RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 A8MUU9 505 aa3.95□□□□□ -1.78
SMG1-210ENST00000565224 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SMG1-210ENST00000565224 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
SMG1-210ENST00000565224 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
SMG1-210ENST00000565224 C9orf92A6NGG3 77 aa3.94□□□□□ -1.78
SMG1-210ENST00000565224 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
SMG1-210ENST00000565224 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
SMG1-210ENST00000565224 FLG2Q5D862 2391 aaPredicted RBP3.92□□□□□ -1.78
SMG1-210ENST00000565224 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
SMG1-210ENST00000565224 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
SMG1-210ENST00000565224 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
SMG1-210ENST00000565224 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.79
SMG1-210ENST00000565224 HERC1Q15751 4861 aa3.88□□□□□ -1.79
SMG1-210ENST00000565224 H0YAA0 97 aa3.87□□□□□ -1.79
SMG1-210ENST00000565224 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
SMG1-210ENST00000565224 A0A1B0GU33 70 aa3.85□□□□□ -1.79
SMG1-210ENST00000565224 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.79
SMG1-210ENST00000565224 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
SMG1-210ENST00000565224 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
SMG1-210ENST00000565224 CSAG1Q6PB30 78 aa3.83□□□□□ -1.8
SMG1-210ENST00000565224 ROMO1P60602 79 aa3.81□□□□□ -1.8
SMG1-210ENST00000565224 FAT3Q8TDW7 4589 aa3.79□□□□□ -1.8
SMG1-210ENST00000565224 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
SMG1-210ENST00000565224 TNXBP22105 4242 aa3.77□□□□□ -1.81
SMG1-210ENST00000565224 K7ERS5 55 aa3.76□□□□□ -1.81
SMG1-210ENST00000565224 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
SMG1-210ENST00000565224 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
SMG1-210ENST00000565224 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
SMG1-210ENST00000565224 Q5VSD8 79 aa3.73□□□□□ -1.81
SMG1-210ENST00000565224 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
SMG1-210ENST00000565224 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.81
SMG1-210ENST00000565224 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
SMG1-210ENST00000565224 S4R3F8 94 aa3.7□□□□□ -1.82
SMG1-210ENST00000565224 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
SMG1-210ENST00000565224 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
SMG1-210ENST00000565224 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
SMG1-210ENST00000565224 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
SMG1-210ENST00000565224 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
SMG1-210ENST00000565224 A0A0D9SG42 100 aa3.66□□□□□ -1.82
SMG1-210ENST00000565224 P0C880 135 aa3.66□□□□□ -1.82
SMG1-210ENST00000565224 LRP2P98164 4655 aa3.66□□□□□ -1.82
SMG1-210ENST00000565224 CRIPTQ9P021 101 aa3.65□□□□□ -1.83
SMG1-210ENST00000565224 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
SMG1-210ENST00000565224 MT1HL1P0DM35 61 aa3.62□□□□□ -1.83
SMG1-210ENST00000565224 LPAP08519 4548 aa3.61□□□□□ -1.83
SMG1-210ENST00000565224 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
SMG1-210ENST00000565224 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
SMG1-210ENST00000565224 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
SMG1-210ENST00000565224 MUC2Q02817 5179 aa3.57□□□□□ -1.84
SMG1-210ENST00000565224 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
SMG1-210ENST00000565224 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
SMG1-210ENST00000565224 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
SMG1-210ENST00000565224 M0QZ58 72 aa3.54□□□□□ -1.84
SMG1-210ENST00000565224 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
SMG1-210ENST00000565224 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
SMG1-210ENST00000565224 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
SMG1-210ENST00000565224 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
SMG1-210ENST00000565224 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
SMG1-210ENST00000565224 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
SMG1-210ENST00000565224 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SMG1-210ENST00000565224 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
SMG1-210ENST00000565224 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
SMG1-210ENST00000565224 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
SMG1-210ENST00000565224 R4GN34 69 aa3.44□□□□□ -1.86
SMG1-210ENST00000565224 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
SMG1-210ENST00000565224 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
SMG1-210ENST00000565224 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
SMG1-210ENST00000565224 KRTAP4-1Q9BYQ7 146 aa3.37□□□□□ -1.87
SMG1-210ENST00000565224 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
SMG1-210ENST00000565224 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
SMG1-210ENST00000565224 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
SMG1-210ENST00000565224 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
SMG1-210ENST00000565224 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
SMG1-210ENST00000565224 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
SMG1-210ENST00000565224 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
SMG1-210ENST00000565224 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
SMG1-210ENST00000565224 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
SMG1-210ENST00000565224 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
SMG1-210ENST00000565224 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
SMG1-210ENST00000565224 TNP1P09430 55 aa3.15□□□□□ -1.9
SMG1-210ENST00000565224 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SMG1-210ENST00000565224 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
SMG1-210ENST00000565224 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
SMG1-210ENST00000565224 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
SMG1-210ENST00000565224 M0R2T5 61 aa3.04□□□□□ -1.92
SMG1-210ENST00000565224 MT1HP80294 61 aa3.04□□□□□ -1.92
SMG1-210ENST00000565224 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
SMG1-210ENST00000565224 USH2AO75445 5202 aa3□□□□□ -1.93
SMG1-210ENST00000565224 MT1FP04733 61 aa3□□□□□ -1.93
SMG1-210ENST00000565224 MT2AP02795 61 aa2.99□□□□□ -1.93
SMG1-210ENST00000565224 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
SMG1-210ENST00000565224 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
SMG1-210ENST00000565224 INE1O15225 51 aa2.97□□□□□ -1.93
SMG1-210ENST00000565224 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
SMG1-210ENST00000565224 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
SMG1-210ENST00000565224 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
SMG1-210ENST00000565224 MT1BP07438 61 aa2.9□□□□□ -1.94
SMG1-210ENST00000565224 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
SMG1-210ENST00000565224 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
SMG1-210ENST00000565224 MT1XP80297 61 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms