RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
LYSMD2-204ENST00000560491 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
LYSMD2-204ENST00000560491 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
LYSMD2-204ENST00000560491 C5orf47Q569G3 176 aa7.43□□□□□ -1.22
LYSMD2-204ENST00000560491 MT1FP04733 61 aa7.42□□□□□ -1.22
LYSMD2-204ENST00000560491 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
LYSMD2-204ENST00000560491 S4R3F8 94 aa7.4□□□□□ -1.22
LYSMD2-204ENST00000560491 LCA10Q71F78 164 aa7.37□□□□□ -1.23
LYSMD2-204ENST00000560491 H3BPC8 53 aa7.36□□□□□ -1.23
LYSMD2-204ENST00000560491 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
LYSMD2-204ENST00000560491 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
LYSMD2-204ENST00000560491 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
LYSMD2-204ENST00000560491 KRTAP4-2Q9BYR5 136 aa7.33□□□□□ -1.24
LYSMD2-204ENST00000560491 CSAG1Q6PB30 78 aa7.28□□□□□ -1.24
LYSMD2-204ENST00000560491 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
LYSMD2-204ENST00000560491 H3BS24 57 aa7.27□□□□□ -1.25
LYSMD2-204ENST00000560491 A8MUN3 132 aa7.26□□□□□ -1.25
LYSMD2-204ENST00000560491 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
LYSMD2-204ENST00000560491 SERP2Q8N6R1 65 aa7.2□□□□□ -1.26
LYSMD2-204ENST00000560491 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
LYSMD2-204ENST00000560491 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
LYSMD2-204ENST00000560491 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
LYSMD2-204ENST00000560491 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
LYSMD2-204ENST00000560491 USH2AO75445 5202 aa7.17□□□□□ -1.26
LYSMD2-204ENST00000560491 NDUFC1O43677 76 aa7.17□□□□□ -1.26
LYSMD2-204ENST00000560491 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
LYSMD2-204ENST00000560491 C20orf197Q8N268 126 aa7.15□□□□□ -1.26
LYSMD2-204ENST00000560491 COX7CP15954 63 aa7.06□□□□□ -1.28
LYSMD2-204ENST00000560491 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
LYSMD2-204ENST00000560491 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
LYSMD2-204ENST00000560491 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
LYSMD2-204ENST00000560491 ACYP2P14621 99 aa7.04□□□□□ -1.28
LYSMD2-204ENST00000560491 H0YAA0 97 aa7.02□□□□□ -1.29
LYSMD2-204ENST00000560491 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
LYSMD2-204ENST00000560491 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
LYSMD2-204ENST00000560491 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
LYSMD2-204ENST00000560491 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
LYSMD2-204ENST00000560491 ANAPC13Q9BS18 74 aa6.96□□□□□ -1.3
LYSMD2-204ENST00000560491 CYSTM1Q9H1C7 97 aa6.96□□□□□ -1.3
LYSMD2-204ENST00000560491 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
LYSMD2-204ENST00000560491 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
LYSMD2-204ENST00000560491 H7BZZ5 65 aa6.9□□□□□ -1.3
LYSMD2-204ENST00000560491 P0C880 135 aa6.89□□□□□ -1.31
LYSMD2-204ENST00000560491 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
LYSMD2-204ENST00000560491 MT1BP07438 61 aa6.88□□□□□ -1.31
LYSMD2-204ENST00000560491 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
LYSMD2-204ENST00000560491 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
LYSMD2-204ENST00000560491 Q5VV11 94 aa6.86□□□□□ -1.31
LYSMD2-204ENST00000560491 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
LYSMD2-204ENST00000560491 COA5Q86WW8 74 aa6.84□□□□□ -1.31
LYSMD2-204ENST00000560491 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
LYSMD2-204ENST00000560491 R4GN34 69 aa6.78□□□□□ -1.32
LYSMD2-204ENST00000560491 M0QZ58 72 aa6.76□□□□□ -1.33
LYSMD2-204ENST00000560491 A6NN06 94 aa6.67□□□□□ -1.34
LYSMD2-204ENST00000560491 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
LYSMD2-204ENST00000560491 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
LYSMD2-204ENST00000560491 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
LYSMD2-204ENST00000560491 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
LYSMD2-204ENST00000560491 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
LYSMD2-204ENST00000560491 TMEM258P61165 79 aa6.57□□□□□ -1.36
LYSMD2-204ENST00000560491 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
LYSMD2-204ENST00000560491 SEC61GP60059 68 aa6.56□□□□□ -1.36
LYSMD2-204ENST00000560491 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
LYSMD2-204ENST00000560491 MT1XP80297 61 aa6.52□□□□□ -1.37
LYSMD2-204ENST00000560491 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
LYSMD2-204ENST00000560491 A0A1B0GU69 56 aa6.47□□□□□ -1.37
LYSMD2-204ENST00000560491 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
LYSMD2-204ENST00000560491 A0A1B0GU33 70 aa6.45□□□□□ -1.38
LYSMD2-204ENST00000560491 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
LYSMD2-204ENST00000560491 PCP4P48539 62 aa6.42□□□□□ -1.38
LYSMD2-204ENST00000560491 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
LYSMD2-204ENST00000560491 A0A0D9SG42 100 aa6.39□□□□□ -1.39
LYSMD2-204ENST00000560491 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
LYSMD2-204ENST00000560491 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
LYSMD2-204ENST00000560491 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
LYSMD2-204ENST00000560491 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
LYSMD2-204ENST00000560491 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
LYSMD2-204ENST00000560491 A8MU10 97 aa6.26□□□□□ -1.41
LYSMD2-204ENST00000560491 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
LYSMD2-204ENST00000560491 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
LYSMD2-204ENST00000560491 KMT2DO14686 5537 aa6.26□□□□□ -1.41
LYSMD2-204ENST00000560491 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
LYSMD2-204ENST00000560491 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
LYSMD2-204ENST00000560491 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
LYSMD2-204ENST00000560491 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
LYSMD2-204ENST00000560491 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
LYSMD2-204ENST00000560491 UQCR11O14957 56 aa6.13□□□□□ -1.43
LYSMD2-204ENST00000560491 Q1T7F1 81 aa6.12□□□□□ -1.43
LYSMD2-204ENST00000560491 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
LYSMD2-204ENST00000560491 V9GYY9 64 aa6.12□□□□□ -1.43
LYSMD2-204ENST00000560491 PSPHP1O15172 72 aa6.11□□□□□ -1.43
LYSMD2-204ENST00000560491 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
LYSMD2-204ENST00000560491 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
LYSMD2-204ENST00000560491 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
LYSMD2-204ENST00000560491 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
LYSMD2-204ENST00000560491 NEBP20929 6669 aa5.97□□□□□ -1.45
LYSMD2-204ENST00000560491 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
LYSMD2-204ENST00000560491 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
LYSMD2-204ENST00000560491 SPRR2EP22531 72 aa5.92□□□□□ -1.46
LYSMD2-204ENST00000560491 SPRR2BP35325 72 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms