RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 FAT3Q8TDW7 4589 aa13.28□□□□□ -0.28
SHF-207ENST00000560540 C9orf92A6NGG3 77 aa13.24□□□□□ -0.29
SHF-207ENST00000560540 TNXBP22105 4242 aa13.23□□□□□ -0.29
SHF-207ENST00000560540 KRTAP3-1Q9BYR8 98 aa13.18□□□□□ -0.3
SHF-207ENST00000560540 LINC01554Q52M75 96 aa13.16□□□□□ -0.3
SHF-207ENST00000560540 H0YAA0 97 aa13.14□□□□□ -0.31
SHF-207ENST00000560540 KRTAP10-8P60410 259 aa13.12□□□□□ -0.31
SHF-207ENST00000560540 A0A1B0GU33 70 aa13.08□□□□□ -0.32
SHF-207ENST00000560540 MT1HL1P0DM35 61 aa13.06□□□□□ -0.32
SHF-207ENST00000560540 CSAG1Q6PB30 78 aa13.05□□□□□ -0.32
SHF-207ENST00000560540 H1FX-AS1Q4G0G2 97 aa13.04□□□□□ -0.32
SHF-207ENST00000560540 DMBT1Q9UGM3 2413 aaPredicted RBP13.03□□□□□ -0.32
SHF-207ENST00000560540 COX6B2Q6YFQ2 88 aa12.99□□□□□ -0.33
SHF-207ENST00000560540 HERC1Q15751 4861 aa12.87□□□□□ -0.35
SHF-207ENST00000560540 J3QL48 77 aa12.77□□□□□ -0.36
SHF-207ENST00000560540 KRTAP25-1Q3LHN0 102 aa12.74□□□□□ -0.37
SHF-207ENST00000560540 K7ERS5 55 aa12.74□□□□□ -0.37
SHF-207ENST00000560540 RPL37P61927 97 aaKnown RBP12.65□□□□□ -0.38
SHF-207ENST00000560540 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
SHF-207ENST00000560540 KRTAP10-6P60371 365 aaPredicted RBP12.6□□□□□ -0.39
SHF-207ENST00000560540 XP32Q5T750 250 aa12.52□□□□□ -0.41
SHF-207ENST00000560540 S4R3F8 94 aa12.51□□□□□ -0.41
SHF-207ENST00000560540 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
SHF-207ENST00000560540 ROMO1P60602 79 aa12.47□□□□□ -0.41
SHF-207ENST00000560540 LPAP08519 4548 aa12.47□□□□□ -0.41
SHF-207ENST00000560540 KRTAP13-4Q3LI77 160 aa12.46□□□□□ -0.42
SHF-207ENST00000560540 H3BS24 57 aa12.37□□□□□ -0.43
SHF-207ENST00000560540 HMCN2Q8NDA2 5059 aa12.36□□□□□ -0.43
SHF-207ENST00000560540 CRIPTQ9P021 101 aa12.33□□□□□ -0.44
SHF-207ENST00000560540 TPRXLQ17RH7 258 aa12.33□□□□□ -0.44
SHF-207ENST00000560540 A0A0D9SG42 100 aa12.32□□□□□ -0.44
SHF-207ENST00000560540 LRP2P98164 4655 aa12.32□□□□□ -0.44
SHF-207ENST00000560540 P0C880 135 aa12.27□□□□□ -0.45
SHF-207ENST00000560540 UBR4Q5T4S7 5183 aa12.12□□□□□ -0.47
SHF-207ENST00000560540 KRTAP12-2P59991 146 aa12.08□□□□□ -0.48
SHF-207ENST00000560540 KRTAP12-1P59990 96 aa12.02□□□□□ -0.48
SHF-207ENST00000560540 M0QZ58 72 aa11.99□□□□□ -0.49
SHF-207ENST00000560540 C10orf95Q9H7T3 257 aa11.93□□□□□ -0.5
SHF-207ENST00000560540 SPINT4Q6UDR6 99 aa11.91□□□□□ -0.5
SHF-207ENST00000560540 MUC17Q685J3 4493 aa11.91□□□□□ -0.5
SHF-207ENST00000560540 RNF213Q63HN8 5207 aa11.89□□□□□ -0.51
SHF-207ENST00000560540 SEC61BP60468 96 aaKnown RBP11.88□□□□□ -0.51
SHF-207ENST00000560540 MUC2Q02817 5179 aa11.83□□□□□ -0.52
SHF-207ENST00000560540 KRTAP4-1Q9BYQ7 146 aa11.8□□□□□ -0.52
SHF-207ENST00000560540 KRTAP15-1Q3LI76 137 aa11.66□□□□□ -0.54
SHF-207ENST00000560540 R4GN34 69 aa11.59□□□□□ -0.55
SHF-207ENST00000560540 KRTAP19-2Q3LHN2 52 aa11.4□□□□□ -0.58
SHF-207ENST00000560540 NDUFAF8A1L188 74 aa11.37□□□□□ -0.59
SHF-207ENST00000560540 LORP23490 312 aaPredicted RBP11.36□□□□□ -0.59
SHF-207ENST00000560540 FAT4Q6V0I7 4981 aa11.33□□□□□ -0.6
SHF-207ENST00000560540 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
SHF-207ENST00000560540 FLGP20930 4061 aaPredicted RBP11.23□□□□□ -0.61
SHF-207ENST00000560540 PP632Q6XCG6 107 aa11.05□□□□□ -0.64
SHF-207ENST00000560540 PLAC4Q8WY50 150 aa11.05□□□□□ -0.64
SHF-207ENST00000560540 MT1HP80294 61 aa11.02□□□□□ -0.65
SHF-207ENST00000560540 CAMK2N1Q7Z7J9 78 aa11.01□□□□□ -0.65
SHF-207ENST00000560540 M0R2T5 61 aa10.87□□□□□ -0.67
SHF-207ENST00000560540 LCE2AQ5TA79 106 aaPredicted RBP10.79□□□□□ -0.68
SHF-207ENST00000560540 KRTAP23-1A1A580 65 aa10.7□□□□□ -0.7
SHF-207ENST00000560540 TNP1P09430 55 aa10.67□□□□□ -0.7
SHF-207ENST00000560540 LUZP6Q538Z0 58 aa10.6□□□□□ -0.71
SHF-207ENST00000560540 KRTAP9-8Q9BYQ0 159 aa10.58□□□□□ -0.72
SHF-207ENST00000560540 MT2AP02795 61 aa10.53□□□□□ -0.72
SHF-207ENST00000560540 MT1FP04733 61 aa10.48□□□□□ -0.73
SHF-207ENST00000560540 SPRR2GQ9BYE4 73 aa10.45□□□□□ -0.74
SHF-207ENST00000560540 KRTAP10-10P60014 251 aa10.41□□□□□ -0.74
SHF-207ENST00000560540 SPRR5A0A1B0GTR4 108 aa10.37□□□□□ -0.75
SHF-207ENST00000560540 KRTAP19-1Q8IUB9 90 aa10.32□□□□□ -0.76
SHF-207ENST00000560540 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
SHF-207ENST00000560540 FSIP2Q5CZC0 6907 aa10.22□□□□□ -0.77
SHF-207ENST00000560540 KRTAP9-3Q9BYQ3 159 aa10.2□□□□□ -0.78
SHF-207ENST00000560540 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
SHF-207ENST00000560540 LCE3AQ5TA76 89 aa10.05□□□□□ -0.8
SHF-207ENST00000560540 LCE2BO14633 110 aa10□□□□□ -0.81
SHF-207ENST00000560540 KRTAP19-8Q3LI54 63 aa9.96□□□□□ -0.81
SHF-207ENST00000560540 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.81
SHF-207ENST00000560540 USH2AO75445 5202 aa9.95□□□□□ -0.82
SHF-207ENST00000560540 KRTAP8-1Q8IUC2 63 aa9.87□□□□□ -0.83
SHF-207ENST00000560540 MT1BP07438 61 aa9.85□□□□□ -0.83
SHF-207ENST00000560540 KRTAP10-5P60370 271 aa9.76□□□□□ -0.85
SHF-207ENST00000560540 MT1XP80297 61 aa9.74□□□□□ -0.85
SHF-207ENST00000560540 SSPOA2VEC9 5147 aa9.7□□□□□ -0.86
SHF-207ENST00000560540 KRTAP10-12P60413 245 aa9.63□□□□□ -0.87
SHF-207ENST00000560540 CRCT1Q9UGL9 99 aa9.62□□□□□ -0.87
SHF-207ENST00000560540 KRTAP9-6A0A140TA67 174 aa9.59□□□□□ -0.87
SHF-207ENST00000560540 KRTAP12-3P60328 96 aa9.58□□□□□ -0.88
SHF-207ENST00000560540 KRTAP10-7P60409 375 aaPredicted RBP9.44□□□□□ -0.9
SHF-207ENST00000560540 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
SHF-207ENST00000560540 FCGBPQ9Y6R7 5405 aaPredicted RBP9.38□□□□□ -0.91
SHF-207ENST00000560540 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
SHF-207ENST00000560540 INE1O15225 51 aa9.3□□□□□ -0.92
SHF-207ENST00000560540 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
SHF-207ENST00000560540 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
SHF-207ENST00000560540 LCE3CQ5T5A8 94 aa9.04□□□□□ -0.96
SHF-207ENST00000560540 KMT2DO14686 5537 aa9.03□□□□□ -0.96
SHF-207ENST00000560540 SYNE2Q8WXH0 6885 aaKnown RBP9□□□□□ -0.97
SHF-207ENST00000560540 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.95□□□□□ -0.98
SHF-207ENST00000560540 KRTAP4-8A0A0G2JLE6 195 aa8.85□□□□□ -0.99
SHF-207ENST00000560540 KRTAP4-8Q9BYQ9 185 aa8.85□□□□□ -0.99
SHF-207ENST00000560540 KRTAP9-7A8MTY7 169 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms