RNA–Protein interactions for RNA: ENST00000564630.5

CCNDBP1-205, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 2,079 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-205ENST00000564630 LINC01554Q52M75 96 aa11.23□□□□□ -0.61
CCNDBP1-205ENST00000564630 J3QL48 77 aa11.15□□□□□ -0.62
CCNDBP1-205ENST00000564630 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.63
CCNDBP1-205ENST00000564630 MT1HL1P0DM35 61 aa11.08□□□□□ -0.64
CCNDBP1-205ENST00000564630 HERC1Q15751 4861 aa11.07□□□□□ -0.64
CCNDBP1-205ENST00000564630 TNXBP22105 4242 aa11.05□□□□□ -0.64
CCNDBP1-205ENST00000564630 C9orf92A6NGG3 77 aa11□□□□□ -0.65
CCNDBP1-205ENST00000564630 CSAG1Q6PB30 78 aa11□□□□□ -0.65
CCNDBP1-205ENST00000564630 A8MUU9 505 aa10.99□□□□□ -0.65
CCNDBP1-205ENST00000564630 C20orf166-AS1Q96NR2 134 aa10.99□□□□□ -0.65
CCNDBP1-205ENST00000564630 KRTAP10-8P60410 259 aa10.99□□□□□ -0.65
CCNDBP1-205ENST00000564630 H0YAA0 97 aa10.91□□□□□ -0.66
CCNDBP1-205ENST00000564630 A0A1B0GU33 70 aa10.8□□□□□ -0.68
CCNDBP1-205ENST00000564630 KRTAP3-1Q9BYR8 98 aa10.79□□□□□ -0.68
CCNDBP1-205ENST00000564630 H1FX-AS1Q4G0G2 97 aa10.78□□□□□ -0.68
CCNDBP1-205ENST00000564630 KRTAP25-1Q3LHN0 102 aa10.77□□□□□ -0.69
CCNDBP1-205ENST00000564630 HMCN2Q8NDA2 5059 aa10.73□□□□□ -0.69
CCNDBP1-205ENST00000564630 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
CCNDBP1-205ENST00000564630 H3BS24 57 aa10.58□□□□□ -0.72
CCNDBP1-205ENST00000564630 K7ERS5 55 aa10.57□□□□□ -0.72
CCNDBP1-205ENST00000564630 ROMO1P60602 79 aa10.54□□□□□ -0.72
CCNDBP1-205ENST00000564630 LPAP08519 4548 aa10.53□□□□□ -0.72
CCNDBP1-205ENST00000564630 LRP2P98164 4655 aa10.53□□□□□ -0.72
CCNDBP1-205ENST00000564630 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
CCNDBP1-205ENST00000564630 XP32Q5T750 250 aa10.44□□□□□ -0.74
CCNDBP1-205ENST00000564630 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
CCNDBP1-205ENST00000564630 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
CCNDBP1-205ENST00000564630 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
CCNDBP1-205ENST00000564630 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
CCNDBP1-205ENST00000564630 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.76
CCNDBP1-205ENST00000564630 S4R3F8 94 aa10.26□□□□□ -0.77
CCNDBP1-205ENST00000564630 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
CCNDBP1-205ENST00000564630 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
CCNDBP1-205ENST00000564630 P0C880 135 aa10.19□□□□□ -0.78
CCNDBP1-205ENST00000564630 RNF213Q63HN8 5207 aa10.17□□□□□ -0.78
CCNDBP1-205ENST00000564630 MUC17Q685J3 4493 aa10.06□□□□□ -0.8
CCNDBP1-205ENST00000564630 A0A0D9SG42 100 aa10.04□□□□□ -0.8
CCNDBP1-205ENST00000564630 MUC2Q02817 5179 aa10.03□□□□□ -0.8
CCNDBP1-205ENST00000564630 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
CCNDBP1-205ENST00000564630 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
CCNDBP1-205ENST00000564630 KRTAP15-1Q3LI76 137 aa9.94□□□□□ -0.82
CCNDBP1-205ENST00000564630 KRTAP12-2P59991 146 aa9.92□□□□□ -0.82
CCNDBP1-205ENST00000564630 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
CCNDBP1-205ENST00000564630 KRTAP4-1Q9BYQ7 146 aa9.9□□□□□ -0.82
CCNDBP1-205ENST00000564630 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
CCNDBP1-205ENST00000564630 M0QZ58 72 aa9.84□□□□□ -0.83
CCNDBP1-205ENST00000564630 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.85
CCNDBP1-205ENST00000564630 NDUFAF8A1L188 74 aa9.65□□□□□ -0.86
CCNDBP1-205ENST00000564630 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
CCNDBP1-205ENST00000564630 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
CCNDBP1-205ENST00000564630 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
CCNDBP1-205ENST00000564630 R4GN34 69 aa9.49□□□□□ -0.89
CCNDBP1-205ENST00000564630 MT1HP80294 61 aa9.4□□□□□ -0.91
CCNDBP1-205ENST00000564630 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
CCNDBP1-205ENST00000564630 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
CCNDBP1-205ENST00000564630 PLAC4Q8WY50 150 aa9.27□□□□□ -0.93
CCNDBP1-205ENST00000564630 M0R2T5 61 aa9.26□□□□□ -0.93
CCNDBP1-205ENST00000564630 PP632Q6XCG6 107 aa9.2□□□□□ -0.94
CCNDBP1-205ENST00000564630 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
CCNDBP1-205ENST00000564630 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
CCNDBP1-205ENST00000564630 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
CCNDBP1-205ENST00000564630 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
CCNDBP1-205ENST00000564630 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
CCNDBP1-205ENST00000564630 MT2AP02795 61 aa8.85□□□□□ -0.99
CCNDBP1-205ENST00000564630 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
CCNDBP1-205ENST00000564630 A0A0A0MQY5 61 aa8.81□□□□□ -1
CCNDBP1-205ENST00000564630 MT1FP04733 61 aa8.81□□□□□ -1
CCNDBP1-205ENST00000564630 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1.01
CCNDBP1-205ENST00000564630 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
CCNDBP1-205ENST00000564630 TNP1P09430 55 aa8.71□□□□□ -1.01
CCNDBP1-205ENST00000564630 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
CCNDBP1-205ENST00000564630 FSIP2Q5CZC0 6907 aa8.67□□□□□ -1.02
CCNDBP1-205ENST00000564630 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
CCNDBP1-205ENST00000564630 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
CCNDBP1-205ENST00000564630 LCE2BO14633 110 aa8.55□□□□□ -1.04
CCNDBP1-205ENST00000564630 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
CCNDBP1-205ENST00000564630 CRCT1Q9UGL9 99 aa8.52□□□□□ -1.05
CCNDBP1-205ENST00000564630 USH2AO75445 5202 aa8.52□□□□□ -1.05
CCNDBP1-205ENST00000564630 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
CCNDBP1-205ENST00000564630 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
CCNDBP1-205ENST00000564630 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
CCNDBP1-205ENST00000564630 MT1BP07438 61 aa8.18□□□□□ -1.1
CCNDBP1-205ENST00000564630 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
CCNDBP1-205ENST00000564630 FCGBPQ9Y6R7 5405 aaPredicted RBP8.13□□□□□ -1.11
CCNDBP1-205ENST00000564630 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
CCNDBP1-205ENST00000564630 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
CCNDBP1-205ENST00000564630 MT1XP80297 61 aa8.1□□□□□ -1.11
CCNDBP1-205ENST00000564630 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
CCNDBP1-205ENST00000564630 INE1O15225 51 aa7.99□□□□□ -1.13
CCNDBP1-205ENST00000564630 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
CCNDBP1-205ENST00000564630 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
CCNDBP1-205ENST00000564630 KRTAP10-7P60409 375 aaPredicted RBP7.87□□□□□ -1.15
CCNDBP1-205ENST00000564630 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
CCNDBP1-205ENST00000564630 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
CCNDBP1-205ENST00000564630 KRTAP9-7A8MTY7 169 aa7.73□□□□□ -1.17
CCNDBP1-205ENST00000564630 SYNE2Q8WXH0 6885 aaKnown RBP7.69□□□□□ -1.18
CCNDBP1-205ENST00000564630 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
CCNDBP1-205ENST00000564630 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
CCNDBP1-205ENST00000564630 KMT2DO14686 5537 aa7.48□□□□□ -1.21
CCNDBP1-205ENST00000564630 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms