RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
PSEN1-224ENST00000559361 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
PSEN1-224ENST00000559361 MT2AP02795 61 aa8.33□□□□□ -1.08
PSEN1-224ENST00000559361 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
PSEN1-224ENST00000559361 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
PSEN1-224ENST00000559361 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
PSEN1-224ENST00000559361 MT1FP04733 61 aa8.27□□□□□ -1.09
PSEN1-224ENST00000559361 A8MUN3 132 aa8.24□□□□□ -1.09
PSEN1-224ENST00000559361 COX7CP15954 63 aa8.24□□□□□ -1.09
PSEN1-224ENST00000559361 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
PSEN1-224ENST00000559361 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
PSEN1-224ENST00000559361 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.1
PSEN1-224ENST00000559361 KRTAP3-1Q9BYR8 98 aa8.19□□□□□ -1.1
PSEN1-224ENST00000559361 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
PSEN1-224ENST00000559361 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
PSEN1-224ENST00000559361 KRTAP19-6Q3LI70 58 aa8.17□□□□□ -1.1
PSEN1-224ENST00000559361 NDUFC1O43677 76 aa8.13□□□□□ -1.11
PSEN1-224ENST00000559361 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
PSEN1-224ENST00000559361 KRTAP6-3Q3LI67 103 aa8.11□□□□□ -1.11
PSEN1-224ENST00000559361 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
PSEN1-224ENST00000559361 S4R3F8 94 aa8.11□□□□□ -1.11
PSEN1-224ENST00000559361 LCA10Q71F78 164 aa8.04□□□□□ -1.12
PSEN1-224ENST00000559361 ACYP2P14621 99 aa8.02□□□□□ -1.13
PSEN1-224ENST00000559361 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
PSEN1-224ENST00000559361 H7BZZ5 65 aa7.99□□□□□ -1.13
PSEN1-224ENST00000559361 CCDC179H3BU77 68 aa7.96□□□□□ -1.14
PSEN1-224ENST00000559361 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
PSEN1-224ENST00000559361 SPTSSBQ8NFR3 76 aa7.89□□□□□ -1.15
PSEN1-224ENST00000559361 NEBP20929 6669 aa7.88□□□□□ -1.15
PSEN1-224ENST00000559361 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
PSEN1-224ENST00000559361 ATP5EP56381 51 aaPredicted RBP7.86□□□□□ -1.15
PSEN1-224ENST00000559361 MUC12Q9UKN1 5478 aa7.83□□□□□ -1.16
PSEN1-224ENST00000559361 H0YAA0 97 aa7.83□□□□□ -1.16
PSEN1-224ENST00000559361 TMEM258P61165 79 aa7.8□□□□□ -1.16
PSEN1-224ENST00000559361 COA5Q86WW8 74 aa7.79□□□□□ -1.16
PSEN1-224ENST00000559361 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
PSEN1-224ENST00000559361 PCP4P48539 62 aa7.69□□□□□ -1.18
PSEN1-224ENST00000559361 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
PSEN1-224ENST00000559361 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
PSEN1-224ENST00000559361 MDN1Q9NU22 5596 aa7.56□□□□□ -1.2
PSEN1-224ENST00000559361 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
PSEN1-224ENST00000559361 KRTAP5-9P26371 169 aa7.54□□□□□ -1.2
PSEN1-224ENST00000559361 SEC61GP60059 68 aa7.54□□□□□ -1.2
PSEN1-224ENST00000559361 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
PSEN1-224ENST00000559361 KMT2DO14686 5537 aa7.54□□□□□ -1.2
PSEN1-224ENST00000559361 A6NN06 94 aa7.53□□□□□ -1.2
PSEN1-224ENST00000559361 P0C880 135 aa7.52□□□□□ -1.21
PSEN1-224ENST00000559361 R4GN34 69 aa7.48□□□□□ -1.21
PSEN1-224ENST00000559361 MT1BP07438 61 aa7.46□□□□□ -1.22
PSEN1-224ENST00000559361 M0QZ58 72 aa7.42□□□□□ -1.22
PSEN1-224ENST00000559361 A0A1B0GU69 56 aa7.41□□□□□ -1.22
PSEN1-224ENST00000559361 KRTAP2-3P0C7H8 128 aa7.41□□□□□ -1.22
PSEN1-224ENST00000559361 KRTAP2-4Q9BYR9 128 aa7.41□□□□□ -1.22
PSEN1-224ENST00000559361 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
PSEN1-224ENST00000559361 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
PSEN1-224ENST00000559361 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
PSEN1-224ENST00000559361 Q5VV11 94 aa7.37□□□□□ -1.23
PSEN1-224ENST00000559361 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
PSEN1-224ENST00000559361 RPS28P62857 69 aaKnown RBP7.34□□□□□ -1.23
PSEN1-224ENST00000559361 V9GYY9 64 aa7.33□□□□□ -1.24
PSEN1-224ENST00000559361 A0A1B0GU33 70 aa7.31□□□□□ -1.24
PSEN1-224ENST00000559361 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
PSEN1-224ENST00000559361 Q1T7F1 81 aa7.24□□□□□ -1.25
PSEN1-224ENST00000559361 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
PSEN1-224ENST00000559361 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
PSEN1-224ENST00000559361 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
PSEN1-224ENST00000559361 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
PSEN1-224ENST00000559361 KRTAP2-2Q9BYT5 123 aa7.14□□□□□ -1.27
PSEN1-224ENST00000559361 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
PSEN1-224ENST00000559361 UQCR11O14957 56 aa7.13□□□□□ -1.27
PSEN1-224ENST00000559361 SPRR2EP22531 72 aa7.13□□□□□ -1.27
PSEN1-224ENST00000559361 SPRR2BP35325 72 aa7.13□□□□□ -1.27
PSEN1-224ENST00000559361 SPRR2AP35326 72 aa7.13□□□□□ -1.27
PSEN1-224ENST00000559361 SPRR2FQ96RM1 72 aa7.11□□□□□ -1.27
PSEN1-224ENST00000559361 PSPHP1O15172 72 aa7.07□□□□□ -1.28
PSEN1-224ENST00000559361 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
PSEN1-224ENST00000559361 A0A0D9SG42 100 aa7.06□□□□□ -1.28
PSEN1-224ENST00000559361 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
PSEN1-224ENST00000559361 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
PSEN1-224ENST00000559361 A8MU10 97 aa6.96□□□□□ -1.3
PSEN1-224ENST00000559361 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
PSEN1-224ENST00000559361 MT1XP80297 61 aa6.95□□□□□ -1.3
PSEN1-224ENST00000559361 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
PSEN1-224ENST00000559361 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
PSEN1-224ENST00000559361 A6NED7 52 aa6.91□□□□□ -1.3
PSEN1-224ENST00000559361 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
PSEN1-224ENST00000559361 SPRR2DP22532 72 aa6.9□□□□□ -1.3
PSEN1-224ENST00000559361 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
PSEN1-224ENST00000559361 K7ERS5 55 aa6.83□□□□□ -1.32
PSEN1-224ENST00000559361 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
PSEN1-224ENST00000559361 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
PSEN1-224ENST00000559361 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
PSEN1-224ENST00000559361 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
PSEN1-224ENST00000559361 GPR98Q8WXG9 6306 aa6.7□□□□□ -1.34
PSEN1-224ENST00000559361 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
PSEN1-224ENST00000559361 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
PSEN1-224ENST00000559361 H3BS24 57 aa6.6□□□□□ -1.35
PSEN1-224ENST00000559361 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
PSEN1-224ENST00000559361 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
PSEN1-224ENST00000559361 TNP1P09430 55 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms