RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
TPM1-214ENST00000558544 ATP5EP56381 51 aaPredicted RBP8.4□□□□□ -1.06
TPM1-214ENST00000558544 KRTAP9-8Q9BYQ0 159 aa8.4□□□□□ -1.06
TPM1-214ENST00000558544 S4R3F8 94 aa8.39□□□□□ -1.07
TPM1-214ENST00000558544 MT2AP02795 61 aa8.35□□□□□ -1.07
TPM1-214ENST00000558544 LCA10Q71F78 164 aa8.35□□□□□ -1.07
TPM1-214ENST00000558544 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
TPM1-214ENST00000558544 A8MUN3 132 aa8.3□□□□□ -1.08
TPM1-214ENST00000558544 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
TPM1-214ENST00000558544 MT1FP04733 61 aa8.28□□□□□ -1.08
TPM1-214ENST00000558544 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
TPM1-214ENST00000558544 SERP1Q9Y6X1 66 aa8.25□□□□□ -1.09
TPM1-214ENST00000558544 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
TPM1-214ENST00000558544 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
TPM1-214ENST00000558544 COA5Q86WW8 74 aa8.22□□□□□ -1.09
TPM1-214ENST00000558544 ACYP2P14621 99 aa8.21□□□□□ -1.1
TPM1-214ENST00000558544 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
TPM1-214ENST00000558544 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
TPM1-214ENST00000558544 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
TPM1-214ENST00000558544 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
TPM1-214ENST00000558544 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
TPM1-214ENST00000558544 LCE2BO14633 110 aa8.01□□□□□ -1.13
TPM1-214ENST00000558544 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
TPM1-214ENST00000558544 USH2AO75445 5202 aa7.99□□□□□ -1.13
TPM1-214ENST00000558544 H0YAA0 97 aa7.97□□□□□ -1.13
TPM1-214ENST00000558544 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
TPM1-214ENST00000558544 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
TPM1-214ENST00000558544 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
TPM1-214ENST00000558544 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
TPM1-214ENST00000558544 Q1T7F1 81 aa7.87□□□□□ -1.15
TPM1-214ENST00000558544 SSPOA2VEC9 5147 aa7.86□□□□□ -1.15
TPM1-214ENST00000558544 LINC01558Q9Y6Z2 57 aa7.85□□□□□ -1.15
TPM1-214ENST00000558544 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.15
TPM1-214ENST00000558544 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
TPM1-214ENST00000558544 P0C880 135 aa7.82□□□□□ -1.16
TPM1-214ENST00000558544 V9GYY9 64 aa7.82□□□□□ -1.16
TPM1-214ENST00000558544 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
TPM1-214ENST00000558544 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
TPM1-214ENST00000558544 PSPHP1O15172 72 aa7.74□□□□□ -1.17
TPM1-214ENST00000558544 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
TPM1-214ENST00000558544 A0A1B0GU69 56 aa7.72□□□□□ -1.17
TPM1-214ENST00000558544 Q5VV11 94 aa7.71□□□□□ -1.17
TPM1-214ENST00000558544 MT1BP07438 61 aa7.7□□□□□ -1.18
TPM1-214ENST00000558544 R4GN34 69 aa7.7□□□□□ -1.18
TPM1-214ENST00000558544 M0QZ58 72 aa7.67□□□□□ -1.18
TPM1-214ENST00000558544 SEC61GP60059 68 aa7.66□□□□□ -1.18
TPM1-214ENST00000558544 KRTAP19-6Q3LI70 58 aa7.65□□□□□ -1.18
TPM1-214ENST00000558544 FCGBPQ9Y6R7 5405 aaPredicted RBP7.58□□□□□ -1.2
TPM1-214ENST00000558544 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
TPM1-214ENST00000558544 A0A1B0GU33 70 aa7.52□□□□□ -1.21
TPM1-214ENST00000558544 A6NED7 52 aa7.49□□□□□ -1.21
TPM1-214ENST00000558544 UQCR11O14957 56 aa7.46□□□□□ -1.21
TPM1-214ENST00000558544 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.21
TPM1-214ENST00000558544 PLAC4Q8WY50 150 aa7.46□□□□□ -1.21
TPM1-214ENST00000558544 A6NN06 94 aa7.46□□□□□ -1.22
TPM1-214ENST00000558544 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
TPM1-214ENST00000558544 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
TPM1-214ENST00000558544 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
TPM1-214ENST00000558544 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
TPM1-214ENST00000558544 A8MU10 97 aa7.38□□□□□ -1.23
TPM1-214ENST00000558544 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
TPM1-214ENST00000558544 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
TPM1-214ENST00000558544 KRTAP9-7A8MTY7 169 aa7.33□□□□□ -1.24
TPM1-214ENST00000558544 MT1XP80297 61 aa7.32□□□□□ -1.24
TPM1-214ENST00000558544 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
TPM1-214ENST00000558544 A0A0D9SG42 100 aa7.29□□□□□ -1.24
TPM1-214ENST00000558544 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
TPM1-214ENST00000558544 SYNE2Q8WXH0 6885 aaKnown RBP7.27□□□□□ -1.25
TPM1-214ENST00000558544 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
TPM1-214ENST00000558544 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.26
TPM1-214ENST00000558544 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
TPM1-214ENST00000558544 PRO0628Q9UI54 55 aa7.14□□□□□ -1.27
TPM1-214ENST00000558544 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
TPM1-214ENST00000558544 K7ERS5 55 aa7.02□□□□□ -1.29
TPM1-214ENST00000558544 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
TPM1-214ENST00000558544 KMT2DO14686 5537 aa7□□□□□ -1.29
TPM1-214ENST00000558544 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
TPM1-214ENST00000558544 KRTAP6-3Q3LI67 103 aa7□□□□□ -1.29
TPM1-214ENST00000558544 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
TPM1-214ENST00000558544 PMAIP1Q13794 54 aa6.92□□□□□ -1.3
TPM1-214ENST00000558544 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
TPM1-214ENST00000558544 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
TPM1-214ENST00000558544 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
TPM1-214ENST00000558544 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
TPM1-214ENST00000558544 NEBP20929 6669 aa6.81□□□□□ -1.32
TPM1-214ENST00000558544 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
TPM1-214ENST00000558544 ROMO1P60602 79 aa6.78□□□□□ -1.32
TPM1-214ENST00000558544 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
TPM1-214ENST00000558544 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
TPM1-214ENST00000558544 TNP1P09430 55 aa6.68□□□□□ -1.34
TPM1-214ENST00000558544 MDN1Q9NU22 5596 aa6.65□□□□□ -1.35
TPM1-214ENST00000558544 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
TPM1-214ENST00000558544 SPRR2EP22531 72 aa6.57□□□□□ -1.36
TPM1-214ENST00000558544 SPRR2BP35325 72 aa6.57□□□□□ -1.36
TPM1-214ENST00000558544 SPRR2AP35326 72 aa6.57□□□□□ -1.36
TPM1-214ENST00000558544 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
TPM1-214ENST00000558544 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
TPM1-214ENST00000558544 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
TPM1-214ENST00000558544 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
TPM1-214ENST00000558544 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms