RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 S4R3F8 94 aa13.25□□□□□ -0.29
AP4E1-207ENST00000561441 LCA10Q71F78 164 aa13.24□□□□□ -0.29
AP4E1-207ENST00000561441 KRTAP3-3Q9BYR6 98 aa13.2□□□□□ -0.3
AP4E1-207ENST00000561441 SPTSSBQ8NFR3 76 aa13.19□□□□□ -0.3
AP4E1-207ENST00000561441 RNF213Q63HN8 5207 aa13.16□□□□□ -0.3
AP4E1-207ENST00000561441 Q1T7F1 81 aa13.13□□□□□ -0.31
AP4E1-207ENST00000561441 V9GYY9 64 aa13.06□□□□□ -0.32
AP4E1-207ENST00000561441 LINC01558Q9Y6Z2 57 aa13.06□□□□□ -0.32
AP4E1-207ENST00000561441 LCE2CQ5TA81 110 aa13.03□□□□□ -0.32
AP4E1-207ENST00000561441 CSAG1Q6PB30 78 aa12.97□□□□□ -0.33
AP4E1-207ENST00000561441 PRR15LQ9BU68 103 aa12.91□□□□□ -0.34
AP4E1-207ENST00000561441 PSPHP1O15172 72 aa12.91□□□□□ -0.34
AP4E1-207ENST00000561441 A0A1B0GU69 56 aa12.88□□□□□ -0.35
AP4E1-207ENST00000561441 FLGP20930 4061 aaPredicted RBP12.84□□□□□ -0.35
AP4E1-207ENST00000561441 SEC61GP60059 68 aa12.81□□□□□ -0.36
AP4E1-207ENST00000561441 Q5VV11 94 aa12.79□□□□□ -0.36
AP4E1-207ENST00000561441 FAT4Q6V0I7 4981 aa12.77□□□□□ -0.37
AP4E1-207ENST00000561441 MT1HP80294 61 aa12.76□□□□□ -0.37
AP4E1-207ENST00000561441 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
AP4E1-207ENST00000561441 H0YAA0 97 aa12.68□□□□□ -0.38
AP4E1-207ENST00000561441 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
AP4E1-207ENST00000561441 ADM2Q7Z4H4 148 aa12.67□□□□□ -0.38
AP4E1-207ENST00000561441 M0R2T5 61 aa12.61□□□□□ -0.39
AP4E1-207ENST00000561441 P0C880 135 aa12.59□□□□□ -0.39
AP4E1-207ENST00000561441 A0A1B0GU33 70 aa12.52□□□□□ -0.4
AP4E1-207ENST00000561441 A6NED7 52 aa12.5□□□□□ -0.41
AP4E1-207ENST00000561441 UQCR11O14957 56 aa12.46□□□□□ -0.41
AP4E1-207ENST00000561441 MIR22HGQ0VDD5 57 aa12.33□□□□□ -0.44
AP4E1-207ENST00000561441 SPATA8Q6RVD6 105 aa12.33□□□□□ -0.44
AP4E1-207ENST00000561441 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
AP4E1-207ENST00000561441 KRTAP13-4Q3LI77 160 aa12.32□□□□□ -0.44
AP4E1-207ENST00000561441 LCE2AQ5TA79 106 aaPredicted RBP12.32□□□□□ -0.44
AP4E1-207ENST00000561441 BRK1Q8WUW1 75 aa12.29□□□□□ -0.44
AP4E1-207ENST00000561441 KRTAP9-8Q9BYQ0 159 aa12.29□□□□□ -0.44
AP4E1-207ENST00000561441 CDC42SE1Q9NRR8 79 aa12.26□□□□□ -0.45
AP4E1-207ENST00000561441 M0QZ58 72 aa12.24□□□□□ -0.45
AP4E1-207ENST00000561441 MT2AP02795 61 aa12.24□□□□□ -0.45
AP4E1-207ENST00000561441 A8MU10 97 aa12.23□□□□□ -0.45
AP4E1-207ENST00000561441 R4GN34 69 aa12.21□□□□□ -0.46
AP4E1-207ENST00000561441 MT1FP04733 61 aa12.17□□□□□ -0.46
AP4E1-207ENST00000561441 CRIPTQ9P021 101 aa12.15□□□□□ -0.46
AP4E1-207ENST00000561441 KRTAP10-10P60014 251 aa12.12□□□□□ -0.47
AP4E1-207ENST00000561441 A0A0D9SG42 100 aa12.06□□□□□ -0.48
AP4E1-207ENST00000561441 LINC01554Q52M75 96 aa11.98□□□□□ -0.49
AP4E1-207ENST00000561441 PRO0628Q9UI54 55 aa11.97□□□□□ -0.49
AP4E1-207ENST00000561441 SPRR2GQ9BYE4 73 aa11.94□□□□□ -0.5
AP4E1-207ENST00000561441 KRTAP19-1Q8IUB9 90 aa11.93□□□□□ -0.5
AP4E1-207ENST00000561441 KRTAP9-3Q9BYQ3 159 aa11.85□□□□□ -0.51
AP4E1-207ENST00000561441 KRTAP12-1P59990 96 aa11.83□□□□□ -0.52
AP4E1-207ENST00000561441 KRTAP12-2P59991 146 aa11.8□□□□□ -0.52
AP4E1-207ENST00000561441 SPINT4Q6UDR6 99 aa11.78□□□□□ -0.52
AP4E1-207ENST00000561441 A6NN06 94 aa11.76□□□□□ -0.53
AP4E1-207ENST00000561441 K7ERS5 55 aa11.75□□□□□ -0.53
AP4E1-207ENST00000561441 KRTAP19-8Q3LI54 63 aa11.64□□□□□ -0.55
AP4E1-207ENST00000561441 PMAIP1Q13794 54 aa11.61□□□□□ -0.55
AP4E1-207ENST00000561441 LCE2BO14633 110 aa11.53□□□□□ -0.56
AP4E1-207ENST00000561441 PLAC4Q8WY50 150 aa11.51□□□□□ -0.57
AP4E1-207ENST00000561441 MT1BP07438 61 aa11.5□□□□□ -0.57
AP4E1-207ENST00000561441 CAMK2N1Q7Z7J9 78 aa11.42□□□□□ -0.58
AP4E1-207ENST00000561441 ROMO1P60602 79 aa11.28□□□□□ -0.6
AP4E1-207ENST00000561441 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
AP4E1-207ENST00000561441 C10orf95Q9H7T3 257 aa11.22□□□□□ -0.61
AP4E1-207ENST00000561441 USH2AO75445 5202 aa11.18□□□□□ -0.62
AP4E1-207ENST00000561441 MT1XP80297 61 aa11.11□□□□□ -0.63
AP4E1-207ENST00000561441 KRTAP10-5P60370 271 aa11.09□□□□□ -0.63
AP4E1-207ENST00000561441 KTN1-AS1Q86SY8 53 aa11.09□□□□□ -0.63
AP4E1-207ENST00000561441 PRO2289Q9P1D8 64 aa10.97□□□□□ -0.65
AP4E1-207ENST00000561441 PRAC1Q96KF2 57 aa10.91□□□□□ -0.66
AP4E1-207ENST00000561441 KRTAP25-1Q3LHN0 102 aa10.87□□□□□ -0.67
AP4E1-207ENST00000561441 SVIPQ8NHG7 77 aa10.87□□□□□ -0.67
AP4E1-207ENST00000561441 TNP1P09430 55 aa10.85□□□□□ -0.67
AP4E1-207ENST00000561441 KRTAP19-6Q3LI70 58 aa10.84□□□□□ -0.67
AP4E1-207ENST00000561441 SSPOA2VEC9 5147 aa10.83□□□□□ -0.68
AP4E1-207ENST00000561441 KRTAP9-2Q9BYQ4 174 aa10.82□□□□□ -0.68
AP4E1-207ENST00000561441 FSIP2Q5CZC0 6907 aa10.76□□□□□ -0.69
AP4E1-207ENST00000561441 KRTAP10-7P60409 375 aaPredicted RBP10.66□□□□□ -0.7
AP4E1-207ENST00000561441 KRTAP10-12P60413 245 aa10.53□□□□□ -0.72
AP4E1-207ENST00000561441 KRTAP23-1A1A580 65 aa10.5□□□□□ -0.73
AP4E1-207ENST00000561441 PP632Q6XCG6 107 aa10.47□□□□□ -0.73
AP4E1-207ENST00000561441 LCE3AQ5TA76 89 aa10.44□□□□□ -0.74
AP4E1-207ENST00000561441 CRCT1Q9UGL9 99 aa10.43□□□□□ -0.74
AP4E1-207ENST00000561441 FCGBPQ9Y6R7 5405 aaPredicted RBP10.38□□□□□ -0.75
AP4E1-207ENST00000561441 KRTAP4-8A0A0G2JLE6 195 aa10.27□□□□□ -0.77
AP4E1-207ENST00000561441 KRTAP4-8Q9BYQ9 185 aa10.27□□□□□ -0.77
AP4E1-207ENST00000561441 KRTAP8-1Q8IUC2 63 aa10.22□□□□□ -0.77
AP4E1-207ENST00000561441 KMT2DO14686 5537 aa10.16□□□□□ -0.78
AP4E1-207ENST00000561441 KRTAP19-5Q3LI72 72 aa10.02□□□□□ -0.81
AP4E1-207ENST00000561441 KRTAP12-3P60328 96 aa10.01□□□□□ -0.81
AP4E1-207ENST00000561441 KRTAP9-6A0A140TA67 174 aa10□□□□□ -0.81
AP4E1-207ENST00000561441 KRTAP19-7Q3SYF9 63 aa9.92□□□□□ -0.82
AP4E1-207ENST00000561441 MACF1Q9UPN3 7388 aaKnown RBP9.85□□□□□ -0.83
AP4E1-207ENST00000561441 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
AP4E1-207ENST00000561441 MT1EP04732 61 aa9.74□□□□□ -0.85
AP4E1-207ENST00000561441 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.66□□□□□ -0.86
AP4E1-207ENST00000561441 SPRR2FQ96RM1 72 aa9.61□□□□□ -0.87
AP4E1-207ENST00000561441 SYNE2Q8WXH0 6885 aaKnown RBP9.59□□□□□ -0.87
AP4E1-207ENST00000561441 KRTAP5-9P26371 169 aa9.54□□□□□ -0.88
AP4E1-207ENST00000561441 MT1LQ93083 61 aa9.54□□□□□ -0.88
AP4E1-207ENST00000561441 KRTAP6-3Q3LI67 103 aa9.42□□□□□ -0.9
AP4E1-207ENST00000561441 MUC12Q9UKN1 5478 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms