMD4-213ENST00000565834 M0QZ58 72 aa8.51□□□□□ -1.05
COMMD4-213ENST00000565834 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
COMMD4-213ENST00000565834 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.07
COMMD4-213ENST00000565834 KRTAP9-3Q9BYQ3 159 aa8.39□□□□□ -1.07
COMMD4-213ENST00000565834 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
COMMD4-213ENST00000565834 LINC01554Q52M75 96 aa8.37□□□□□ -1.07
COMMD4-213ENST00000565834 A0A0D9SG42 100 aa8.34□□□□□ -1.08
COMMD4-213ENST00000565834 K7ERS5 55 aa8.34□□□□□ -1.08
COMMD4-213ENST00000565834 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.08
COMMD4-213ENST00000565834 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
COMMD4-213ENST00000565834 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
COMMD4-213ENST00000565834 LCE2BO14633 110 aa8.19□□□□□ -1.1
COMMD4-213ENST00000565834 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
COMMD4-213ENST00000565834 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
COMMD4-213ENST00000565834 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
COMMD4-213ENST00000565834 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
COMMD4-213ENST00000565834 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
COMMD4-213ENST00000565834 MT1BP07438 61 aa8.1□□□□□ -1.11
COMMD4-213ENST00000565834 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
COMMD4-213ENST00000565834 USH2AO75445 5202 aa8.01□□□□□ -1.13
COMMD4-213ENST00000565834 ROMO1P60602 79 aa7.98□□□□□ -1.13
COMMD4-213ENST00000565834 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
COMMD4-213ENST00000565834 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
COMMD4-213ENST00000565834 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
COMMD4-213ENST00000565834 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
COMMD4-213ENST00000565834 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
COMMD4-213ENST00000565834 MT1XP80297 61 aa7.8□□□□□ -1.16
COMMD4-213ENST00000565834 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
COMMD4-213ENST00000565834 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
COMMD4-213ENST00000565834 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
COMMD4-213ENST00000565834 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
COMMD4-213ENST00000565834 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
COMMD4-213ENST00000565834 H3BS24 57 aa7.55□□□□□ -1.2
COMMD4-213ENST00000565834 TNP1P09430 55 aa7.55□□□□□ -1.2
COMMD4-213ENST00000565834 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
COMMD4-213ENST00000565834 KRTAP10-12P60413 245 aa7.4□□□□□ -1.23
COMMD4-213ENST00000565834 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.37□□□□□ -1.23
COMMD4-213ENST00000565834 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
COMMD4-213ENST00000565834 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
COMMD4-213ENST00000565834 LCE3AQ5TA76 89 aa7.26□□□□□ -1.25
COMMD4-213ENST00000565834 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
COMMD4-213ENST00000565834 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
COMMD4-213ENST00000565834 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
COMMD4-213ENST00000565834 KMT2DO14686 5537 aa7.2□□□□□ -1.26
COMMD4-213ENST00000565834 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
COMMD4-213ENST00000565834 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
COMMD4-213ENST00000565834 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
COMMD4-213ENST00000565834 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
COMMD4-213ENST00000565834 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
COMMD4-213ENST00000565834 KRTAP6-3Q3LI67 103 aa7□□□□□ -1.29
COMMD4-213ENST00000565834 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
COMMD4-213ENST00000565834 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
COMMD4-213ENST00000565834 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
COMMD4-213ENST00000565834 MT1EP04732 61 aa6.86□□□□□ -1.31
COMMD4-213ENST00000565834 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms