RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPB-203ENST00000558867 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
CDC42BPB-203ENST00000558867 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
CDC42BPB-203ENST00000558867 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
CDC42BPB-203ENST00000558867 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
CDC42BPB-203ENST00000558867 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
CDC42BPB-203ENST00000558867 MT2AP02795 61 aa8.07□□□□□ -1.12
CDC42BPB-203ENST00000558867 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
CDC42BPB-203ENST00000558867 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
CDC42BPB-203ENST00000558867 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
CDC42BPB-203ENST00000558867 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
CDC42BPB-203ENST00000558867 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
CDC42BPB-203ENST00000558867 LCE2BO14633 110 aa8.02□□□□□ -1.13
CDC42BPB-203ENST00000558867 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
CDC42BPB-203ENST00000558867 HRES1P13985 223 aa8.01□□□□□ -1.13
CDC42BPB-203ENST00000558867 MT1FP04733 61 aa7.99□□□□□ -1.13
CDC42BPB-203ENST00000558867 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
CDC42BPB-203ENST00000558867 DMAC1Q96GE9 116 aa7.96□□□□□ -1.14
CDC42BPB-203ENST00000558867 SPINK7P58062 85 aa7.94□□□□□ -1.14
CDC42BPB-203ENST00000558867 A8MUN3 132 aa7.91□□□□□ -1.14
CDC42BPB-203ENST00000558867 ACYP2P14621 99 aa7.91□□□□□ -1.14
CDC42BPB-203ENST00000558867 SMIM26A0A096LP01 95 aa7.89□□□□□ -1.15
CDC42BPB-203ENST00000558867 COA5Q86WW8 74 aa7.88□□□□□ -1.15
CDC42BPB-203ENST00000558867 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
CDC42BPB-203ENST00000558867 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
CDC42BPB-203ENST00000558867 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
CDC42BPB-203ENST00000558867 KRTAP6-3Q3LI67 103 aa7.79□□□□□ -1.16
CDC42BPB-203ENST00000558867 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
CDC42BPB-203ENST00000558867 Q1T7F1 81 aa7.75□□□□□ -1.17
CDC42BPB-203ENST00000558867 V9GYY9 64 aa7.74□□□□□ -1.17
CDC42BPB-203ENST00000558867 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
CDC42BPB-203ENST00000558867 SPTSSBQ8NFR3 76 aa7.64□□□□□ -1.19
CDC42BPB-203ENST00000558867 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
CDC42BPB-203ENST00000558867 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
CDC42BPB-203ENST00000558867 NEBP20929 6669 aa7.57□□□□□ -1.2
CDC42BPB-203ENST00000558867 S4R3F8 94 aa7.52□□□□□ -1.21
CDC42BPB-203ENST00000558867 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
CDC42BPB-203ENST00000558867 Q5VV11 94 aa7.49□□□□□ -1.21
CDC42BPB-203ENST00000558867 LCA10Q71F78 164 aa7.49□□□□□ -1.21
CDC42BPB-203ENST00000558867 PRR15LQ9BU68 103 aa7.49□□□□□ -1.21
CDC42BPB-203ENST00000558867 PSPHP1O15172 72 aa7.47□□□□□ -1.21
CDC42BPB-203ENST00000558867 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
CDC42BPB-203ENST00000558867 A0A1B0GU69 56 aa7.44□□□□□ -1.22
CDC42BPB-203ENST00000558867 KRTAP20-1Q3LI63 56 aa7.44□□□□□ -1.22
CDC42BPB-203ENST00000558867 A6NN06 94 aa7.42□□□□□ -1.22
CDC42BPB-203ENST00000558867 SEC61GP60059 68 aa7.4□□□□□ -1.22
CDC42BPB-203ENST00000558867 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
CDC42BPB-203ENST00000558867 H0YAA0 97 aa7.31□□□□□ -1.24
CDC42BPB-203ENST00000558867 A6NED7 52 aa7.28□□□□□ -1.24
CDC42BPB-203ENST00000558867 UQCR11O14957 56 aa7.27□□□□□ -1.25
CDC42BPB-203ENST00000558867 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
CDC42BPB-203ENST00000558867 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
CDC42BPB-203ENST00000558867 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
CDC42BPB-203ENST00000558867 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
CDC42BPB-203ENST00000558867 KRTAP5-9P26371 169 aa7.22□□□□□ -1.25
CDC42BPB-203ENST00000558867 A0A1B0GU33 70 aa7.21□□□□□ -1.26
CDC42BPB-203ENST00000558867 MT1BP07438 61 aa7.21□□□□□ -1.26
CDC42BPB-203ENST00000558867 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
CDC42BPB-203ENST00000558867 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
CDC42BPB-203ENST00000558867 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
CDC42BPB-203ENST00000558867 KMT2DO14686 5537 aa7.19□□□□□ -1.26
CDC42BPB-203ENST00000558867 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
CDC42BPB-203ENST00000558867 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
CDC42BPB-203ENST00000558867 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
CDC42BPB-203ENST00000558867 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
CDC42BPB-203ENST00000558867 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
CDC42BPB-203ENST00000558867 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
CDC42BPB-203ENST00000558867 P0C880 135 aa7.13□□□□□ -1.27
CDC42BPB-203ENST00000558867 A8MU10 97 aa7.07□□□□□ -1.28
CDC42BPB-203ENST00000558867 M0QZ58 72 aa7.05□□□□□ -1.28
CDC42BPB-203ENST00000558867 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
CDC42BPB-203ENST00000558867 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
CDC42BPB-203ENST00000558867 SPRR2EP22531 72 aa6.95□□□□□ -1.3
CDC42BPB-203ENST00000558867 SPRR2BP35325 72 aa6.95□□□□□ -1.3
CDC42BPB-203ENST00000558867 SPRR2AP35326 72 aa6.95□□□□□ -1.3
CDC42BPB-203ENST00000558867 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
CDC42BPB-203ENST00000558867 R4GN34 69 aa6.92□□□□□ -1.3
CDC42BPB-203ENST00000558867 KRTAP2-2Q9BYT5 123 aa6.89□□□□□ -1.31
CDC42BPB-203ENST00000558867 KRTAP2-1Q9BYU5 128 aa6.89□□□□□ -1.31
CDC42BPB-203ENST00000558867 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
CDC42BPB-203ENST00000558867 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
CDC42BPB-203ENST00000558867 K7ERS5 55 aa6.85□□□□□ -1.31
CDC42BPB-203ENST00000558867 A0A0D9SG42 100 aa6.81□□□□□ -1.32
CDC42BPB-203ENST00000558867 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
CDC42BPB-203ENST00000558867 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
CDC42BPB-203ENST00000558867 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
CDC42BPB-203ENST00000558867 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
CDC42BPB-203ENST00000558867 SPRR2DP22532 72 aa6.73□□□□□ -1.33
CDC42BPB-203ENST00000558867 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
CDC42BPB-203ENST00000558867 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
CDC42BPB-203ENST00000558867 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
CDC42BPB-203ENST00000558867 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
CDC42BPB-203ENST00000558867 MT1XP80297 61 aa6.66□□□□□ -1.34
CDC42BPB-203ENST00000558867 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
CDC42BPB-203ENST00000558867 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
CDC42BPB-203ENST00000558867 ROMO1P60602 79 aa6.57□□□□□ -1.36
CDC42BPB-203ENST00000558867 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
CDC42BPB-203ENST00000558867 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
CDC42BPB-203ENST00000558867 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
CDC42BPB-203ENST00000558867 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms