RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	FAM236A	A0A1B0GUQ0	79 aa		12	□□□□□ -0.49
TCF12-222	ENST00000561152	FAM236B	A0A1B0GV22	79 aa		12	□□□□□ -0.49
TCF12-222	ENST00000561152	USH2A	O75445	5202 aa		12	□□□□□ -0.49
TCF12-222	ENST00000561152	KRTAP3-3	Q9BYR6	98 aa		11.97	□□□□□ -0.49
TCF12-222	ENST00000561152	TRAV7	A0A075B6U4	112 aa		11.94	□□□□□ -0.5
TCF12-222	ENST00000561152	NDUFC1	O43677	76 aa		11.92	□□□□□ -0.5
TCF12-222	ENST00000561152	SSPO	A2VEC9	5147 aa		11.82	□□□□□ -0.52
TCF12-222	ENST00000561152	DMAC1	Q96GE9	116 aa		11.79	□□□□□ -0.52
TCF12-222	ENST00000561152		H0YAA0	97 aa		11.71	□□□□□ -0.53
TCF12-222	ENST00000561152	KRTAP19-1	Q8IUB9	90 aa		11.69	□□□□□ -0.54
TCF12-222	ENST00000561152	SERP2	Q8N6R1	65 aa		11.66	□□□□□ -0.54
TCF12-222	ENST00000561152	CRIPT	Q9P021	101 aa		11.65	□□□□□ -0.54
TCF12-222	ENST00000561152	SPRR2G	Q9BYE4	73 aa		11.63	□□□□□ -0.55
TCF12-222	ENST00000561152	SNURF	Q9Y675	71 aa		11.62	□□□□□ -0.55
TCF12-222	ENST00000561152	ACYP2	P14621	99 aa		11.61	□□□□□ -0.55
TCF12-222	ENST00000561152	KRTAP19-6	Q3LI70	58 aa		11.59	□□□□□ -0.55
TCF12-222	ENST00000561152	C20orf197	Q8N268	126 aa		11.57	□□□□□ -0.56
TCF12-222	ENST00000561152	ADM2	Q7Z4H4	148 aa		11.56	□□□□□ -0.56
TCF12-222	ENST00000561152		Q5VV11	94 aa		11.52	□□□□□ -0.57
TCF12-222	ENST00000561152	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF12-222	ENST00000561152	KRTAP19-8	Q3LI54	63 aa		11.49	□□□□□ -0.57
TCF12-222	ENST00000561152	SPANXA2-OT1	Q8N9U9	137 aa		11.47	□□□□□ -0.57
TCF12-222	ENST00000561152	SPTSSB	Q8NFR3	76 aa		11.45	□□□□□ -0.58
TCF12-222	ENST00000561152	CHKB-CPT1B	H3BT56	60 aa		11.41	□□□□□ -0.58
TCF12-222	ENST00000561152	MT1B	P07438	61 aa		11.41	□□□□□ -0.58
TCF12-222	ENST00000561152	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	11.39	□□□□□ -0.59
TCF12-222	ENST00000561152	COX7C	P15954	63 aa		11.39	□□□□□ -0.59
TCF12-222	ENST00000561152		P0C880	135 aa		11.3	□□□□□ -0.6
TCF12-222	ENST00000561152		R4GN34	69 aa		11.29	□□□□□ -0.6
TCF12-222	ENST00000561152	KRTAP3-2	Q9BYR7	98 aa		11.24	□□□□□ -0.61
TCF12-222	ENST00000561152		A6NN06	94 aa		11.23	□□□□□ -0.61
TCF12-222	ENST00000561152		M0QZ58	72 aa		11.19	□□□□□ -0.62
TCF12-222	ENST00000561152	ANAPC13	Q9BS18	74 aa		11.18	□□□□□ -0.62
TCF12-222	ENST00000561152	KRTAP9-7	A8MTY7	169 aa		11.16	□□□□□ -0.62
TCF12-222	ENST00000561152	MACF1	Q9UPN3	7388 aa	Known RBP	11.15	□□□□□ -0.62
TCF12-222	ENST00000561152		H7BZZ5	65 aa		11.12	□□□□□ -0.63
TCF12-222	ENST00000561152	KRTAP10-5	P60370	271 aa		11.12	□□□□□ -0.63
TCF12-222	ENST00000561152	COA5	Q86WW8	74 aa		11.11	□□□□□ -0.63
TCF12-222	ENST00000561152	PLAC4	Q8WY50	150 aa		11.07	□□□□□ -0.64
TCF12-222	ENST00000561152	CYSTM1	Q9H1C7	97 aa		11.07	□□□□□ -0.64
TCF12-222	ENST00000561152	LINC01554	Q52M75	96 aa		10.99	□□□□□ -0.65
TCF12-222	ENST00000561152	PRO2289	Q9P1D8	64 aa		10.93	□□□□□ -0.66
TCF12-222	ENST00000561152	SYNE2	Q8WXH0	6885 aa	Known RBP	10.93	□□□□□ -0.66
TCF12-222	ENST00000561152	CCDC179	H3BU77	68 aa		10.89	□□□□□ -0.67
TCF12-222	ENST00000561152	SEC61G	P60059	68 aa		10.87	□□□□□ -0.67
TCF12-222	ENST00000561152	SERP1	Q9Y6X1	66 aa		10.83	□□□□□ -0.68
TCF12-222	ENST00000561152	MT1X	P80297	61 aa		10.8	□□□□□ -0.68
TCF12-222	ENST00000561152	KRTAP6-3	Q3LI67	103 aa		10.79	□□□□□ -0.68
TCF12-222	ENST00000561152	ATP5E	P56381	51 aa	Predicted RBP	10.76	□□□□□ -0.69
TCF12-222	ENST00000561152	KRTAP13-4	Q3LI77	160 aa		10.68	□□□□□ -0.7
TCF12-222	ENST00000561152		A0A1B0GU33	70 aa		10.59	□□□□□ -0.71
TCF12-222	ENST00000561152		A0A1B0GU69	56 aa		10.57	□□□□□ -0.72
TCF12-222	ENST00000561152	TMEM258	P61165	79 aa		10.57	□□□□□ -0.72
TCF12-222	ENST00000561152	KRTAP12-2	P59991	146 aa		10.52	□□□□□ -0.73
TCF12-222	ENST00000561152	SPATA8	Q6RVD6	105 aa		10.48	□□□□□ -0.73
TCF12-222	ENST00000561152		A0A0D9SG42	100 aa		10.44	□□□□□ -0.74
TCF12-222	ENST00000561152	CAMK2N1	Q7Z7J9	78 aa		10.44	□□□□□ -0.74
TCF12-222	ENST00000561152	KRTAP5-9	P26371	169 aa		10.43	□□□□□ -0.74
TCF12-222	ENST00000561152	PRR15L	Q9BU68	103 aa		10.41	□□□□□ -0.74
TCF12-222	ENST00000561152	KMT2D	O14686	5537 aa		10.34	□□□□□ -0.75
TCF12-222	ENST00000561152	SMIM26	A0A096LP01	95 aa		10.33	□□□□□ -0.76
TCF12-222	ENST00000561152	LINC01558	Q9Y6Z2	57 aa		10.32	□□□□□ -0.76
TCF12-222	ENST00000561152	KRTAP8-1	Q8IUC2	63 aa		10.31	□□□□□ -0.76
TCF12-222	ENST00000561152	MUC12	Q9UKN1	5478 aa		10.3	□□□□□ -0.76
TCF12-222	ENST00000561152	KRTAP10-7	P60409	375 aa	Predicted RBP	10.3	□□□□□ -0.76
TCF12-222	ENST00000561152	SPINT4	Q6UDR6	99 aa		10.3	□□□□□ -0.76
TCF12-222	ENST00000561152	KRTAP10-12	P60413	245 aa		10.28	□□□□□ -0.76
TCF12-222	ENST00000561152	KRTAP12-1	P59990	96 aa		10.23	□□□□□ -0.77
TCF12-222	ENST00000561152	NEB	P20929	6669 aa		10.22	□□□□□ -0.77
TCF12-222	ENST00000561152	SPRR2F	Q96RM1	72 aa		10.22	□□□□□ -0.77
TCF12-222	ENST00000561152	KRTAP4-8	A0A0G2JLE6	195 aa		10.19	□□□□□ -0.78
TCF12-222	ENST00000561152	KRTAP4-8	Q9BYQ9	185 aa		10.19	□□□□□ -0.78
TCF12-222	ENST00000561152		A8MU10	97 aa		10.14	□□□□□ -0.79
TCF12-222	ENST00000561152	MDN1	Q9NU22	5596 aa		10.07	□□□□□ -0.8
TCF12-222	ENST00000561152	UQCR11	O14957	56 aa		10.04	□□□□□ -0.8
TCF12-222	ENST00000561152	SPRR2E	P22531	72 aa		9.99	□□□□□ -0.81
TCF12-222	ENST00000561152	SPRR2B	P35325	72 aa		9.99	□□□□□ -0.81
TCF12-222	ENST00000561152	SPRR2A	P35326	72 aa		9.99	□□□□□ -0.81
TCF12-222	ENST00000561152		V9GYY9	64 aa		9.99	□□□□□ -0.81
TCF12-222	ENST00000561152		Q1T7F1	81 aa		9.87	□□□□□ -0.83
TCF12-222	ENST00000561152	LCE1A	Q5T7P2	110 aa		9.87	□□□□□ -0.83
TCF12-222	ENST00000561152	PCP4	P48539	62 aa		9.86	□□□□□ -0.83
TCF12-222	ENST00000561152	KRTAP20-1	Q3LI63	56 aa		9.83	□□□□□ -0.84
TCF12-222	ENST00000561152	MIR22HG	Q0VDD5	57 aa		9.81	□□□□□ -0.84
TCF12-222	ENST00000561152	PSPHP1	O15172	72 aa		9.8	□□□□□ -0.84
TCF12-222	ENST00000561152	C10orf95	Q9H7T3	257 aa		9.73	□□□□□ -0.85
TCF12-222	ENST00000561152	TNP1	P09430	55 aa		9.72	□□□□□ -0.85
TCF12-222	ENST00000561152	KRTAP2-3	P0C7H8	128 aa		9.68	□□□□□ -0.86
TCF12-222	ENST00000561152	RPS28	P62857	69 aa	Known RBP	9.68	□□□□□ -0.86
TCF12-222	ENST00000561152	KRTAP2-4	Q9BYR9	128 aa		9.68	□□□□□ -0.86
TCF12-222	ENST00000561152	SPRR2D	P22532	72 aa		9.66	□□□□□ -0.86
TCF12-222	ENST00000561152		K7ERS5	55 aa		9.64	□□□□□ -0.87
TCF12-222	ENST00000561152	KRTAP19-7	Q3SYF9	63 aa		9.64	□□□□□ -0.87
TCF12-222	ENST00000561152	MT1E	P04732	61 aa		9.56	□□□□□ -0.88
TCF12-222	ENST00000561152		A6NED7	52 aa		9.53	□□□□□ -0.88
TCF12-222	ENST00000561152	KRTAP19-5	Q3LI72	72 aa		9.5	□□□□□ -0.89
TCF12-222	ENST00000561152	LCE3A	Q5TA76	89 aa		9.47	□□□□□ -0.89
TCF12-222	ENST00000561152	KRTAP19-3	Q7Z4W3	81 aa		9.43	□□□□□ -0.9
TCF12-222	ENST00000561152	KRTAP2-2	Q9BYT5	123 aa		9.4	□□□□□ -0.9
TCF12-222	ENST00000561152	KRTAP2-1	Q9BYU5	128 aa		9.4	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms