RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 C7orf65Q6ZTY9 151 aa3.03□□□□□ -1.92
TCF4-228ENST00000565393 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
TCF4-228ENST00000565393 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
TCF4-228ENST00000565393 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
TCF4-228ENST00000565393 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
TCF4-228ENST00000565393 CXCL6P80162 114 aa3□□□□□ -1.93
TCF4-228ENST00000565393 UBL5Q9BZL1 73 aa3□□□□□ -1.93
TCF4-228ENST00000565393 USH2AO75445 5202 aa3□□□□□ -1.93
TCF4-228ENST00000565393 A0A087WVE0 104 aa2.98□□□□□ -1.93
TCF4-228ENST00000565393 NDUFC1O43677 76 aa2.98□□□□□ -1.93
TCF4-228ENST00000565393 TRAV7A0A075B6U4 112 aa2.97□□□□□ -1.93
TCF4-228ENST00000565393 ATP5EP2Q5VTU8 51 aa2.97□□□□□ -1.93
TCF4-228ENST00000565393 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
TCF4-228ENST00000565393 H3BS24 57 aa2.96□□□□□ -1.94
TCF4-228ENST00000565393 H7BZZ5 65 aa2.96□□□□□ -1.94
TCF4-228ENST00000565393 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
TCF4-228ENST00000565393 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
TCF4-228ENST00000565393 S4R3F8 94 aa2.95□□□□□ -1.94
TCF4-228ENST00000565393 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
TCF4-228ENST00000565393 KRTAP3-1Q9BYR8 98 aa2.94□□□□□ -1.94
TCF4-228ENST00000565393 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
TCF4-228ENST00000565393 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
TCF4-228ENST00000565393 KLKP1Q107X0 134 aa2.93□□□□□ -1.94
TCF4-228ENST00000565393 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
TCF4-228ENST00000565393 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
TCF4-228ENST00000565393 LCA10Q71F78 164 aa2.92□□□□□ -1.94
TCF4-228ENST00000565393 A6NN06 94 aa2.91□□□□□ -1.94
TCF4-228ENST00000565393 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
TCF4-228ENST00000565393 Q5VV11 94 aa2.9□□□□□ -1.95
TCF4-228ENST00000565393 Q1T7F1 81 aa2.89□□□□□ -1.95
TCF4-228ENST00000565393 CYP4F30PQ9H0H9 118 aa2.88□□□□□ -1.95
TCF4-228ENST00000565393 PSPHP1O15172 72 aa2.87□□□□□ -1.95
TCF4-228ENST00000565393 SPTSSBQ8NFR3 76 aa2.87□□□□□ -1.95
TCF4-228ENST00000565393 MT1BP07438 61 aa2.86□□□□□ -1.95
TCF4-228ENST00000565393 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
TCF4-228ENST00000565393 KRTAP3-3Q9BYR6 98 aa2.86□□□□□ -1.95
TCF4-228ENST00000565393 TRAV22A0A0B4J277 110 aa2.85□□□□□ -1.95
TCF4-228ENST00000565393 LOC101927531A0A1B0GV80 90 aa2.85□□□□□ -1.95
TCF4-228ENST00000565393 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
TCF4-228ENST00000565393 CHKB-CPT1BH3BT56 60 aa2.84□□□□□ -1.95
TCF4-228ENST00000565393 A8MUN3 132 aa2.83□□□□□ -1.96
TCF4-228ENST00000565393 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
TCF4-228ENST00000565393 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
TCF4-228ENST00000565393 H0Y9P7 68 aa2.81□□□□□ -1.96
TCF4-228ENST00000565393 A6NED7 52 aa2.8□□□□□ -1.96
TCF4-228ENST00000565393 MP68P56378 58 aa2.8□□□□□ -1.96
TCF4-228ENST00000565393 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
TCF4-228ENST00000565393 ADM2Q7Z4H4 148 aa2.79□□□□□ -1.96
TCF4-228ENST00000565393 NEBP20929 6669 aa2.78□□□□□ -1.96
TCF4-228ENST00000565393 LINC00208Q96KT6 92 aa2.78□□□□□ -1.96
TCF4-228ENST00000565393 A8MU10 97 aa2.77□□□□□ -1.97
TCF4-228ENST00000565393 H0YAA0 97 aa2.77□□□□□ -1.97
TCF4-228ENST00000565393 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
TCF4-228ENST00000565393 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
TCF4-228ENST00000565393 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
TCF4-228ENST00000565393 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
TCF4-228ENST00000565393 OCR1Q9BZK8 76 aa2.75□□□□□ -1.97
TCF4-228ENST00000565393 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
TCF4-228ENST00000565393 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
TCF4-228ENST00000565393 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
TCF4-228ENST00000565393 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
TCF4-228ENST00000565393 R4GN34 69 aa2.72□□□□□ -1.97
TCF4-228ENST00000565393 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
TCF4-228ENST00000565393 M0QZ58 72 aa2.69□□□□□ -1.98
TCF4-228ENST00000565393 P0C880 135 aa2.69□□□□□ -1.98
TCF4-228ENST00000565393 H3BPC8 53 aa2.68□□□□□ -1.98
TCF4-228ENST00000565393 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
TCF4-228ENST00000565393 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 MT1XP80297 61 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 SPANXA2-OT1Q8N9U9 137 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
TCF4-228ENST00000565393 KMT2DO14686 5537 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 SPRR2EP22531 72 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 SPRR2BP35325 72 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 SPRR2AP35326 72 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 COA5Q86WW8 74 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 DMAC1Q96GE9 116 aa2.66□□□□□ -1.98
TCF4-228ENST00000565393 ACYP2P14621 99 aa2.64□□□□□ -1.99
TCF4-228ENST00000565393 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
TCF4-228ENST00000565393 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
TCF4-228ENST00000565393 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
TCF4-228ENST00000565393 KRTAP4-8Q9BYQ9 185 aa2.61□□□□□ -1.99
TCF4-228ENST00000565393 LCE1AQ5T7P2 110 aa2.59□□□□□ -1.99
TCF4-228ENST00000565393 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
TCF4-228ENST00000565393 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
TCF4-228ENST00000565393 MDN1Q9NU22 5596 aa2.57□□□□□ -2
TCF4-228ENST00000565393 SPRR2DP22532 72 aa2.57□□□□□ -2
TCF4-228ENST00000565393 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
TCF4-228ENST00000565393 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
TCF4-228ENST00000565393 ROMO1P60602 79 aa2.55□□□□□ -2
TCF4-228ENST00000565393 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
TCF4-228ENST00000565393 KRTAP10-12P60413 245 aa2.54□□□□□ -2
TCF4-228ENST00000565393 SPATA8Q6RVD6 105 aa2.54□□□□□ -2
TCF4-228ENST00000565393 A0A1B0GU69 56 aa2.52□□□□□ -2.01
TCF4-228ENST00000565393 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
TCF4-228ENST00000565393 UQCR11O14957 56 aa2.51□□□□□ -2.01
TCF4-228ENST00000565393 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
TCF4-228ENST00000565393 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms