RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
SCAMP2-203ENST00000563663 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
SCAMP2-203ENST00000563663 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
SCAMP2-203ENST00000563663 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
SCAMP2-203ENST00000563663 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
SCAMP2-203ENST00000563663 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
SCAMP2-203ENST00000563663 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
SCAMP2-203ENST00000563663 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
SCAMP2-203ENST00000563663 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
SCAMP2-203ENST00000563663 A6NED7 52 aa7.64□□□□□ -1.19
SCAMP2-203ENST00000563663 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
SCAMP2-203ENST00000563663 LCA10Q71F78 164 aa7.61□□□□□ -1.19
SCAMP2-203ENST00000563663 A0A1B0GU69 56 aa7.56□□□□□ -1.2
SCAMP2-203ENST00000563663 SPINK7P58062 85 aa7.54□□□□□ -1.2
SCAMP2-203ENST00000563663 MT1HP80294 61 aa7.54□□□□□ -1.2
SCAMP2-203ENST00000563663 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
SCAMP2-203ENST00000563663 A8MU10 97 aa7.53□□□□□ -1.2
SCAMP2-203ENST00000563663 PMAIP1Q13794 54 aa7.48□□□□□ -1.21
SCAMP2-203ENST00000563663 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.21
SCAMP2-203ENST00000563663 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
SCAMP2-203ENST00000563663 UQCR11O14957 56 aa7.43□□□□□ -1.22
SCAMP2-203ENST00000563663 COX6B2Q6YFQ2 88 aa7.43□□□□□ -1.22
SCAMP2-203ENST00000563663 SEC61GP60059 68 aa7.41□□□□□ -1.22
SCAMP2-203ENST00000563663 A6NN06 94 aa7.4□□□□□ -1.23
SCAMP2-203ENST00000563663 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
SCAMP2-203ENST00000563663 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
SCAMP2-203ENST00000563663 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
SCAMP2-203ENST00000563663 KTN1-AS1Q86SY8 53 aa7.31□□□□□ -1.24
SCAMP2-203ENST00000563663 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
SCAMP2-203ENST00000563663 M0R2T5 61 aa7.25□□□□□ -1.25
SCAMP2-203ENST00000563663 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
SCAMP2-203ENST00000563663 A0A1B0GU33 70 aa7.21□□□□□ -1.25
SCAMP2-203ENST00000563663 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
SCAMP2-203ENST00000563663 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
SCAMP2-203ENST00000563663 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
SCAMP2-203ENST00000563663 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
SCAMP2-203ENST00000563663 H0YAA0 97 aa7.15□□□□□ -1.27
SCAMP2-203ENST00000563663 S4R3F8 94 aa7.13□□□□□ -1.27
SCAMP2-203ENST00000563663 MT2AP02795 61 aa7.1□□□□□ -1.27
SCAMP2-203ENST00000563663 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
SCAMP2-203ENST00000563663 MT1FP04733 61 aa7.06□□□□□ -1.28
SCAMP2-203ENST00000563663 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
SCAMP2-203ENST00000563663 USH2AO75445 5202 aa6.99□□□□□ -1.29
SCAMP2-203ENST00000563663 K7ERS5 55 aa6.97□□□□□ -1.29
SCAMP2-203ENST00000563663 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
SCAMP2-203ENST00000563663 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
SCAMP2-203ENST00000563663 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
SCAMP2-203ENST00000563663 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.3
SCAMP2-203ENST00000563663 PRAC1Q96KF2 57 aa6.9□□□□□ -1.31
SCAMP2-203ENST00000563663 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
SCAMP2-203ENST00000563663 LCE2BO14633 110 aa6.89□□□□□ -1.31
SCAMP2-203ENST00000563663 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
SCAMP2-203ENST00000563663 P0C880 135 aa6.88□□□□□ -1.31
SCAMP2-203ENST00000563663 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
SCAMP2-203ENST00000563663 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
SCAMP2-203ENST00000563663 M0QZ58 72 aa6.83□□□□□ -1.32
SCAMP2-203ENST00000563663 A0A0D9SG42 100 aa6.75□□□□□ -1.33
SCAMP2-203ENST00000563663 ROMO1P60602 79 aa6.74□□□□□ -1.33
SCAMP2-203ENST00000563663 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
SCAMP2-203ENST00000563663 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
SCAMP2-203ENST00000563663 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
SCAMP2-203ENST00000563663 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
SCAMP2-203ENST00000563663 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
SCAMP2-203ENST00000563663 KRTAP12-2P59991 146 aa6.65□□□□□ -1.34
SCAMP2-203ENST00000563663 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
SCAMP2-203ENST00000563663 R4GN34 69 aa6.6□□□□□ -1.35
SCAMP2-203ENST00000563663 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
SCAMP2-203ENST00000563663 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
SCAMP2-203ENST00000563663 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SCAMP2-203ENST00000563663 MT1BP07438 61 aa6.57□□□□□ -1.36
SCAMP2-203ENST00000563663 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
SCAMP2-203ENST00000563663 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
SCAMP2-203ENST00000563663 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.39
SCAMP2-203ENST00000563663 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
SCAMP2-203ENST00000563663 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
SCAMP2-203ENST00000563663 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
SCAMP2-203ENST00000563663 H3BS24 57 aa6.23□□□□□ -1.41
SCAMP2-203ENST00000563663 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
SCAMP2-203ENST00000563663 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
SCAMP2-203ENST00000563663 MT1XP80297 61 aa6.21□□□□□ -1.41
SCAMP2-203ENST00000563663 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
SCAMP2-203ENST00000563663 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
SCAMP2-203ENST00000563663 KMT2DO14686 5537 aa6.09□□□□□ -1.43
SCAMP2-203ENST00000563663 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
SCAMP2-203ENST00000563663 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
SCAMP2-203ENST00000563663 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
SCAMP2-203ENST00000563663 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
SCAMP2-203ENST00000563663 TNP1P09430 55 aa6.03□□□□□ -1.44
SCAMP2-203ENST00000563663 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
SCAMP2-203ENST00000563663 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
SCAMP2-203ENST00000563663 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
SCAMP2-203ENST00000563663 NEBP20929 6669 aa5.89□□□□□ -1.47
SCAMP2-203ENST00000563663 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
SCAMP2-203ENST00000563663 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
SCAMP2-203ENST00000563663 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
SCAMP2-203ENST00000563663 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
SCAMP2-203ENST00000563663 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
SCAMP2-203ENST00000563663 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
SCAMP2-203ENST00000563663 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
SCAMP2-203ENST00000563663 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms