RNA–Protein interactions for RNA: ENST00000565042.5

ATP2A1-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 239 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-209ENST00000565042 STAB2Q8WWQ8 2551 aa2.5□□□□□ -2.01
ATP2A1-209ENST00000565042 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
ATP2A1-209ENST00000565042 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
ATP2A1-209ENST00000565042 DEFB4AO15263 64 aa2.49□□□□□ -2.01
ATP2A1-209ENST00000565042 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
ATP2A1-209ENST00000565042 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
ATP2A1-209ENST00000565042 RYR2Q92736 4967 aa2.46□□□□□ -2.02
ATP2A1-209ENST00000565042 HERC2O95714 4834 aa2.44□□□□□ -2.02
ATP2A1-209ENST00000565042 TNP1P09430 55 aa2.44□□□□□ -2.02
ATP2A1-209ENST00000565042 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
ATP2A1-209ENST00000565042 DYNC2H1Q8NCM8 4307 aaKnown RBP2.43□□□□□ -2.02
ATP2A1-209ENST00000565042 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
ATP2A1-209ENST00000565042 KRTAP4-8A0A0G2JLE6 195 aa2.41□□□□□ -2.02
ATP2A1-209ENST00000565042 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
ATP2A1-209ENST00000565042 SACSQ9NZJ4 4579 aa2.4□□□□□ -2.03
ATP2A1-209ENST00000565042 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
ATP2A1-209ENST00000565042 DNAH3Q8TD57 4116 aa2.39□□□□□ -2.03
ATP2A1-209ENST00000565042 LYSTQ99698 3801 aa2.38□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP10-3P60369 221 aa2.38□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP9-8Q9BYQ0 159 aa2.38□□□□□ -2.03
ATP2A1-209ENST00000565042 CSMD3Q7Z407 3707 aa2.37□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
ATP2A1-209ENST00000565042 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
ATP2A1-209ENST00000565042 DNAH9Q9NYC9 4486 aa2.35□□□□□ -2.03
ATP2A1-209ENST00000565042 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
ATP2A1-209ENST00000565042 FRAS1Q86XX4 4008 aa2.33□□□□□ -2.04
ATP2A1-209ENST00000565042 HECTD4Q9Y4D8 3996 aa2.33□□□□□ -2.04
ATP2A1-209ENST00000565042 DNAH7Q8WXX0 4024 aa2.33□□□□□ -2.04
ATP2A1-209ENST00000565042 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
ATP2A1-209ENST00000565042 HERC1Q15751 4861 aa2.31□□□□□ -2.04
ATP2A1-209ENST00000565042 KRTAP10-11P60412 298 aa2.31□□□□□ -2.04
ATP2A1-209ENST00000565042 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
ATP2A1-209ENST00000565042 SRRM2Q9UQ35 2752 aaKnown RBP2.29□□□□□ -2.04
ATP2A1-209ENST00000565042 KRTAP4-5Q9BYR2 181 aa2.28□□□□□ -2.04
ATP2A1-209ENST00000565042 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
ATP2A1-209ENST00000565042 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
ATP2A1-209ENST00000565042 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
ATP2A1-209ENST00000565042 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
ATP2A1-209ENST00000565042 KRTAP1-5Q9BYS1 174 aa2.24□□□□□ -2.05
ATP2A1-209ENST00000565042 MT3P25713 68 aa2.23□□□□□ -2.05
ATP2A1-209ENST00000565042 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
ATP2A1-209ENST00000565042 DNAH10Q8IVF4 4471 aa2.22□□□□□ -2.05
ATP2A1-209ENST00000565042 LCE1DQ5T752 114 aa2.22□□□□□ -2.05
ATP2A1-209ENST00000565042 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.05
ATP2A1-209ENST00000565042 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
ATP2A1-209ENST00000565042 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
ATP2A1-209ENST00000565042 KRTAP4-9Q9BYQ8 210 aa2.2□□□□□ -2.06
ATP2A1-209ENST00000565042 KMT2AQ03164 3969 aa2.19□□□□□ -2.06
ATP2A1-209ENST00000565042 PKHD1P08F94 4074 aa2.19□□□□□ -2.06
ATP2A1-209ENST00000565042 HSPG2P98160 4391 aa2.16□□□□□ -2.06
ATP2A1-209ENST00000565042 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
ATP2A1-209ENST00000565042 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
ATP2A1-209ENST00000565042 RNF213Q63HN8 5207 aa2.15□□□□□ -2.07
ATP2A1-209ENST00000565042 DNAH2Q9P225 4427 aa2.13□□□□□ -2.07
ATP2A1-209ENST00000565042 DYNC1H1Q14204 4646 aaKnown RBP2.13□□□□□ -2.07
ATP2A1-209ENST00000565042 DNAH11Q96DT5 4516 aa2.12□□□□□ -2.07
ATP2A1-209ENST00000565042 PKD1P98161 4303 aa2.12□□□□□ -2.07
ATP2A1-209ENST00000565042 M0R2T5 61 aa2.11□□□□□ -2.07
ATP2A1-209ENST00000565042 DNAH6Q9C0G6 4158 aa2.11□□□□□ -2.07
ATP2A1-209ENST00000565042 DNAH17Q9UFH2 4485 aa2.11□□□□□ -2.07
ATP2A1-209ENST00000565042 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
ATP2A1-209ENST00000565042 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
ATP2A1-209ENST00000565042 MYCBP2O75592 4640 aa2.09□□□□□ -2.07
ATP2A1-209ENST00000565042 APOBP04114 4563 aaKnown RBP2.08□□□□□ -2.08
ATP2A1-209ENST00000565042 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
ATP2A1-209ENST00000565042 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
ATP2A1-209ENST00000565042 MUC2Q02817 5179 aa2.06□□□□□ -2.08
ATP2A1-209ENST00000565042 KRTAP19-1Q8IUB9 90 aa2.05□□□□□ -2.08
ATP2A1-209ENST00000565042 VPS13BQ7Z7G8 4022 aa2.05□□□□□ -2.08
ATP2A1-209ENST00000565042 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.08
ATP2A1-209ENST00000565042 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
ATP2A1-209ENST00000565042 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
ATP2A1-209ENST00000565042 KRTAP10-2P60368 255 aa2.02□□□□□ -2.09
ATP2A1-209ENST00000565042 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
ATP2A1-209ENST00000565042 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
ATP2A1-209ENST00000565042 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
ATP2A1-209ENST00000565042 LRP2P98164 4655 aa1.99□□□□□ -2.09
ATP2A1-209ENST00000565042 SMR3BP02814 79 aaPredicted RBP1.99□□□□□ -2.09
ATP2A1-209ENST00000565042 FAT1Q14517 4588 aa1.99□□□□□ -2.09
ATP2A1-209ENST00000565042 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
ATP2A1-209ENST00000565042 LCE5AQ5TCM9 118 aa1.98□□□□□ -2.09
ATP2A1-209ENST00000565042 PKHD1L1Q86WI1 4243 aa1.98□□□□□ -2.09
ATP2A1-209ENST00000565042 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
ATP2A1-209ENST00000565042 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
ATP2A1-209ENST00000565042 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
ATP2A1-209ENST00000565042 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
ATP2A1-209ENST00000565042 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
ATP2A1-209ENST00000565042 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
ATP2A1-209ENST00000565042 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
ATP2A1-209ENST00000565042 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
ATP2A1-209ENST00000565042 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
ATP2A1-209ENST00000565042 KRTAP10-4P60372 401 aaPredicted RBP1.9□□□□□ -2.11
ATP2A1-209ENST00000565042 TNXBP22105 4242 aa1.89□□□□□ -2.11
ATP2A1-209ENST00000565042 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
ATP2A1-209ENST00000565042 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
ATP2A1-209ENST00000565042 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
ATP2A1-209ENST00000565042 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms