RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
RPL28-209ENST00000560055 A8MUN3 132 aa7.86□□□□□ -1.15
RPL28-209ENST00000560055 SMIM20Q8N5G0 67 aa7.86□□□□□ -1.15
RPL28-209ENST00000560055 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
RPL28-209ENST00000560055 LCE2BO14633 110 aa7.85□□□□□ -1.15
RPL28-209ENST00000560055 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
RPL28-209ENST00000560055 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
RPL28-209ENST00000560055 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
RPL28-209ENST00000560055 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
RPL28-209ENST00000560055 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
RPL28-209ENST00000560055 NDUFC1O43677 76 aa7.73□□□□□ -1.17
RPL28-209ENST00000560055 SERP2Q8N6R1 65 aa7.69□□□□□ -1.18
RPL28-209ENST00000560055 SNURFQ9Y675 71 aa7.65□□□□□ -1.18
RPL28-209ENST00000560055 H0YAA0 97 aa7.64□□□□□ -1.19
RPL28-209ENST00000560055 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
RPL28-209ENST00000560055 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
RPL28-209ENST00000560055 ACYP2P14621 99 aa7.56□□□□□ -1.2
RPL28-209ENST00000560055 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
RPL28-209ENST00000560055 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
RPL28-209ENST00000560055 SPANXA2-OT1Q8N9U9 137 aa7.54□□□□□ -1.2
RPL28-209ENST00000560055 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
RPL28-209ENST00000560055 COX7CP15954 63 aa7.52□□□□□ -1.21
RPL28-209ENST00000560055 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
RPL28-209ENST00000560055 MT1BP07438 61 aa7.48□□□□□ -1.21
RPL28-209ENST00000560055 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
RPL28-209ENST00000560055 Q5VV11 94 aa7.45□□□□□ -1.22
RPL28-209ENST00000560055 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
RPL28-209ENST00000560055 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
RPL28-209ENST00000560055 P0C880 135 aa7.42□□□□□ -1.22
RPL28-209ENST00000560055 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
RPL28-209ENST00000560055 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
RPL28-209ENST00000560055 CYSTM1Q9H1C7 97 aa7.4□□□□□ -1.22
RPL28-209ENST00000560055 H7BZZ5 65 aa7.37□□□□□ -1.23
RPL28-209ENST00000560055 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
RPL28-209ENST00000560055 R4GN34 69 aa7.31□□□□□ -1.24
RPL28-209ENST00000560055 COA5Q86WW8 74 aa7.3□□□□□ -1.24
RPL28-209ENST00000560055 M0QZ58 72 aa7.26□□□□□ -1.25
RPL28-209ENST00000560055 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
RPL28-209ENST00000560055 A6NN06 94 aa7.24□□□□□ -1.25
RPL28-209ENST00000560055 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
RPL28-209ENST00000560055 KRTAP10-5P60370 271 aa7.24□□□□□ -1.25
RPL28-209ENST00000560055 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
RPL28-209ENST00000560055 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
RPL28-209ENST00000560055 MT1XP80297 61 aa7.08□□□□□ -1.28
RPL28-209ENST00000560055 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
RPL28-209ENST00000560055 KRTAP13-4Q3LI77 160 aa7.05□□□□□ -1.28
RPL28-209ENST00000560055 SEC61GP60059 68 aa7.03□□□□□ -1.28
RPL28-209ENST00000560055 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
RPL28-209ENST00000560055 SERP1Q9Y6X1 66 aa7.01□□□□□ -1.29
RPL28-209ENST00000560055 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
RPL28-209ENST00000560055 TMEM258P61165 79 aa6.98□□□□□ -1.29
RPL28-209ENST00000560055 NEBP20929 6669 aa6.97□□□□□ -1.29
RPL28-209ENST00000560055 A0A1B0GU33 70 aa6.91□□□□□ -1.3
RPL28-209ENST00000560055 KMT2DO14686 5537 aa6.89□□□□□ -1.31
RPL28-209ENST00000560055 A0A1B0GU69 56 aa6.89□□□□□ -1.31
RPL28-209ENST00000560055 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
RPL28-209ENST00000560055 KRTAP5-9P26371 169 aa6.86□□□□□ -1.31
RPL28-209ENST00000560055 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
RPL28-209ENST00000560055 A0A0D9SG42 100 aa6.81□□□□□ -1.32
RPL28-209ENST00000560055 LINC01558Q9Y6Z2 57 aa6.8□□□□□ -1.32
RPL28-209ENST00000560055 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
RPL28-209ENST00000560055 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
RPL28-209ENST00000560055 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
RPL28-209ENST00000560055 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
RPL28-209ENST00000560055 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
RPL28-209ENST00000560055 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
RPL28-209ENST00000560055 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
RPL28-209ENST00000560055 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
RPL28-209ENST00000560055 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
RPL28-209ENST00000560055 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
RPL28-209ENST00000560055 A8MU10 97 aa6.67□□□□□ -1.34
RPL28-209ENST00000560055 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
RPL28-209ENST00000560055 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
RPL28-209ENST00000560055 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
RPL28-209ENST00000560055 PCP4P48539 62 aa6.59□□□□□ -1.35
RPL28-209ENST00000560055 SPRR2EP22531 72 aa6.58□□□□□ -1.36
RPL28-209ENST00000560055 SPRR2BP35325 72 aa6.58□□□□□ -1.36
RPL28-209ENST00000560055 SPRR2AP35326 72 aa6.58□□□□□ -1.36
RPL28-209ENST00000560055 UQCR11O14957 56 aa6.56□□□□□ -1.36
RPL28-209ENST00000560055 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
RPL28-209ENST00000560055 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
RPL28-209ENST00000560055 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
RPL28-209ENST00000560055 Q1T7F1 81 aa6.53□□□□□ -1.36
RPL28-209ENST00000560055 V9GYY9 64 aa6.53□□□□□ -1.36
RPL28-209ENST00000560055 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
RPL28-209ENST00000560055 PSPHP1O15172 72 aa6.45□□□□□ -1.38
RPL28-209ENST00000560055 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
RPL28-209ENST00000560055 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
RPL28-209ENST00000560055 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
RPL28-209ENST00000560055 SPRR2DP22532 72 aa6.36□□□□□ -1.39
RPL28-209ENST00000560055 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
RPL28-209ENST00000560055 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
RPL28-209ENST00000560055 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
RPL28-209ENST00000560055 TNP1P09430 55 aa6.31□□□□□ -1.4
RPL28-209ENST00000560055 MT1EP04732 61 aa6.26□□□□□ -1.41
RPL28-209ENST00000560055 A6NED7 52 aa6.24□□□□□ -1.41
RPL28-209ENST00000560055 K7ERS5 55 aa6.22□□□□□ -1.41
RPL28-209ENST00000560055 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
RPL28-209ENST00000560055 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
RPL28-209ENST00000560055 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms