RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ATP5EP56381 51 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-225ENST00000560005 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
PSEN1-225ENST00000560005 SYNE2Q8WXH0 6885 aaKnown RBP10.57□□□□□ -0.72
PSEN1-225ENST00000560005 KRTAP9-8Q9BYQ0 159 aa10.55□□□□□ -0.72
PSEN1-225ENST00000560005 MACF1Q9UPN3 7388 aaKnown RBP10.55□□□□□ -0.72
PSEN1-225ENST00000560005 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
PSEN1-225ENST00000560005 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
PSEN1-225ENST00000560005 SPINK7P58062 85 aa10.53□□□□□ -0.72
PSEN1-225ENST00000560005 HRES1P13985 223 aa10.47□□□□□ -0.73
PSEN1-225ENST00000560005 KRTAP19-1Q8IUB9 90 aa10.47□□□□□ -0.73
PSEN1-225ENST00000560005 A8MUN3 132 aa10.36□□□□□ -0.75
PSEN1-225ENST00000560005 LCE2BO14633 110 aa10.36□□□□□ -0.75
PSEN1-225ENST00000560005 MT2AP02795 61 aa10.34□□□□□ -0.75
PSEN1-225ENST00000560005 ACYP2P14621 99 aa10.34□□□□□ -0.75
PSEN1-225ENST00000560005 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
PSEN1-225ENST00000560005 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
PSEN1-225ENST00000560005 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
PSEN1-225ENST00000560005 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
PSEN1-225ENST00000560005 MT1FP04733 61 aa10.27□□□□□ -0.77
PSEN1-225ENST00000560005 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
PSEN1-225ENST00000560005 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
PSEN1-225ENST00000560005 COA5Q86WW8 74 aa10.19□□□□□ -0.78
PSEN1-225ENST00000560005 KRTAP10-10P60014 251 aa10.18□□□□□ -0.78
PSEN1-225ENST00000560005 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
PSEN1-225ENST00000560005 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.78
PSEN1-225ENST00000560005 KRTAP3-1Q9BYR8 98 aa10.12□□□□□ -0.79
PSEN1-225ENST00000560005 KRTAP19-6Q3LI70 58 aa10.09□□□□□ -0.79
PSEN1-225ENST00000560005 SMIM26A0A096LP01 95 aa10.08□□□□□ -0.8
PSEN1-225ENST00000560005 H1FX-AS1Q4G0G2 97 aa10.08□□□□□ -0.8
PSEN1-225ENST00000560005 SPTSSBQ8NFR3 76 aa10.08□□□□□ -0.8
PSEN1-225ENST00000560005 KRTAP6-3Q3LI67 103 aa10.04□□□□□ -0.8
PSEN1-225ENST00000560005 NEBP20929 6669 aa9.97□□□□□ -0.81
PSEN1-225ENST00000560005 S4R3F8 94 aa9.96□□□□□ -0.82
PSEN1-225ENST00000560005 V9GYY9 64 aa9.96□□□□□ -0.82
PSEN1-225ENST00000560005 Q1T7F1 81 aa9.88□□□□□ -0.83
PSEN1-225ENST00000560005 LCA10Q71F78 164 aa9.85□□□□□ -0.83
PSEN1-225ENST00000560005 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
PSEN1-225ENST00000560005 CSAG1Q6PB30 78 aa9.81□□□□□ -0.84
PSEN1-225ENST00000560005 MUC12Q9UKN1 5478 aa9.79□□□□□ -0.84
PSEN1-225ENST00000560005 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
PSEN1-225ENST00000560005 SEC61GP60059 68 aa9.76□□□□□ -0.85
PSEN1-225ENST00000560005 PRR15LQ9BU68 103 aa9.76□□□□□ -0.85
PSEN1-225ENST00000560005 A0A1B0GU69 56 aa9.7□□□□□ -0.86
PSEN1-225ENST00000560005 KRTAP20-1Q3LI63 56 aa9.65□□□□□ -0.86
PSEN1-225ENST00000560005 PSPHP1O15172 72 aa9.61□□□□□ -0.87
PSEN1-225ENST00000560005 H0YAA0 97 aa9.59□□□□□ -0.87
PSEN1-225ENST00000560005 Q5VV11 94 aa9.53□□□□□ -0.88
PSEN1-225ENST00000560005 ADM2Q7Z4H4 148 aa9.47□□□□□ -0.89
PSEN1-225ENST00000560005 A0A1B0GU33 70 aa9.43□□□□□ -0.9
PSEN1-225ENST00000560005 UQCR11O14957 56 aa9.42□□□□□ -0.9
PSEN1-225ENST00000560005 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
PSEN1-225ENST00000560005 MDN1Q9NU22 5596 aa9.42□□□□□ -0.9
PSEN1-225ENST00000560005 A6NED7 52 aa9.4□□□□□ -0.9
PSEN1-225ENST00000560005 A6NN06 94 aa9.4□□□□□ -0.9
PSEN1-225ENST00000560005 KMT2DO14686 5537 aa9.37□□□□□ -0.91
PSEN1-225ENST00000560005 P0C880 135 aa9.33□□□□□ -0.92
PSEN1-225ENST00000560005 KRTAP5-9P26371 169 aa9.3□□□□□ -0.92
PSEN1-225ENST00000560005 M0QZ58 72 aa9.28□□□□□ -0.92
PSEN1-225ENST00000560005 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
PSEN1-225ENST00000560005 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
PSEN1-225ENST00000560005 SPATA8Q6RVD6 105 aa9.25□□□□□ -0.93
PSEN1-225ENST00000560005 MT1BP07438 61 aa9.23□□□□□ -0.93
PSEN1-225ENST00000560005 CDC42SE1Q9NRR8 79 aa9.23□□□□□ -0.93
PSEN1-225ENST00000560005 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
PSEN1-225ENST00000560005 R4GN34 69 aa9.2□□□□□ -0.94
PSEN1-225ENST00000560005 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
PSEN1-225ENST00000560005 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
PSEN1-225ENST00000560005 KRTAP10-5P60370 271 aa9.15□□□□□ -0.94
PSEN1-225ENST00000560005 KRTAP19-8Q3LI54 63 aa9.08□□□□□ -0.96
PSEN1-225ENST00000560005 KRTAP13-4Q3LI77 160 aa9.08□□□□□ -0.96
PSEN1-225ENST00000560005 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.97
PSEN1-225ENST00000560005 PRO0628Q9UI54 55 aa9.01□□□□□ -0.97
PSEN1-225ENST00000560005 K7ERS5 55 aa9□□□□□ -0.97
PSEN1-225ENST00000560005 A8MU10 97 aa8.98□□□□□ -0.97
PSEN1-225ENST00000560005 A0A0D9SG42 100 aa8.97□□□□□ -0.97
PSEN1-225ENST00000560005 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
PSEN1-225ENST00000560005 SPRR2EP22531 72 aa8.92□□□□□ -0.98
PSEN1-225ENST00000560005 SPRR2BP35325 72 aa8.92□□□□□ -0.98
PSEN1-225ENST00000560005 SPRR2AP35326 72 aa8.92□□□□□ -0.98
PSEN1-225ENST00000560005 SPRR2FQ96RM1 72 aa8.89□□□□□ -0.99
PSEN1-225ENST00000560005 KRTAP2-2Q9BYT5 123 aa8.86□□□□□ -0.99
PSEN1-225ENST00000560005 KRTAP2-1Q9BYU5 128 aa8.86□□□□□ -0.99
PSEN1-225ENST00000560005 SPINT4Q6UDR6 99 aa8.83□□□□□ -1
PSEN1-225ENST00000560005 KRTAP12-1P59990 96 aa8.81□□□□□ -1
PSEN1-225ENST00000560005 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
PSEN1-225ENST00000560005 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
PSEN1-225ENST00000560005 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
PSEN1-225ENST00000560005 LCE1AQ5T7P2 110 aa8.7□□□□□ -1.02
PSEN1-225ENST00000560005 SPRR2DP22532 72 aa8.63□□□□□ -1.03
PSEN1-225ENST00000560005 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
PSEN1-225ENST00000560005 KRTAP8-1Q8IUC2 63 aa8.62□□□□□ -1.03
PSEN1-225ENST00000560005 GPR98Q8WXG9 6306 aa8.62□□□□□ -1.03
PSEN1-225ENST00000560005 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
PSEN1-225ENST00000560005 ROMO1P60602 79 aa8.5□□□□□ -1.05
PSEN1-225ENST00000560005 MT1XP80297 61 aa8.48□□□□□ -1.05
PSEN1-225ENST00000560005 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
PSEN1-225ENST00000560005 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
PSEN1-225ENST00000560005 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
PSEN1-225ENST00000560005 KTN1-AS1Q86SY8 53 aa8.34□□□□□ -1.07
PSEN1-225ENST00000560005 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms