RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 NDUFC1O43677 76 aa3.42□□□□□ -1.86
SPG11-221ENST00000560299 C7orf65Q6ZTY9 151 aa3.42□□□□□ -1.86
SPG11-221ENST00000560299 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
SPG11-221ENST00000560299 IGKV2-30P06310 120 aa3.41□□□□□ -1.86
SPG11-221ENST00000560299 KLKP1Q107X0 134 aa3.41□□□□□ -1.86
SPG11-221ENST00000560299 PCOTHQ58A44 107 aa3.41□□□□□ -1.86
SPG11-221ENST00000560299 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
SPG11-221ENST00000560299 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
SPG11-221ENST00000560299 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
SPG11-221ENST00000560299 SPINK7P58062 85 aa3.39□□□□□ -1.87
SPG11-221ENST00000560299 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
SPG11-221ENST00000560299 H7BZZ5 65 aa3.34□□□□□ -1.87
SPG11-221ENST00000560299 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
SPG11-221ENST00000560299 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
SPG11-221ENST00000560299 HRES1P13985 223 aa3.33□□□□□ -1.88
SPG11-221ENST00000560299 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
SPG11-221ENST00000560299 TMEM258P61165 79 aa3.33□□□□□ -1.88
SPG11-221ENST00000560299 A8MUN3 132 aa3.31□□□□□ -1.88
SPG11-221ENST00000560299 SEC61GP60059 68 aa3.31□□□□□ -1.88
SPG11-221ENST00000560299 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
SPG11-221ENST00000560299 KRTAP3-1Q9BYR8 98 aa3.31□□□□□ -1.88
SPG11-221ENST00000560299 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
SPG11-221ENST00000560299 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
SPG11-221ENST00000560299 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
SPG11-221ENST00000560299 ACYP2P14621 99 aa3.3□□□□□ -1.88
SPG11-221ENST00000560299 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
SPG11-221ENST00000560299 DMAC1Q96GE9 116 aa3.28□□□□□ -1.88
SPG11-221ENST00000560299 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
SPG11-221ENST00000560299 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
SPG11-221ENST00000560299 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
SPG11-221ENST00000560299 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
SPG11-221ENST00000560299 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
SPG11-221ENST00000560299 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
SPG11-221ENST00000560299 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
SPG11-221ENST00000560299 COA5Q86WW8 74 aa3.22□□□□□ -1.89
SPG11-221ENST00000560299 SERP1Q9Y6X1 66 aa3.22□□□□□ -1.89
SPG11-221ENST00000560299 S4R3F8 94 aa3.21□□□□□ -1.9
SPG11-221ENST00000560299 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
SPG11-221ENST00000560299 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
SPG11-221ENST00000560299 LCA10Q71F78 164 aa3.17□□□□□ -1.9
SPG11-221ENST00000560299 V9GYY9 64 aa3.17□□□□□ -1.9
SPG11-221ENST00000560299 MT1HP80294 61 aa3.16□□□□□ -1.9
SPG11-221ENST00000560299 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
SPG11-221ENST00000560299 M0R2T5 61 aa3.14□□□□□ -1.91
SPG11-221ENST00000560299 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
SPG11-221ENST00000560299 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SPG11-221ENST00000560299 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
SPG11-221ENST00000560299 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
SPG11-221ENST00000560299 A0A1B0GU69 56 aa3.08□□□□□ -1.92
SPG11-221ENST00000560299 Q1T7F1 81 aa3.08□□□□□ -1.92
SPG11-221ENST00000560299 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
SPG11-221ENST00000560299 H0YAA0 97 aa3.07□□□□□ -1.92
SPG11-221ENST00000560299 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
SPG11-221ENST00000560299 FSIP2Q5CZC0 6907 aa3.05□□□□□ -1.92
SPG11-221ENST00000560299 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
SPG11-221ENST00000560299 PSPHP1O15172 72 aa3.01□□□□□ -1.93
SPG11-221ENST00000560299 A0A1B0GU33 70 aa3□□□□□ -1.93
SPG11-221ENST00000560299 UQCR11O14957 56 aa2.99□□□□□ -1.93
SPG11-221ENST00000560299 CRIPTQ9P021 101 aa2.99□□□□□ -1.93
SPG11-221ENST00000560299 USH2AO75445 5202 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 M0QZ58 72 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 P0C880 135 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 KRTAP10-10P60014 251 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 R4GN34 69 aa2.98□□□□□ -1.93
SPG11-221ENST00000560299 MT2AP02795 61 aa2.97□□□□□ -1.93
SPG11-221ENST00000560299 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
SPG11-221ENST00000560299 Q5VV11 94 aa2.97□□□□□ -1.93
SPG11-221ENST00000560299 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SPG11-221ENST00000560299 PRO0628Q9UI54 55 aa2.97□□□□□ -1.93
SPG11-221ENST00000560299 A6NED7 52 aa2.96□□□□□ -1.94
SPG11-221ENST00000560299 MT1FP04733 61 aa2.93□□□□□ -1.94
SPG11-221ENST00000560299 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
SPG11-221ENST00000560299 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
SPG11-221ENST00000560299 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
SPG11-221ENST00000560299 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
SPG11-221ENST00000560299 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
SPG11-221ENST00000560299 K7ERS5 55 aa2.88□□□□□ -1.95
SPG11-221ENST00000560299 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
SPG11-221ENST00000560299 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
SPG11-221ENST00000560299 A0A0D9SG42 100 aa2.87□□□□□ -1.95
SPG11-221ENST00000560299 A6NN06 94 aa2.86□□□□□ -1.95
SPG11-221ENST00000560299 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
SPG11-221ENST00000560299 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
SPG11-221ENST00000560299 A8MU10 97 aa2.84□□□□□ -1.95
SPG11-221ENST00000560299 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
SPG11-221ENST00000560299 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
SPG11-221ENST00000560299 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
SPG11-221ENST00000560299 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
SPG11-221ENST00000560299 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
SPG11-221ENST00000560299 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
SPG11-221ENST00000560299 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
SPG11-221ENST00000560299 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
SPG11-221ENST00000560299 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
SPG11-221ENST00000560299 MT1BP07438 61 aa2.75□□□□□ -1.97
SPG11-221ENST00000560299 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
SPG11-221ENST00000560299 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
SPG11-221ENST00000560299 PRO2289Q9P1D8 64 aa2.73□□□□□ -1.97
SPG11-221ENST00000560299 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
SPG11-221ENST00000560299 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms