RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
HMG20A-209ENST00000559728 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
HMG20A-209ENST00000559728 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
HMG20A-209ENST00000559728 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
HMG20A-209ENST00000559728 H0Y9P7 68 aa4.42□□□□□ -1.7
HMG20A-209ENST00000559728 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
HMG20A-209ENST00000559728 M0R2T5 61 aa4.4□□□□□ -1.71
HMG20A-209ENST00000559728 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
HMG20A-209ENST00000559728 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
HMG20A-209ENST00000559728 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
HMG20A-209ENST00000559728 ATOX1O00244 68 aa4.39□□□□□ -1.71
HMG20A-209ENST00000559728 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
HMG20A-209ENST00000559728 KLKP1Q107X0 134 aa4.38□□□□□ -1.71
HMG20A-209ENST00000559728 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
HMG20A-209ENST00000559728 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
HMG20A-209ENST00000559728 C1orf64Q8NEQ6 169 aa4.37□□□□□ -1.71
HMG20A-209ENST00000559728 LINC00208Q96KT6 92 aa4.37□□□□□ -1.71
HMG20A-209ENST00000559728 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
HMG20A-209ENST00000559728 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
HMG20A-209ENST00000559728 MT2AP02795 61 aa4.34□□□□□ -1.71
HMG20A-209ENST00000559728 MP68P56378 58 aa4.34□□□□□ -1.71
HMG20A-209ENST00000559728 H3BPC8 53 aa4.33□□□□□ -1.72
HMG20A-209ENST00000559728 MT1FP04733 61 aa4.32□□□□□ -1.72
HMG20A-209ENST00000559728 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
HMG20A-209ENST00000559728 LCA10Q71F78 164 aa4.29□□□□□ -1.72
HMG20A-209ENST00000559728 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
HMG20A-209ENST00000559728 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
HMG20A-209ENST00000559728 S4R3F8 94 aa4.27□□□□□ -1.73
HMG20A-209ENST00000559728 USH2AO75445 5202 aa4.24□□□□□ -1.73
HMG20A-209ENST00000559728 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
HMG20A-209ENST00000559728 A8MUN3 132 aa4.24□□□□□ -1.73
HMG20A-209ENST00000559728 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
HMG20A-209ENST00000559728 DMAC1Q96GE9 116 aa4.23□□□□□ -1.73
HMG20A-209ENST00000559728 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
HMG20A-209ENST00000559728 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
HMG20A-209ENST00000559728 COX7CP15954 63 aa4.2□□□□□ -1.74
HMG20A-209ENST00000559728 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
HMG20A-209ENST00000559728 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
HMG20A-209ENST00000559728 CYSTM1Q9H1C7 97 aa4.19□□□□□ -1.74
HMG20A-209ENST00000559728 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
HMG20A-209ENST00000559728 NDUFC1O43677 76 aa4.15□□□□□ -1.75
HMG20A-209ENST00000559728 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
HMG20A-209ENST00000559728 H0YAA0 97 aa4.12□□□□□ -1.75
HMG20A-209ENST00000559728 H7BZZ5 65 aa4.12□□□□□ -1.75
HMG20A-209ENST00000559728 ANAPC13Q9BS18 74 aa4.12□□□□□ -1.75
HMG20A-209ENST00000559728 ACYP2P14621 99 aa4.11□□□□□ -1.75
HMG20A-209ENST00000559728 CCDC179H3BU77 68 aa4.1□□□□□ -1.75
HMG20A-209ENST00000559728 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
HMG20A-209ENST00000559728 P0C880 135 aa4.05□□□□□ -1.76
HMG20A-209ENST00000559728 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
HMG20A-209ENST00000559728 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
HMG20A-209ENST00000559728 MT1BP07438 61 aa4.03□□□□□ -1.76
HMG20A-209ENST00000559728 COA5Q86WW8 74 aa4.02□□□□□ -1.77
HMG20A-209ENST00000559728 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
HMG20A-209ENST00000559728 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
HMG20A-209ENST00000559728 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
HMG20A-209ENST00000559728 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
HMG20A-209ENST00000559728 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
HMG20A-209ENST00000559728 Q5VV11 94 aa3.94□□□□□ -1.78
HMG20A-209ENST00000559728 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
HMG20A-209ENST00000559728 M0QZ58 72 aa3.9□□□□□ -1.79
HMG20A-209ENST00000559728 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
HMG20A-209ENST00000559728 TMEM258P61165 79 aa3.9□□□□□ -1.79
HMG20A-209ENST00000559728 R4GN34 69 aa3.9□□□□□ -1.79
HMG20A-209ENST00000559728 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
HMG20A-209ENST00000559728 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
HMG20A-209ENST00000559728 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
HMG20A-209ENST00000559728 MT1XP80297 61 aa3.82□□□□□ -1.8
HMG20A-209ENST00000559728 MT3P25713 68 aa3.81□□□□□ -1.8
HMG20A-209ENST00000559728 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
HMG20A-209ENST00000559728 A6NN06 94 aa3.8□□□□□ -1.8
HMG20A-209ENST00000559728 SERP1Q9Y6X1 66 aa3.79□□□□□ -1.8
HMG20A-209ENST00000559728 SEC61GP60059 68 aa3.78□□□□□ -1.8
HMG20A-209ENST00000559728 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
HMG20A-209ENST00000559728 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
HMG20A-209ENST00000559728 A0A1B0GU33 70 aa3.77□□□□□ -1.81
HMG20A-209ENST00000559728 A0A1B0GU69 56 aa3.77□□□□□ -1.81
HMG20A-209ENST00000559728 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
HMG20A-209ENST00000559728 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
HMG20A-209ENST00000559728 A0A0D9SG42 100 aa3.7□□□□□ -1.82
HMG20A-209ENST00000559728 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
HMG20A-209ENST00000559728 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
HMG20A-209ENST00000559728 A8MU10 97 aa3.68□□□□□ -1.82
HMG20A-209ENST00000559728 KMT2DO14686 5537 aa3.67□□□□□ -1.82
HMG20A-209ENST00000559728 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
HMG20A-209ENST00000559728 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
HMG20A-209ENST00000559728 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
HMG20A-209ENST00000559728 Q1T7F1 81 aa3.66□□□□□ -1.82
HMG20A-209ENST00000559728 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
HMG20A-209ENST00000559728 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
HMG20A-209ENST00000559728 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
HMG20A-209ENST00000559728 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
HMG20A-209ENST00000559728 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
HMG20A-209ENST00000559728 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
HMG20A-209ENST00000559728 V9GYY9 64 aa3.61□□□□□ -1.83
HMG20A-209ENST00000559728 UQCR11O14957 56 aa3.6□□□□□ -1.83
HMG20A-209ENST00000559728 PSPHP1O15172 72 aa3.6□□□□□ -1.83
HMG20A-209ENST00000559728 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
HMG20A-209ENST00000559728 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.84
HMG20A-209ENST00000559728 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms