RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
SF3B3-204ENST00000563739 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
SF3B3-204ENST00000563739 C8orf87E5RJ46 101 aa4.97□□□□□ -1.61
SF3B3-204ENST00000563739 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
SF3B3-204ENST00000563739 PRR15Q8IV56 129 aa4.97□□□□□ -1.61
SF3B3-204ENST00000563739 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
SF3B3-204ENST00000563739 OCR1Q9BZK8 76 aa4.96□□□□□ -1.62
SF3B3-204ENST00000563739 NDUFB1O75438 58 aa4.95□□□□□ -1.62
SF3B3-204ENST00000563739 Q8N9P0 234 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-204ENST00000563739 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SF3B3-204ENST00000563739 WFDC13Q8IUB5 93 aa4.92□□□□□ -1.62
SF3B3-204ENST00000563739 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
SF3B3-204ENST00000563739 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
SF3B3-204ENST00000563739 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
SF3B3-204ENST00000563739 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
SF3B3-204ENST00000563739 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
SF3B3-204ENST00000563739 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.63
SF3B3-204ENST00000563739 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
SF3B3-204ENST00000563739 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
SF3B3-204ENST00000563739 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
SF3B3-204ENST00000563739 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
SF3B3-204ENST00000563739 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
SF3B3-204ENST00000563739 C5orf47Q569G3 176 aa4.87□□□□□ -1.63
SF3B3-204ENST00000563739 SNURFQ9Y675 71 aa4.86□□□□□ -1.63
SF3B3-204ENST00000563739 NDUFC1O43677 76 aa4.85□□□□□ -1.63
SF3B3-204ENST00000563739 TMEM258P61165 79 aa4.85□□□□□ -1.63
SF3B3-204ENST00000563739 ZCCHC13Q8WW36 166 aaKnown RBP4.84□□□□□ -1.63
SF3B3-204ENST00000563739 MRPL34Q9BQ48 92 aaKnown RBP4.84□□□□□ -1.63
SF3B3-204ENST00000563739 H7BZZ5 65 aa4.83□□□□□ -1.64
SF3B3-204ENST00000563739 MT1BP07438 61 aa4.83□□□□□ -1.64
SF3B3-204ENST00000563739 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
SF3B3-204ENST00000563739 MP68P56378 58 aa4.82□□□□□ -1.64
SF3B3-204ENST00000563739 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SF3B3-204ENST00000563739 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
SF3B3-204ENST00000563739 H3BPC8 53 aa4.81□□□□□ -1.64
SF3B3-204ENST00000563739 H0Y9P7 68 aa4.8□□□□□ -1.64
SF3B3-204ENST00000563739 NDUFS5O43920 106 aa4.79□□□□□ -1.64
SF3B3-204ENST00000563739 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
SF3B3-204ENST00000563739 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
SF3B3-204ENST00000563739 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
SF3B3-204ENST00000563739 SPINK7P58062 85 aa4.77□□□□□ -1.65
SF3B3-204ENST00000563739 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
SF3B3-204ENST00000563739 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-204ENST00000563739 A6NN06 94 aa4.75□□□□□ -1.65
SF3B3-204ENST00000563739 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
SF3B3-204ENST00000563739 C1orf64Q8NEQ6 169 aa4.75□□□□□ -1.65
SF3B3-204ENST00000563739 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
SF3B3-204ENST00000563739 Q5W150 140 aa4.73□□□□□ -1.65
SF3B3-204ENST00000563739 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
SF3B3-204ENST00000563739 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
SF3B3-204ENST00000563739 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
SF3B3-204ENST00000563739 CYP4F30PQ9H0H9 118 aa4.68□□□□□ -1.66
SF3B3-204ENST00000563739 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
SF3B3-204ENST00000563739 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
SF3B3-204ENST00000563739 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
SF3B3-204ENST00000563739 Q5VV11 94 aa4.62□□□□□ -1.67
SF3B3-204ENST00000563739 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
SF3B3-204ENST00000563739 SPRR2EP22531 72 aa4.58□□□□□ -1.68
SF3B3-204ENST00000563739 SPRR2BP35325 72 aa4.58□□□□□ -1.68
SF3B3-204ENST00000563739 SPRR2AP35326 72 aa4.58□□□□□ -1.68
SF3B3-204ENST00000563739 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
SF3B3-204ENST00000563739 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SF3B3-204ENST00000563739 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
SF3B3-204ENST00000563739 COA5Q86WW8 74 aa4.54□□□□□ -1.68
SF3B3-204ENST00000563739 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
SF3B3-204ENST00000563739 ACYP2P14621 99 aa4.52□□□□□ -1.69
SF3B3-204ENST00000563739 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
SF3B3-204ENST00000563739 Q1T7F1 81 aa4.49□□□□□ -1.69
SF3B3-204ENST00000563739 S4R3F8 94 aa4.47□□□□□ -1.69
SF3B3-204ENST00000563739 A8MUN3 132 aa4.46□□□□□ -1.7
SF3B3-204ENST00000563739 V9GYY9 64 aa4.46□□□□□ -1.7
SF3B3-204ENST00000563739 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
SF3B3-204ENST00000563739 LCA10Q71F78 164 aa4.43□□□□□ -1.7
SF3B3-204ENST00000563739 SPRR2DP22532 72 aa4.42□□□□□ -1.7
SF3B3-204ENST00000563739 MT1XP80297 61 aa4.41□□□□□ -1.7
SF3B3-204ENST00000563739 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
SF3B3-204ENST00000563739 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
SF3B3-204ENST00000563739 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
SF3B3-204ENST00000563739 PSPHP1O15172 72 aa4.38□□□□□ -1.71
SF3B3-204ENST00000563739 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
SF3B3-204ENST00000563739 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
SF3B3-204ENST00000563739 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
SF3B3-204ENST00000563739 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
SF3B3-204ENST00000563739 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
SF3B3-204ENST00000563739 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SF3B3-204ENST00000563739 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
SF3B3-204ENST00000563739 A0A1B0GU69 56 aa4.29□□□□□ -1.72
SF3B3-204ENST00000563739 H0YAA0 97 aa4.26□□□□□ -1.73
SF3B3-204ENST00000563739 BRK1Q8WUW1 75 aa4.26□□□□□ -1.73
SF3B3-204ENST00000563739 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
SF3B3-204ENST00000563739 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
SF3B3-204ENST00000563739 A6NED7 52 aa4.24□□□□□ -1.73
SF3B3-204ENST00000563739 SEC61GP60059 68 aa4.24□□□□□ -1.73
SF3B3-204ENST00000563739 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
SF3B3-204ENST00000563739 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms