RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
SMPD3-202ENST00000561749 TRAV7A0A075B6U4 112 aa10.84□□□□□ -0.67
SMPD3-202ENST00000561749 USH2AO75445 5202 aa10.83□□□□□ -0.68
SMPD3-202ENST00000561749 A8MUN3 132 aa10.83□□□□□ -0.68
SMPD3-202ENST00000561749 SMIM20Q8N5G0 67 aa10.83□□□□□ -0.68
SMPD3-202ENST00000561749 NDUFC1O43677 76 aa10.76□□□□□ -0.69
SMPD3-202ENST00000561749 DMAC1Q96GE9 116 aa10.69□□□□□ -0.7
SMPD3-202ENST00000561749 SSPOA2VEC9 5147 aa10.67□□□□□ -0.7
SMPD3-202ENST00000561749 SNURFQ9Y675 71 aa10.65□□□□□ -0.7
SMPD3-202ENST00000561749 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
SMPD3-202ENST00000561749 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
SMPD3-202ENST00000561749 C20orf197Q8N268 126 aa10.57□□□□□ -0.72
SMPD3-202ENST00000561749 H0YAA0 97 aa10.52□□□□□ -0.73
SMPD3-202ENST00000561749 ADM2Q7Z4H4 148 aa10.51□□□□□ -0.73
SMPD3-202ENST00000561749 SPRR2GQ9BYE4 73 aa10.5□□□□□ -0.73
SMPD3-202ENST00000561749 ACYP2P14621 99 aa10.49□□□□□ -0.73
SMPD3-202ENST00000561749 KRTAP19-6Q3LI70 58 aa10.45□□□□□ -0.74
SMPD3-202ENST00000561749 CRIPTQ9P021 101 aa10.43□□□□□ -0.74
SMPD3-202ENST00000561749 KRTAP19-8Q3LI54 63 aa10.4□□□□□ -0.74
SMPD3-202ENST00000561749 MT1BP07438 61 aa10.39□□□□□ -0.75
SMPD3-202ENST00000561749 Q5VV11 94 aa10.39□□□□□ -0.75
SMPD3-202ENST00000561749 COX7CP15954 63 aa10.38□□□□□ -0.75
SMPD3-202ENST00000561749 SPANXA2-OT1Q8N9U9 137 aa10.37□□□□□ -0.75
SMPD3-202ENST00000561749 FCGBPQ9Y6R7 5405 aaPredicted RBP10.37□□□□□ -0.75
SMPD3-202ENST00000561749 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
SMPD3-202ENST00000561749 P0C880 135 aa10.32□□□□□ -0.76
SMPD3-202ENST00000561749 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.28□□□□□ -0.76
SMPD3-202ENST00000561749 SPTSSBQ8NFR3 76 aa10.28□□□□□ -0.76
SMPD3-202ENST00000561749 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
SMPD3-202ENST00000561749 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
SMPD3-202ENST00000561749 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
SMPD3-202ENST00000561749 R4GN34 69 aa10.18□□□□□ -0.78
SMPD3-202ENST00000561749 H7BZZ5 65 aa10.15□□□□□ -0.78
SMPD3-202ENST00000561749 M0QZ58 72 aa10.15□□□□□ -0.78
SMPD3-202ENST00000561749 A6NN06 94 aa10.13□□□□□ -0.79
SMPD3-202ENST00000561749 COA5Q86WW8 74 aa10.13□□□□□ -0.79
SMPD3-202ENST00000561749 KRTAP10-5P60370 271 aa10.06□□□□□ -0.8
SMPD3-202ENST00000561749 KRTAP9-7A8MTY7 169 aa10.05□□□□□ -0.8
SMPD3-202ENST00000561749 CCDC179H3BU77 68 aa10.03□□□□□ -0.8
SMPD3-202ENST00000561749 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
SMPD3-202ENST00000561749 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
SMPD3-202ENST00000561749 PLAC4Q8WY50 150 aa9.96□□□□□ -0.82
SMPD3-202ENST00000561749 MT1XP80297 61 aa9.82□□□□□ -0.84
SMPD3-202ENST00000561749 KRTAP13-4Q3LI77 160 aa9.8□□□□□ -0.84
SMPD3-202ENST00000561749 SYNE2Q8WXH0 6885 aaKnown RBP9.8□□□□□ -0.84
SMPD3-202ENST00000561749 SEC61GP60059 68 aa9.78□□□□□ -0.84
SMPD3-202ENST00000561749 PRO2289Q9P1D8 64 aa9.78□□□□□ -0.84
SMPD3-202ENST00000561749 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
SMPD3-202ENST00000561749 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.86
SMPD3-202ENST00000561749 KRTAP6-3Q3LI67 103 aa9.7□□□□□ -0.86
SMPD3-202ENST00000561749 TMEM258P61165 79 aa9.61□□□□□ -0.87
SMPD3-202ENST00000561749 A0A1B0GU33 70 aa9.6□□□□□ -0.87
SMPD3-202ENST00000561749 A0A1B0GU69 56 aa9.59□□□□□ -0.87
SMPD3-202ENST00000561749 SPATA8Q6RVD6 105 aa9.59□□□□□ -0.87
SMPD3-202ENST00000561749 A0A0D9SG42 100 aa9.56□□□□□ -0.88
SMPD3-202ENST00000561749 KRTAP12-2P59991 146 aa9.46□□□□□ -0.9
SMPD3-202ENST00000561749 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
SMPD3-202ENST00000561749 KRTAP10-7P60409 375 aaPredicted RBP9.41□□□□□ -0.9
SMPD3-202ENST00000561749 KRTAP5-9P26371 169 aa9.38□□□□□ -0.91
SMPD3-202ENST00000561749 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
SMPD3-202ENST00000561749 LINC01558Q9Y6Z2 57 aa9.38□□□□□ -0.91
SMPD3-202ENST00000561749 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
SMPD3-202ENST00000561749 KMT2DO14686 5537 aa9.35□□□□□ -0.91
SMPD3-202ENST00000561749 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
SMPD3-202ENST00000561749 A8MU10 97 aa9.32□□□□□ -0.92
SMPD3-202ENST00000561749 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
SMPD3-202ENST00000561749 KRTAP8-1Q8IUC2 63 aa9.32□□□□□ -0.92
SMPD3-202ENST00000561749 KRTAP4-8Q9BYQ9 185 aa9.32□□□□□ -0.92
SMPD3-202ENST00000561749 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
SMPD3-202ENST00000561749 KRTAP10-12P60413 245 aa9.3□□□□□ -0.92
SMPD3-202ENST00000561749 SPRR2FQ96RM1 72 aa9.25□□□□□ -0.93
SMPD3-202ENST00000561749 MUC12Q9UKN1 5478 aa9.21□□□□□ -0.94
SMPD3-202ENST00000561749 NEBP20929 6669 aa9.19□□□□□ -0.94
SMPD3-202ENST00000561749 PCP4P48539 62 aa9.08□□□□□ -0.96
SMPD3-202ENST00000561749 UQCR11O14957 56 aa9.07□□□□□ -0.96
SMPD3-202ENST00000561749 SPRR2EP22531 72 aa9.04□□□□□ -0.96
SMPD3-202ENST00000561749 SPRR2BP35325 72 aa9.04□□□□□ -0.96
SMPD3-202ENST00000561749 SPRR2AP35326 72 aa9.04□□□□□ -0.96
SMPD3-202ENST00000561749 PSPHP1O15172 72 aa8.99□□□□□ -0.97
SMPD3-202ENST00000561749 V9GYY9 64 aa8.99□□□□□ -0.97
SMPD3-202ENST00000561749 MDN1Q9NU22 5596 aa8.97□□□□□ -0.97
SMPD3-202ENST00000561749 Q1T7F1 81 aa8.97□□□□□ -0.97
SMPD3-202ENST00000561749 LCE1AQ5T7P2 110 aa8.94□□□□□ -0.98
SMPD3-202ENST00000561749 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
SMPD3-202ENST00000561749 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.98
SMPD3-202ENST00000561749 KRTAP20-1Q3LI63 56 aa8.85□□□□□ -0.99
SMPD3-202ENST00000561749 RPS28P62857 69 aaKnown RBP8.78□□□□□ -1
SMPD3-202ENST00000561749 KRTAP19-7Q3SYF9 63 aa8.77□□□□□ -1.01
SMPD3-202ENST00000561749 TNP1P09430 55 aa8.76□□□□□ -1.01
SMPD3-202ENST00000561749 SPRR2DP22532 72 aa8.73□□□□□ -1.01
SMPD3-202ENST00000561749 KRTAP2-3P0C7H8 128 aa8.69□□□□□ -1.02
SMPD3-202ENST00000561749 KRTAP2-4Q9BYR9 128 aa8.69□□□□□ -1.02
SMPD3-202ENST00000561749 A6NED7 52 aa8.68□□□□□ -1.02
SMPD3-202ENST00000561749 MT1EP04732 61 aa8.68□□□□□ -1.02
SMPD3-202ENST00000561749 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
SMPD3-202ENST00000561749 K7ERS5 55 aa8.66□□□□□ -1.02
SMPD3-202ENST00000561749 LCE3AQ5TA76 89 aa8.65□□□□□ -1.02
SMPD3-202ENST00000561749 KRTAP19-3Q7Z4W3 81 aa8.52□□□□□ -1.05
SMPD3-202ENST00000561749 LCE5AQ5TCM9 118 aa8.48□□□□□ -1.05
SMPD3-202ENST00000561749 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms