RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
HERC2-207ENST00000564734 MYCBP2O75592 4640 aa8.1□□□□□ -1.11
HERC2-207ENST00000564734 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.12
HERC2-207ENST00000564734 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
HERC2-207ENST00000564734 TNXBP22105 4242 aa8.08□□□□□ -1.12
HERC2-207ENST00000564734 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
HERC2-207ENST00000564734 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
HERC2-207ENST00000564734 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
HERC2-207ENST00000564734 HERC2O95714 4834 aa8□□□□□ -1.13
HERC2-207ENST00000564734 H0YAA0 97 aa7.98□□□□□ -1.13
HERC2-207ENST00000564734 LINC01554Q52M75 96 aa7.95□□□□□ -1.14
HERC2-207ENST00000564734 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
HERC2-207ENST00000564734 A0A1B0GU33 70 aa7.92□□□□□ -1.14
HERC2-207ENST00000564734 H1FX-AS1Q4G0G2 97 aa7.92□□□□□ -1.14
HERC2-207ENST00000564734 RPL37P61927 97 aaKnown RBP7.92□□□□□ -1.14
HERC2-207ENST00000564734 XP32Q5T750 250 aa7.88□□□□□ -1.15
HERC2-207ENST00000564734 PCLOQ9Y6V0 5065 aa7.86□□□□□ -1.15
HERC2-207ENST00000564734 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
HERC2-207ENST00000564734 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
HERC2-207ENST00000564734 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
HERC2-207ENST00000564734 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
HERC2-207ENST00000564734 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
HERC2-207ENST00000564734 S4R3F8 94 aa7.71□□□□□ -1.18
HERC2-207ENST00000564734 HERC1Q15751 4861 aa7.7□□□□□ -1.18
HERC2-207ENST00000564734 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
HERC2-207ENST00000564734 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
HERC2-207ENST00000564734 K7ERS5 55 aa7.6□□□□□ -1.19
HERC2-207ENST00000564734 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
HERC2-207ENST00000564734 LPAP08519 4548 aa7.58□□□□□ -1.2
HERC2-207ENST00000564734 P0C880 135 aa7.58□□□□□ -1.2
HERC2-207ENST00000564734 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
HERC2-207ENST00000564734 LRP2P98164 4655 aa7.52□□□□□ -1.21
HERC2-207ENST00000564734 A0A0D9SG42 100 aa7.51□□□□□ -1.21
HERC2-207ENST00000564734 ROMO1P60602 79 aa7.48□□□□□ -1.21
HERC2-207ENST00000564734 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
HERC2-207ENST00000564734 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
HERC2-207ENST00000564734 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
HERC2-207ENST00000564734 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
HERC2-207ENST00000564734 M0QZ58 72 aa7.34□□□□□ -1.24
HERC2-207ENST00000564734 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
HERC2-207ENST00000564734 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
HERC2-207ENST00000564734 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.24
HERC2-207ENST00000564734 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
HERC2-207ENST00000564734 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
HERC2-207ENST00000564734 MUC2Q02817 5179 aa7.22□□□□□ -1.25
HERC2-207ENST00000564734 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
HERC2-207ENST00000564734 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
HERC2-207ENST00000564734 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
HERC2-207ENST00000564734 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
HERC2-207ENST00000564734 R4GN34 69 aa7.12□□□□□ -1.27
HERC2-207ENST00000564734 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
HERC2-207ENST00000564734 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
HERC2-207ENST00000564734 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
HERC2-207ENST00000564734 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
HERC2-207ENST00000564734 M0R2T5 61 aa6.81□□□□□ -1.32
HERC2-207ENST00000564734 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
HERC2-207ENST00000564734 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
HERC2-207ENST00000564734 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
HERC2-207ENST00000564734 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
HERC2-207ENST00000564734 MT1HP80294 61 aa6.62□□□□□ -1.35
HERC2-207ENST00000564734 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
HERC2-207ENST00000564734 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
HERC2-207ENST00000564734 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
HERC2-207ENST00000564734 TNP1P09430 55 aa6.51□□□□□ -1.37
HERC2-207ENST00000564734 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
HERC2-207ENST00000564734 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
HERC2-207ENST00000564734 MT2AP02795 61 aa6.41□□□□□ -1.38
HERC2-207ENST00000564734 LCE2BO14633 110 aa6.4□□□□□ -1.38
HERC2-207ENST00000564734 MT1FP04733 61 aa6.4□□□□□ -1.38
HERC2-207ENST00000564734 KRTAP10-10P60014 251 aa6.4□□□□□ -1.38
HERC2-207ENST00000564734 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
HERC2-207ENST00000564734 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
HERC2-207ENST00000564734 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
HERC2-207ENST00000564734 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
HERC2-207ENST00000564734 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
HERC2-207ENST00000564734 MT1BP07438 61 aa6.21□□□□□ -1.42
HERC2-207ENST00000564734 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
HERC2-207ENST00000564734 MT1XP80297 61 aa6.14□□□□□ -1.43
HERC2-207ENST00000564734 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
HERC2-207ENST00000564734 USH2AO75445 5202 aa6.1□□□□□ -1.43
HERC2-207ENST00000564734 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
HERC2-207ENST00000564734 KRTAP10-12P60413 245 aa5.96□□□□□ -1.45
HERC2-207ENST00000564734 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
HERC2-207ENST00000564734 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
HERC2-207ENST00000564734 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
HERC2-207ENST00000564734 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
HERC2-207ENST00000564734 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
HERC2-207ENST00000564734 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
HERC2-207ENST00000564734 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
HERC2-207ENST00000564734 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
HERC2-207ENST00000564734 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
HERC2-207ENST00000564734 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
HERC2-207ENST00000564734 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
HERC2-207ENST00000564734 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
HERC2-207ENST00000564734 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
HERC2-207ENST00000564734 KMT2DO14686 5537 aa5.53□□□□□ -1.52
HERC2-207ENST00000564734 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
HERC2-207ENST00000564734 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
HERC2-207ENST00000564734 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
HERC2-207ENST00000564734 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms