RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
CSHL1-208ENST00000558609 H0Y9P7 68 aa7.37□□□□□ -1.23
CSHL1-208ENST00000558609 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
CSHL1-208ENST00000558609 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
CSHL1-208ENST00000558609 CCDC179H3BU77 68 aa7.34□□□□□ -1.23
CSHL1-208ENST00000558609 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
CSHL1-208ENST00000558609 H3BPC8 53 aa7.31□□□□□ -1.24
CSHL1-208ENST00000558609 C4orf26Q17RF5 130 aa7.31□□□□□ -1.24
CSHL1-208ENST00000558609 SNURFQ9Y675 71 aa7.31□□□□□ -1.24
CSHL1-208ENST00000558609 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
CSHL1-208ENST00000558609 LOC101927531A0A1B0GV80 90 aa7.26□□□□□ -1.25
CSHL1-208ENST00000558609 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
CSHL1-208ENST00000558609 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
CSHL1-208ENST00000558609 NDUFC1O43677 76 aa7.22□□□□□ -1.25
CSHL1-208ENST00000558609 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
CSHL1-208ENST00000558609 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
CSHL1-208ENST00000558609 CYP4F30PQ9H0H9 118 aa7.18□□□□□ -1.26
CSHL1-208ENST00000558609 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
CSHL1-208ENST00000558609 S4R3F8 94 aa7.14□□□□□ -1.27
CSHL1-208ENST00000558609 H7BZZ5 65 aa7.12□□□□□ -1.27
CSHL1-208ENST00000558609 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
CSHL1-208ENST00000558609 TMEM258P61165 79 aa7.1□□□□□ -1.27
CSHL1-208ENST00000558609 LCA10Q71F78 164 aa7.1□□□□□ -1.27
CSHL1-208ENST00000558609 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
CSHL1-208ENST00000558609 NEBP20929 6669 aa7.05□□□□□ -1.28
CSHL1-208ENST00000558609 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
CSHL1-208ENST00000558609 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
CSHL1-208ENST00000558609 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
CSHL1-208ENST00000558609 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
CSHL1-208ENST00000558609 MT1BP07438 61 aa6.96□□□□□ -1.3
CSHL1-208ENST00000558609 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
CSHL1-208ENST00000558609 ACYP2P14621 99 aa6.95□□□□□ -1.3
CSHL1-208ENST00000558609 Q5VV11 94 aa6.94□□□□□ -1.3
CSHL1-208ENST00000558609 A8MUN3 132 aa6.92□□□□□ -1.3
CSHL1-208ENST00000558609 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
CSHL1-208ENST00000558609 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
CSHL1-208ENST00000558609 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
CSHL1-208ENST00000558609 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
CSHL1-208ENST00000558609 A6NN06 94 aa6.87□□□□□ -1.31
CSHL1-208ENST00000558609 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
CSHL1-208ENST00000558609 COA5Q86WW8 74 aa6.86□□□□□ -1.31
CSHL1-208ENST00000558609 H0YAA0 97 aa6.82□□□□□ -1.32
CSHL1-208ENST00000558609 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
CSHL1-208ENST00000558609 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
CSHL1-208ENST00000558609 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
CSHL1-208ENST00000558609 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
CSHL1-208ENST00000558609 KMT2DO14686 5537 aa6.74□□□□□ -1.33
CSHL1-208ENST00000558609 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
CSHL1-208ENST00000558609 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
CSHL1-208ENST00000558609 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
CSHL1-208ENST00000558609 V9GYY9 64 aa6.63□□□□□ -1.35
CSHL1-208ENST00000558609 SEC61GP60059 68 aa6.6□□□□□ -1.35
CSHL1-208ENST00000558609 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
CSHL1-208ENST00000558609 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
CSHL1-208ENST00000558609 P0C880 135 aa6.56□□□□□ -1.36
CSHL1-208ENST00000558609 Q1T7F1 81 aa6.56□□□□□ -1.36
CSHL1-208ENST00000558609 A0A1B0GU69 56 aa6.55□□□□□ -1.36
CSHL1-208ENST00000558609 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
CSHL1-208ENST00000558609 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
CSHL1-208ENST00000558609 R4GN34 69 aa6.55□□□□□ -1.36
CSHL1-208ENST00000558609 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
CSHL1-208ENST00000558609 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
CSHL1-208ENST00000558609 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
CSHL1-208ENST00000558609 MT1XP80297 61 aa6.52□□□□□ -1.37
CSHL1-208ENST00000558609 M0QZ58 72 aa6.49□□□□□ -1.37
CSHL1-208ENST00000558609 PSPHP1O15172 72 aa6.49□□□□□ -1.37
CSHL1-208ENST00000558609 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
CSHL1-208ENST00000558609 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
CSHL1-208ENST00000558609 A0A1B0GU33 70 aa6.36□□□□□ -1.39
CSHL1-208ENST00000558609 SPRR2EP22531 72 aa6.36□□□□□ -1.39
CSHL1-208ENST00000558609 SPRR2BP35325 72 aa6.36□□□□□ -1.39
CSHL1-208ENST00000558609 SPRR2AP35326 72 aa6.36□□□□□ -1.39
CSHL1-208ENST00000558609 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
CSHL1-208ENST00000558609 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.39
CSHL1-208ENST00000558609 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
CSHL1-208ENST00000558609 A6NED7 52 aa6.33□□□□□ -1.4
CSHL1-208ENST00000558609 UQCR11O14957 56 aa6.32□□□□□ -1.4
CSHL1-208ENST00000558609 KRTAP8-1Q8IUC2 63 aa6.31□□□□□ -1.4
CSHL1-208ENST00000558609 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
CSHL1-208ENST00000558609 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
CSHL1-208ENST00000558609 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
CSHL1-208ENST00000558609 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
CSHL1-208ENST00000558609 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
CSHL1-208ENST00000558609 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
CSHL1-208ENST00000558609 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
CSHL1-208ENST00000558609 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
CSHL1-208ENST00000558609 SPRR2DP22532 72 aa6.15□□□□□ -1.42
CSHL1-208ENST00000558609 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
CSHL1-208ENST00000558609 A0A0D9SG42 100 aa6.14□□□□□ -1.43
CSHL1-208ENST00000558609 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
CSHL1-208ENST00000558609 A8MU10 97 aa6.1□□□□□ -1.43
CSHL1-208ENST00000558609 GPR98Q8WXG9 6306 aa6.09□□□□□ -1.43
CSHL1-208ENST00000558609 K7ERS5 55 aa6.06□□□□□ -1.44
CSHL1-208ENST00000558609 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CSHL1-208ENST00000558609 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CSHL1-208ENST00000558609 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
CSHL1-208ENST00000558609 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
CSHL1-208ENST00000558609 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
CSHL1-208ENST00000558609 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
CSHL1-208ENST00000558609 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms