RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
TPM1-217ENST00000559108 LCE2BO14633 110 aa5.08□□□□□ -1.6
TPM1-217ENST00000559108 C20orf197Q8N268 126 aa5.07□□□□□ -1.6
TPM1-217ENST00000559108 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
TPM1-217ENST00000559108 A8MUN3 132 aa5.05□□□□□ -1.6
TPM1-217ENST00000559108 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
TPM1-217ENST00000559108 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
TPM1-217ENST00000559108 COX7CP15954 63 aa5.01□□□□□ -1.61
TPM1-217ENST00000559108 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
TPM1-217ENST00000559108 USH2AO75445 5202 aa5□□□□□ -1.61
TPM1-217ENST00000559108 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
TPM1-217ENST00000559108 NDUFC1O43677 76 aa4.97□□□□□ -1.61
TPM1-217ENST00000559108 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
TPM1-217ENST00000559108 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
TPM1-217ENST00000559108 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
TPM1-217ENST00000559108 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
TPM1-217ENST00000559108 H7BZZ5 65 aa4.93□□□□□ -1.62
TPM1-217ENST00000559108 ANAPC13Q9BS18 74 aa4.93□□□□□ -1.62
TPM1-217ENST00000559108 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
TPM1-217ENST00000559108 H0YAA0 97 aa4.91□□□□□ -1.62
TPM1-217ENST00000559108 ACYP2P14621 99 aa4.9□□□□□ -1.63
TPM1-217ENST00000559108 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
TPM1-217ENST00000559108 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
TPM1-217ENST00000559108 P0C880 135 aa4.88□□□□□ -1.63
TPM1-217ENST00000559108 MT1BP07438 61 aa4.87□□□□□ -1.63
TPM1-217ENST00000559108 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
TPM1-217ENST00000559108 COA5Q86WW8 74 aa4.83□□□□□ -1.64
TPM1-217ENST00000559108 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
TPM1-217ENST00000559108 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
TPM1-217ENST00000559108 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
TPM1-217ENST00000559108 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
TPM1-217ENST00000559108 Q5VV11 94 aa4.75□□□□□ -1.65
TPM1-217ENST00000559108 SPTSSBQ8NFR3 76 aa4.74□□□□□ -1.65
TPM1-217ENST00000559108 M0QZ58 72 aa4.71□□□□□ -1.66
TPM1-217ENST00000559108 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
TPM1-217ENST00000559108 R4GN34 69 aa4.68□□□□□ -1.66
TPM1-217ENST00000559108 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
TPM1-217ENST00000559108 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
TPM1-217ENST00000559108 TMEM258P61165 79 aa4.65□□□□□ -1.67
TPM1-217ENST00000559108 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
TPM1-217ENST00000559108 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
TPM1-217ENST00000559108 MT1XP80297 61 aa4.61□□□□□ -1.67
TPM1-217ENST00000559108 A6NN06 94 aa4.6□□□□□ -1.67
TPM1-217ENST00000559108 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
TPM1-217ENST00000559108 PCP4P48539 62 aa4.54□□□□□ -1.68
TPM1-217ENST00000559108 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
TPM1-217ENST00000559108 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
TPM1-217ENST00000559108 A0A1B0GU33 70 aa4.52□□□□□ -1.69
TPM1-217ENST00000559108 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
TPM1-217ENST00000559108 A0A1B0GU69 56 aa4.51□□□□□ -1.69
TPM1-217ENST00000559108 SEC61GP60059 68 aa4.51□□□□□ -1.69
TPM1-217ENST00000559108 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
TPM1-217ENST00000559108 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
TPM1-217ENST00000559108 A0A0D9SG42 100 aa4.48□□□□□ -1.69
TPM1-217ENST00000559108 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
TPM1-217ENST00000559108 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
TPM1-217ENST00000559108 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
TPM1-217ENST00000559108 A8MU10 97 aa4.45□□□□□ -1.7
TPM1-217ENST00000559108 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
TPM1-217ENST00000559108 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
TPM1-217ENST00000559108 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
TPM1-217ENST00000559108 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
TPM1-217ENST00000559108 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
TPM1-217ENST00000559108 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
TPM1-217ENST00000559108 KMT2DO14686 5537 aa4.36□□□□□ -1.71
TPM1-217ENST00000559108 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
TPM1-217ENST00000559108 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
TPM1-217ENST00000559108 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
TPM1-217ENST00000559108 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
TPM1-217ENST00000559108 Q1T7F1 81 aa4.35□□□□□ -1.71
TPM1-217ENST00000559108 PSPHP1O15172 72 aa4.34□□□□□ -1.71
TPM1-217ENST00000559108 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
TPM1-217ENST00000559108 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
TPM1-217ENST00000559108 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
TPM1-217ENST00000559108 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
TPM1-217ENST00000559108 UQCR11O14957 56 aa4.28□□□□□ -1.72
TPM1-217ENST00000559108 V9GYY9 64 aa4.26□□□□□ -1.73
TPM1-217ENST00000559108 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
TPM1-217ENST00000559108 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
TPM1-217ENST00000559108 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
TPM1-217ENST00000559108 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
TPM1-217ENST00000559108 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
TPM1-217ENST00000559108 NEBP20929 6669 aa4.18□□□□□ -1.74
TPM1-217ENST00000559108 A6NED7 52 aa4.14□□□□□ -1.75
TPM1-217ENST00000559108 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
TPM1-217ENST00000559108 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
TPM1-217ENST00000559108 SPRR2EP22531 72 aa4.09□□□□□ -1.75
TPM1-217ENST00000559108 SPRR2BP35325 72 aa4.09□□□□□ -1.75
TPM1-217ENST00000559108 SPRR2AP35326 72 aa4.09□□□□□ -1.75
TPM1-217ENST00000559108 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
TPM1-217ENST00000559108 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
TPM1-217ENST00000559108 MT1EP04732 61 aa4.06□□□□□ -1.76
TPM1-217ENST00000559108 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
TPM1-217ENST00000559108 TNP1P09430 55 aa4.05□□□□□ -1.76
TPM1-217ENST00000559108 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
TPM1-217ENST00000559108 K7ERS5 55 aa3.99□□□□□ -1.77
TPM1-217ENST00000559108 SPRR2DP22532 72 aa3.94□□□□□ -1.78
TPM1-217ENST00000559108 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
TPM1-217ENST00000559108 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
TPM1-217ENST00000559108 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms