RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 A8MUN3 132 aa5.17□□□□□ -1.58
TPM1-221ENST00000559831 S4R3F8 94 aa5.14□□□□□ -1.59
TPM1-221ENST00000559831 ACYP2P14621 99 aa5.13□□□□□ -1.59
TPM1-221ENST00000559831 MT1HP80294 61 aa5.12□□□□□ -1.59
TPM1-221ENST00000559831 TMEM258P61165 79 aa5.11□□□□□ -1.59
TPM1-221ENST00000559831 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
TPM1-221ENST00000559831 M0R2T5 61 aa5.1□□□□□ -1.59
TPM1-221ENST00000559831 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
TPM1-221ENST00000559831 LCA10Q71F78 164 aa5.09□□□□□ -1.59
TPM1-221ENST00000559831 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
TPM1-221ENST00000559831 CHKB-CPT1BH3BT56 60 aa5.07□□□□□ -1.6
TPM1-221ENST00000559831 COA5Q86WW8 74 aa5.06□□□□□ -1.6
TPM1-221ENST00000559831 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
TPM1-221ENST00000559831 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
TPM1-221ENST00000559831 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
TPM1-221ENST00000559831 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
TPM1-221ENST00000559831 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
TPM1-221ENST00000559831 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
TPM1-221ENST00000559831 MT2AP02795 61 aa4.88□□□□□ -1.63
TPM1-221ENST00000559831 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
TPM1-221ENST00000559831 H0YAA0 97 aa4.86□□□□□ -1.63
TPM1-221ENST00000559831 MT1FP04733 61 aa4.85□□□□□ -1.63
TPM1-221ENST00000559831 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
TPM1-221ENST00000559831 SEC61GP60059 68 aa4.83□□□□□ -1.64
TPM1-221ENST00000559831 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
TPM1-221ENST00000559831 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
TPM1-221ENST00000559831 P0C880 135 aa4.81□□□□□ -1.64
TPM1-221ENST00000559831 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
TPM1-221ENST00000559831 A0A1B0GU69 56 aa4.79□□□□□ -1.64
TPM1-221ENST00000559831 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
TPM1-221ENST00000559831 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
TPM1-221ENST00000559831 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
TPM1-221ENST00000559831 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
TPM1-221ENST00000559831 V9GYY9 64 aa4.74□□□□□ -1.65
TPM1-221ENST00000559831 Q1T7F1 81 aa4.73□□□□□ -1.65
TPM1-221ENST00000559831 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
TPM1-221ENST00000559831 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
TPM1-221ENST00000559831 R4GN34 69 aa4.72□□□□□ -1.65
TPM1-221ENST00000559831 M0QZ58 72 aa4.71□□□□□ -1.66
TPM1-221ENST00000559831 A0A1B0GU33 70 aa4.7□□□□□ -1.66
TPM1-221ENST00000559831 PSPHP1O15172 72 aa4.7□□□□□ -1.66
TPM1-221ENST00000559831 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
TPM1-221ENST00000559831 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
TPM1-221ENST00000559831 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
TPM1-221ENST00000559831 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
TPM1-221ENST00000559831 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
TPM1-221ENST00000559831 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
TPM1-221ENST00000559831 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
TPM1-221ENST00000559831 Q5VV11 94 aa4.63□□□□□ -1.67
TPM1-221ENST00000559831 A0A0D9SG42 100 aa4.59□□□□□ -1.67
TPM1-221ENST00000559831 UQCR11O14957 56 aa4.59□□□□□ -1.67
TPM1-221ENST00000559831 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
TPM1-221ENST00000559831 A6NED7 52 aa4.56□□□□□ -1.68
TPM1-221ENST00000559831 A8MU10 97 aa4.55□□□□□ -1.68
TPM1-221ENST00000559831 MT1BP07438 61 aa4.54□□□□□ -1.68
TPM1-221ENST00000559831 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
TPM1-221ENST00000559831 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
TPM1-221ENST00000559831 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
TPM1-221ENST00000559831 A6NN06 94 aa4.49□□□□□ -1.69
TPM1-221ENST00000559831 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
TPM1-221ENST00000559831 USH2AO75445 5202 aa4.46□□□□□ -1.69
TPM1-221ENST00000559831 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
TPM1-221ENST00000559831 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
TPM1-221ENST00000559831 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
TPM1-221ENST00000559831 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
TPM1-221ENST00000559831 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
TPM1-221ENST00000559831 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
TPM1-221ENST00000559831 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
TPM1-221ENST00000559831 K7ERS5 55 aa4.39□□□□□ -1.71
TPM1-221ENST00000559831 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
TPM1-221ENST00000559831 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
TPM1-221ENST00000559831 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
TPM1-221ENST00000559831 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
TPM1-221ENST00000559831 MT1XP80297 61 aa4.35□□□□□ -1.71
TPM1-221ENST00000559831 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
TPM1-221ENST00000559831 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
TPM1-221ENST00000559831 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
TPM1-221ENST00000559831 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
TPM1-221ENST00000559831 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
TPM1-221ENST00000559831 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
TPM1-221ENST00000559831 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
TPM1-221ENST00000559831 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
TPM1-221ENST00000559831 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
TPM1-221ENST00000559831 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
TPM1-221ENST00000559831 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
TPM1-221ENST00000559831 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
TPM1-221ENST00000559831 ROMO1P60602 79 aa4.16□□□□□ -1.74
TPM1-221ENST00000559831 TNP1P09430 55 aa4.15□□□□□ -1.75
TPM1-221ENST00000559831 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
TPM1-221ENST00000559831 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
TPM1-221ENST00000559831 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
TPM1-221ENST00000559831 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
TPM1-221ENST00000559831 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
TPM1-221ENST00000559831 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
TPM1-221ENST00000559831 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
TPM1-221ENST00000559831 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TPM1-221ENST00000559831 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
TPM1-221ENST00000559831 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
TPM1-221ENST00000559831 KMT2DO14686 5537 aa3.98□□□□□ -1.77
TPM1-221ENST00000559831 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms