RNA–Protein interactions for RNA: ENST00000565042.5

ATP2A1-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 239 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-209ENST00000565042 MYT1Q01538 1121 aa10.27□□□□□ -0.77
ATP2A1-209ENST00000565042 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
ATP2A1-209ENST00000565042 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
ATP2A1-209ENST00000565042 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
ATP2A1-209ENST00000565042 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
ATP2A1-209ENST00000565042 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
ATP2A1-209ENST00000565042 APLP2Q06481 763 aa9.11□□□□□ -0.95
ATP2A1-209ENST00000565042 PRKCSHP14314 528 aaPredicted RBP8.9□□□□□ -0.98
ATP2A1-209ENST00000565042 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.02
ATP2A1-209ENST00000565042 NCBP3Q53F19 620 aaKnown RBP8.69□□□□□ -1.02
ATP2A1-209ENST00000565042 EIF5BO60841 1220 aaKnown RBP8.63□□□□□ -1.03
ATP2A1-209ENST00000565042 ARXQ96QS3 562 aa8.63□□□□□ -1.03
ATP2A1-209ENST00000565042 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
ATP2A1-209ENST00000565042 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
ATP2A1-209ENST00000565042 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
ATP2A1-209ENST00000565042 HRCP23327 699 aa8.35□□□□□ -1.07
ATP2A1-209ENST00000565042 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
ATP2A1-209ENST00000565042 EHMT2Q96KQ7 1210 aa8.28□□□□□ -1.08
ATP2A1-209ENST00000565042 UBE2Q2Q8WVN8 375 aa8.22□□□□□ -1.09
ATP2A1-209ENST00000565042 RTN4Q9NQC3 1192 aaKnown RBP8.21□□□□□ -1.1
ATP2A1-209ENST00000565042 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
ATP2A1-209ENST00000565042 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
ATP2A1-209ENST00000565042 NEFLP07196 543 aa8.16□□□□□ -1.1
ATP2A1-209ENST00000565042 DCAF8L2P0C7V8 631 aa8.15□□□□□ -1.1
ATP2A1-209ENST00000565042 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
ATP2A1-209ENST00000565042 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
ATP2A1-209ENST00000565042 ANP32EQ9BTT0 268 aa8.1□□□□□ -1.11
ATP2A1-209ENST00000565042 ERICH6BQ5W0A0 696 aa8.07□□□□□ -1.12
ATP2A1-209ENST00000565042 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
ATP2A1-209ENST00000565042 FBXO3Q9UK99 471 aa8.04□□□□□ -1.12
ATP2A1-209ENST00000565042 TIMELESSQ9UNS1 1208 aa8.02□□□□□ -1.13
ATP2A1-209ENST00000565042 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
ATP2A1-209ENST00000565042 CLSPNQ9HAW4 1339 aa7.99□□□□□ -1.13
ATP2A1-209ENST00000565042 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 GLIPR1L2Q4G1C9 344 aa7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 ZNF326Q5BKZ1 582 aaKnown RBP7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 PLPPR3Q6T4P5 718 aa7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 BCANQ96GW7 911 aa7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
ATP2A1-209ENST00000565042 PDIA4P13667 645 aaKnown RBP7.95□□□□□ -1.14
ATP2A1-209ENST00000565042 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
ATP2A1-209ENST00000565042 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
ATP2A1-209ENST00000565042 KLHL34Q8N239 644 aa7.93□□□□□ -1.14
ATP2A1-209ENST00000565042 HMGB1P09429 215 aaKnown RBP7.92□□□□□ -1.14
ATP2A1-209ENST00000565042 TAF7LQ5H9L4 462 aa7.92□□□□□ -1.14
ATP2A1-209ENST00000565042 TAOK2Q9UL54 1235 aa7.91□□□□□ -1.14
ATP2A1-209ENST00000565042 PLEKHG5O94827 1062 aa7.87□□□□□ -1.15
ATP2A1-209ENST00000565042 PDE4CQ08493 712 aa7.87□□□□□ -1.15
ATP2A1-209ENST00000565042 YTHDC1Q96MU7 727 aaKnown RBP7.83□□□□□ -1.16
ATP2A1-209ENST00000565042 BRD2P25440 801 aaKnown RBP7.82□□□□□ -1.16
ATP2A1-209ENST00000565042 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
ATP2A1-209ENST00000565042 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
ATP2A1-209ENST00000565042 CDK11BP21127 795 aaKnown RBP7.78□□□□□ -1.16
ATP2A1-209ENST00000565042 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
ATP2A1-209ENST00000565042 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
ATP2A1-209ENST00000565042 ARID3AQ99856 593 aa7.72□□□□□ -1.17
ATP2A1-209ENST00000565042 FGD1P98174 961 aa7.71□□□□□ -1.18
ATP2A1-209ENST00000565042 CSRNP3Q8WYN3 585 aa7.71□□□□□ -1.18
ATP2A1-209ENST00000565042 BCCIPQ9P287 314 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATP2A1-209ENST00000565042 CHIC1Q5VXU3 224 aa7.69□□□□□ -1.18
ATP2A1-209ENST00000565042 ANO8Q9HCE9 1232 aaPredicted RBP7.67□□□□□ -1.18
ATP2A1-209ENST00000565042 KCNA4P22459 653 aa7.66□□□□□ -1.18
ATP2A1-209ENST00000565042 CNKSR2Q8WXI2 1034 aa7.66□□□□□ -1.18
ATP2A1-209ENST00000565042 CCER1Q8TC90 406 aaPredicted RBP7.65□□□□□ -1.18
ATP2A1-209ENST00000565042 SHROOM4Q9ULL8 1493 aa7.63□□□□□ -1.19
ATP2A1-209ENST00000565042 RSPH4AQ5TD94 716 aa7.62□□□□□ -1.19
ATP2A1-209ENST00000565042 NEUROD1Q13562 356 aa7.59□□□□□ -1.19
ATP2A1-209ENST00000565042 NAP1L5Q96NT1 182 aaPredicted RBP7.59□□□□□ -1.19
ATP2A1-209ENST00000565042 TMEM132AQ24JP5 1023 aa7.58□□□□□ -1.2
ATP2A1-209ENST00000565042 CHMP4AQ9BY43 222 aa7.58□□□□□ -1.2
ATP2A1-209ENST00000565042 RSPH6AQ9H0K4 717 aa7.58□□□□□ -1.2
ATP2A1-209ENST00000565042 NCLP19338 710 aaKnown RBP7.56□□□□□ -1.2
ATP2A1-209ENST00000565042 PLCB2Q00722 1185 aa7.55□□□□□ -1.2
ATP2A1-209ENST00000565042 AAMPQ13685 434 aa7.54□□□□□ -1.2
ATP2A1-209ENST00000565042 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
ATP2A1-209ENST00000565042 POLR3GLQ9BT43 218 aa7.51□□□□□ -1.21
ATP2A1-209ENST00000565042 BCL11BQ9C0K0 894 aaPredicted RBP7.51□□□□□ -1.21
ATP2A1-209ENST00000565042 DCAF1Q9Y4B6 1507 aa7.51□□□□□ -1.21
ATP2A1-209ENST00000565042 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
ATP2A1-209ENST00000565042 CCDC180Q9P1Z9 1646 aa7.49□□□□□ -1.21
ATP2A1-209ENST00000565042 CLSTN1O94985 981 aa7.48□□□□□ -1.21
ATP2A1-209ENST00000565042 SAMD1Q6SPF0 538 aaPredicted RBP7.47□□□□□ -1.21
ATP2A1-209ENST00000565042 PCGF6Q9BYE7 350 aa7.47□□□□□ -1.21
ATP2A1-209ENST00000565042 CCDC9Q9Y3X0 531 aaKnown RBP7.47□□□□□ -1.21
ATP2A1-209ENST00000565042 SALL2Q9Y467 1007 aaPredicted RBP7.47□□□□□ -1.21
ATP2A1-209ENST00000565042 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
ATP2A1-209ENST00000565042 PTMSP20962 102 aa7.45□□□□□ -1.22
ATP2A1-209ENST00000565042 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
ATP2A1-209ENST00000565042 VSIG10Q8N0Z9 540 aa7.45□□□□□ -1.22
ATP2A1-209ENST00000565042 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
ATP2A1-209ENST00000565042 ZMYND15Q9H091 742 aa7.44□□□□□ -1.22
ATP2A1-209ENST00000565042 NEFMP07197 916 aa7.43□□□□□ -1.22
ATP2A1-209ENST00000565042 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
ATP2A1-209ENST00000565042 ANP32BQ92688 251 aaKnown RBP7.43□□□□□ -1.22
ATP2A1-209ENST00000565042 PUS7Q96PZ0 661 aaKnown RBP7.43□□□□□ -1.22
ATP2A1-209ENST00000565042 DEKP35659 375 aaKnown RBP7.42□□□□□ -1.22
ATP2A1-209ENST00000565042 AEBP2Q6ZN18 517 aaPredicted RBP7.42□□□□□ -1.22
ATP2A1-209ENST00000565042 LOC105371045A0A1W2PR82 267 aa7.41□□□□□ -1.22
ATP2A1-209ENST00000565042 PTMAP06454 111 aaKnown RBP7.41□□□□□ -1.22
ATP2A1-209ENST00000565042 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms