RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	ATP5E	P56381	51 aa	Predicted RBP	4.82	□□□□□ -1.64
SIN3A-205	ENST00000564778	TMEM258	P61165	79 aa		4.82	□□□□□ -1.64
SIN3A-205	ENST00000564778	ACYP2	P14621	99 aa		4.81	□□□□□ -1.64
SIN3A-205	ENST00000564778		S4R3F8	94 aa		4.81	□□□□□ -1.64
SIN3A-205	ENST00000564778	LCA10	Q71F78	164 aa		4.78	□□□□□ -1.64
SIN3A-205	ENST00000564778		M0R2T5	61 aa		4.77	□□□□□ -1.65
SIN3A-205	ENST00000564778	KRTAP3-3	Q9BYR6	98 aa		4.76	□□□□□ -1.65
SIN3A-205	ENST00000564778	COA5	Q86WW8	74 aa		4.74	□□□□□ -1.65
SIN3A-205	ENST00000564778	LCE2D	Q5TA82	110 aa	Predicted RBP	4.72	□□□□□ -1.65
SIN3A-205	ENST00000564778	CSAG1	Q6PB30	78 aa		4.72	□□□□□ -1.65
SIN3A-205	ENST00000564778	CHKB-CPT1B	H3BT56	60 aa		4.71	□□□□□ -1.66
SIN3A-205	ENST00000564778	KRTAP10-6	P60371	365 aa	Predicted RBP	4.71	□□□□□ -1.66
SIN3A-205	ENST00000564778	LOR	P23490	312 aa	Predicted RBP	4.7	□□□□□ -1.66
SIN3A-205	ENST00000564778	SPTSSB	Q8NFR3	76 aa		4.68	□□□□□ -1.66
SIN3A-205	ENST00000564778	FSIP2	Q5CZC0	6907 aa		4.67	□□□□□ -1.66
SIN3A-205	ENST00000564778	SERP1	Q9Y6X1	66 aa		4.66	□□□□□ -1.66
SIN3A-205	ENST00000564778		H0YAA0	97 aa		4.64	□□□□□ -1.67
SIN3A-205	ENST00000564778	CRCT1	Q9UGL9	99 aa		4.64	□□□□□ -1.67
SIN3A-205	ENST00000564778	KRTAP9-8	Q9BYQ0	159 aa		4.63	□□□□□ -1.67
SIN3A-205	ENST00000564778	MT2A	P02795	61 aa		4.61	□□□□□ -1.67
SIN3A-205	ENST00000564778	MT1F	P04733	61 aa		4.57	□□□□□ -1.68
SIN3A-205	ENST00000564778	RPS28	P62857	69 aa	Known RBP	4.57	□□□□□ -1.68
SIN3A-205	ENST00000564778	ADM2	Q7Z4H4	148 aa		4.56	□□□□□ -1.68
SIN3A-205	ENST00000564778	KRTAP3-2	Q9BYR7	98 aa		4.56	□□□□□ -1.68
SIN3A-205	ENST00000564778	KRTAP10-10	P60014	251 aa		4.52	□□□□□ -1.69
SIN3A-205	ENST00000564778		P0C880	135 aa		4.51	□□□□□ -1.69
SIN3A-205	ENST00000564778	LINC01558	Q9Y6Z2	57 aa		4.51	□□□□□ -1.69
SIN3A-205	ENST00000564778	SMIM26	A0A096LP01	95 aa		4.5	□□□□□ -1.69
SIN3A-205	ENST00000564778	CRIPT	Q9P021	101 aa		4.5	□□□□□ -1.69
SIN3A-205	ENST00000564778	SEC61G	P60059	68 aa		4.49	□□□□□ -1.69
SIN3A-205	ENST00000564778	KRTAP9-3	Q9BYQ3	159 aa		4.49	□□□□□ -1.69
SIN3A-205	ENST00000564778		A0A1B0GU69	56 aa		4.47	□□□□□ -1.69
SIN3A-205	ENST00000564778		Q1T7F1	81 aa		4.47	□□□□□ -1.69
SIN3A-205	ENST00000564778		V9GYY9	64 aa		4.47	□□□□□ -1.69
SIN3A-205	ENST00000564778	PRR15L	Q9BU68	103 aa		4.45	□□□□□ -1.7
SIN3A-205	ENST00000564778	SPRR2G	Q9BYE4	73 aa		4.45	□□□□□ -1.7
SIN3A-205	ENST00000564778	KRTAP19-1	Q8IUB9	90 aa		4.44	□□□□□ -1.7
SIN3A-205	ENST00000564778	USH2A	O75445	5202 aa		4.41	□□□□□ -1.7
SIN3A-205	ENST00000564778		M0QZ58	72 aa		4.41	□□□□□ -1.7
SIN3A-205	ENST00000564778		R4GN34	69 aa		4.41	□□□□□ -1.7
SIN3A-205	ENST00000564778		A0A1B0GU33	70 aa		4.39	□□□□□ -1.71
SIN3A-205	ENST00000564778	KRTAP13-4	Q3LI77	160 aa		4.38	□□□□□ -1.71
SIN3A-205	ENST00000564778	LCE2B	O14633	110 aa		4.37	□□□□□ -1.71
SIN3A-205	ENST00000564778		Q5VV11	94 aa		4.37	□□□□□ -1.71
SIN3A-205	ENST00000564778	KRTAP9-7	A8MTY7	169 aa		4.36	□□□□□ -1.71
SIN3A-205	ENST00000564778	PSPHP1	O15172	72 aa		4.36	□□□□□ -1.71
SIN3A-205	ENST00000564778	KRTAP19-8	Q3LI54	63 aa		4.36	□□□□□ -1.71
SIN3A-205	ENST00000564778	SSPO	A2VEC9	5147 aa		4.36	□□□□□ -1.71
SIN3A-205	ENST00000564778	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.34	□□□□□ -1.71
SIN3A-205	ENST00000564778	UQCR11	O14957	56 aa		4.31	□□□□□ -1.72
SIN3A-205	ENST00000564778	SPATA8	Q6RVD6	105 aa		4.31	□□□□□ -1.72
SIN3A-205	ENST00000564778		A6NN06	94 aa		4.3	□□□□□ -1.72
SIN3A-205	ENST00000564778	MT1B	P07438	61 aa		4.3	□□□□□ -1.72
SIN3A-205	ENST00000564778	SVIP	Q8NHG7	77 aa		4.29	□□□□□ -1.72
SIN3A-205	ENST00000564778	LINC01554	Q52M75	96 aa		4.28	□□□□□ -1.72
SIN3A-205	ENST00000564778	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.27	□□□□□ -1.73
SIN3A-205	ENST00000564778		A0A0D9SG42	100 aa		4.24	□□□□□ -1.73
SIN3A-205	ENST00000564778		A6NED7	52 aa		4.24	□□□□□ -1.73
SIN3A-205	ENST00000564778	MIR22HG	Q0VDD5	57 aa		4.24	□□□□□ -1.73
SIN3A-205	ENST00000564778		A8MU10	97 aa		4.23	□□□□□ -1.73
SIN3A-205	ENST00000564778	KRTAP19-6	Q3LI70	58 aa		4.23	□□□□□ -1.73
SIN3A-205	ENST00000564778	PLAC4	Q8WY50	150 aa		4.21	□□□□□ -1.74
SIN3A-205	ENST00000564778	KRTAP12-1	P59990	96 aa		4.2	□□□□□ -1.74
SIN3A-205	ENST00000564778	KRTAP12-2	P59991	146 aa		4.17	□□□□□ -1.74
SIN3A-205	ENST00000564778	CDC42SE1	Q9NRR8	79 aa		4.17	□□□□□ -1.74
SIN3A-205	ENST00000564778	SPINT4	Q6UDR6	99 aa		4.15	□□□□□ -1.75
SIN3A-205	ENST00000564778	MACF1	Q9UPN3	7388 aa	Known RBP	4.14	□□□□□ -1.75
SIN3A-205	ENST00000564778	MT1X	P80297	61 aa		4.13	□□□□□ -1.75
SIN3A-205	ENST00000564778	KRTAP10-5	P60370	271 aa		4.12	□□□□□ -1.75
SIN3A-205	ENST00000564778	SYNE2	Q8WXH0	6885 aa	Known RBP	4.1	□□□□□ -1.75
SIN3A-205	ENST00000564778	CAMK2N1	Q7Z7J9	78 aa		4.1	□□□□□ -1.75
SIN3A-205	ENST00000564778	PRO2289	Q9P1D8	64 aa		4.09	□□□□□ -1.75
SIN3A-205	ENST00000564778		K7ERS5	55 aa		4.08	□□□□□ -1.76
SIN3A-205	ENST00000564778	BRK1	Q8WUW1	75 aa		4.05	□□□□□ -1.76
SIN3A-205	ENST00000564778	KRTAP6-3	Q3LI67	103 aa		4	□□□□□ -1.77
SIN3A-205	ENST00000564778	C10orf95	Q9H7T3	257 aa		3.98	□□□□□ -1.77
SIN3A-205	ENST00000564778	KRTAP10-7	P60409	375 aa	Predicted RBP	3.93	□□□□□ -1.78
SIN3A-205	ENST00000564778	MUC12	Q9UKN1	5478 aa		3.93	□□□□□ -1.78
SIN3A-205	ENST00000564778	KMT2D	O14686	5537 aa		3.92	□□□□□ -1.78
SIN3A-205	ENST00000564778	KRTAP10-12	P60413	245 aa		3.92	□□□□□ -1.78
SIN3A-205	ENST00000564778	ROMO1	P60602	79 aa		3.9	□□□□□ -1.79
SIN3A-205	ENST00000564778	PRO0628	Q9UI54	55 aa		3.9	□□□□□ -1.79
SIN3A-205	ENST00000564778	TNP1	P09430	55 aa		3.89	□□□□□ -1.79
SIN3A-205	ENST00000564778	KRTAP25-1	Q3LHN0	102 aa		3.87	□□□□□ -1.79
SIN3A-205	ENST00000564778	NEB	P20929	6669 aa		3.84	□□□□□ -1.8
SIN3A-205	ENST00000564778	KRTAP5-9	P26371	169 aa		3.83	□□□□□ -1.8
SIN3A-205	ENST00000564778	PMAIP1	Q13794	54 aa		3.82	□□□□□ -1.8
SIN3A-205	ENST00000564778	KRTAP4-8	A0A0G2JLE6	195 aa		3.8	□□□□□ -1.8
SIN3A-205	ENST00000564778	KRTAP4-8	Q9BYQ9	185 aa		3.8	□□□□□ -1.8
SIN3A-205	ENST00000564778	KRTAP20-1	Q3LI63	56 aa		3.78	□□□□□ -1.8
SIN3A-205	ENST00000564778	MDN1	Q9NU22	5596 aa		3.77	□□□□□ -1.81
SIN3A-205	ENST00000564778	KRTAP23-1	A1A580	65 aa		3.76	□□□□□ -1.81
SIN3A-205	ENST00000564778	LCE3A	Q5TA76	89 aa		3.76	□□□□□ -1.81
SIN3A-205	ENST00000564778	KRTAP8-1	Q8IUC2	63 aa		3.76	□□□□□ -1.81
SIN3A-205	ENST00000564778	SPRR2F	Q96RM1	72 aa		3.74	□□□□□ -1.81
SIN3A-205	ENST00000564778	PP632	Q6XCG6	107 aa		3.7	□□□□□ -1.82
SIN3A-205	ENST00000564778	KRTAP19-7	Q3SYF9	63 aa		3.69	□□□□□ -1.82
SIN3A-205	ENST00000564778	SPRR2E	P22531	72 aa		3.67	□□□□□ -1.82
SIN3A-205	ENST00000564778	SPRR2B	P35325	72 aa		3.67	□□□□□ -1.82
SIN3A-205	ENST00000564778	SPRR2A	P35326	72 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms