RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
USP3-217ENST00000560070 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
USP3-217ENST00000560070 MT1FP04733 61 aa4.11□□□□□ -1.75
USP3-217ENST00000560070 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
USP3-217ENST00000560070 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
USP3-217ENST00000560070 SCGB1A1P11684 91 aa4.08□□□□□ -1.76
USP3-217ENST00000560070 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
USP3-217ENST00000560070 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
USP3-217ENST00000560070 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
USP3-217ENST00000560070 K7ERU9 68 aa4.06□□□□□ -1.76
USP3-217ENST00000560070 ATOX1O00244 68 aa4.06□□□□□ -1.76
USP3-217ENST00000560070 S4R3F8 94 aa4.06□□□□□ -1.76
USP3-217ENST00000560070 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
USP3-217ENST00000560070 MP68P56378 58 aa4.04□□□□□ -1.76
USP3-217ENST00000560070 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
USP3-217ENST00000560070 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
USP3-217ENST00000560070 LCA10Q71F78 164 aa4.03□□□□□ -1.76
USP3-217ENST00000560070 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
USP3-217ENST00000560070 IMUPQ9GZP8 106 aa3.99□□□□□ -1.77
USP3-217ENST00000560070 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
USP3-217ENST00000560070 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
USP3-217ENST00000560070 H3BPC8 53 aa3.95□□□□□ -1.78
USP3-217ENST00000560070 USH2AO75445 5202 aa3.94□□□□□ -1.78
USP3-217ENST00000560070 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
USP3-217ENST00000560070 NDUFC1O43677 76 aa3.94□□□□□ -1.78
USP3-217ENST00000560070 A8MUN3 132 aa3.92□□□□□ -1.78
USP3-217ENST00000560070 SMIM20Q8N5G0 67 aa3.92□□□□□ -1.78
USP3-217ENST00000560070 H3BS24 57 aa3.91□□□□□ -1.78
USP3-217ENST00000560070 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
USP3-217ENST00000560070 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
USP3-217ENST00000560070 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
USP3-217ENST00000560070 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
USP3-217ENST00000560070 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
USP3-217ENST00000560070 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
USP3-217ENST00000560070 ACYP2P14621 99 aa3.83□□□□□ -1.8
USP3-217ENST00000560070 H0YAA0 97 aa3.81□□□□□ -1.8
USP3-217ENST00000560070 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
USP3-217ENST00000560070 Q5VV11 94 aa3.81□□□□□ -1.8
USP3-217ENST00000560070 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
USP3-217ENST00000560070 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
USP3-217ENST00000560070 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
USP3-217ENST00000560070 MT1BP07438 61 aa3.79□□□□□ -1.8
USP3-217ENST00000560070 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
USP3-217ENST00000560070 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
USP3-217ENST00000560070 P0C880 135 aa3.78□□□□□ -1.8
USP3-217ENST00000560070 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
USP3-217ENST00000560070 COX7CP15954 63 aa3.76□□□□□ -1.81
USP3-217ENST00000560070 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
USP3-217ENST00000560070 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
USP3-217ENST00000560070 A6NN06 94 aa3.73□□□□□ -1.81
USP3-217ENST00000560070 R4GN34 69 aa3.73□□□□□ -1.81
USP3-217ENST00000560070 M0QZ58 72 aa3.72□□□□□ -1.81
USP3-217ENST00000560070 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
USP3-217ENST00000560070 ANAPC13Q9BS18 74 aa3.71□□□□□ -1.82
USP3-217ENST00000560070 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
USP3-217ENST00000560070 COA5Q86WW8 74 aa3.69□□□□□ -1.82
USP3-217ENST00000560070 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
USP3-217ENST00000560070 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
USP3-217ENST00000560070 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
USP3-217ENST00000560070 H7BZZ5 65 aa3.66□□□□□ -1.82
USP3-217ENST00000560070 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
USP3-217ENST00000560070 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
USP3-217ENST00000560070 SEC61GP60059 68 aa3.59□□□□□ -1.83
USP3-217ENST00000560070 MT1XP80297 61 aa3.58□□□□□ -1.84
USP3-217ENST00000560070 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
USP3-217ENST00000560070 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
USP3-217ENST00000560070 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
USP3-217ENST00000560070 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
USP3-217ENST00000560070 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
USP3-217ENST00000560070 A0A0D9SG42 100 aa3.53□□□□□ -1.84
USP3-217ENST00000560070 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
USP3-217ENST00000560070 A0A1B0GU33 70 aa3.52□□□□□ -1.85
USP3-217ENST00000560070 A0A1B0GU69 56 aa3.5□□□□□ -1.85
USP3-217ENST00000560070 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
USP3-217ENST00000560070 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
USP3-217ENST00000560070 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
USP3-217ENST00000560070 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
USP3-217ENST00000560070 TMEM258P61165 79 aa3.45□□□□□ -1.86
USP3-217ENST00000560070 A8MU10 97 aa3.42□□□□□ -1.86
USP3-217ENST00000560070 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
USP3-217ENST00000560070 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
USP3-217ENST00000560070 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
USP3-217ENST00000560070 KMT2DO14686 5537 aa3.4□□□□□ -1.86
USP3-217ENST00000560070 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
USP3-217ENST00000560070 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
USP3-217ENST00000560070 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
USP3-217ENST00000560070 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.87
USP3-217ENST00000560070 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
USP3-217ENST00000560070 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
USP3-217ENST00000560070 NEBP20929 6669 aa3.38□□□□□ -1.87
USP3-217ENST00000560070 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
USP3-217ENST00000560070 MDN1Q9NU22 5596 aa3.34□□□□□ -1.88
USP3-217ENST00000560070 SPRR2EP22531 72 aa3.33□□□□□ -1.88
USP3-217ENST00000560070 SPRR2BP35325 72 aa3.33□□□□□ -1.88
USP3-217ENST00000560070 SPRR2AP35326 72 aa3.33□□□□□ -1.88
USP3-217ENST00000560070 UQCR11O14957 56 aa3.3□□□□□ -1.88
USP3-217ENST00000560070 KRTAP15-1Q3LI76 137 aa3.3□□□□□ -1.88
USP3-217ENST00000560070 PSPHP1O15172 72 aa3.29□□□□□ -1.88
USP3-217ENST00000560070 PCP4P48539 62 aa3.29□□□□□ -1.88
USP3-217ENST00000560070 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms