RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
SMAD3-205ENST00000558428 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
SMAD3-205ENST00000558428 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
SMAD3-205ENST00000558428 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
SMAD3-205ENST00000558428 A8MUN3 132 aa5.75□□□□□ -1.49
SMAD3-205ENST00000558428 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
SMAD3-205ENST00000558428 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
SMAD3-205ENST00000558428 NDUFC1O43677 76 aa5.7□□□□□ -1.5
SMAD3-205ENST00000558428 DMAC1Q96GE9 116 aa5.65□□□□□ -1.5
SMAD3-205ENST00000558428 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
SMAD3-205ENST00000558428 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
SMAD3-205ENST00000558428 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
SMAD3-205ENST00000558428 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
SMAD3-205ENST00000558428 H0YAA0 97 aa5.58□□□□□ -1.52
SMAD3-205ENST00000558428 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
SMAD3-205ENST00000558428 ACYP2P14621 99 aa5.56□□□□□ -1.52
SMAD3-205ENST00000558428 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
SMAD3-205ENST00000558428 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
SMAD3-205ENST00000558428 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
SMAD3-205ENST00000558428 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
SMAD3-205ENST00000558428 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
SMAD3-205ENST00000558428 Q5VV11 94 aa5.51□□□□□ -1.53
SMAD3-205ENST00000558428 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
SMAD3-205ENST00000558428 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
SMAD3-205ENST00000558428 MT1BP07438 61 aa5.48□□□□□ -1.53
SMAD3-205ENST00000558428 COX7CP15954 63 aa5.48□□□□□ -1.53
SMAD3-205ENST00000558428 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
SMAD3-205ENST00000558428 SPTSSBQ8NFR3 76 aa5.46□□□□□ -1.54
SMAD3-205ENST00000558428 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
SMAD3-205ENST00000558428 P0C880 135 aa5.44□□□□□ -1.54
SMAD3-205ENST00000558428 R4GN34 69 aa5.4□□□□□ -1.54
SMAD3-205ENST00000558428 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
SMAD3-205ENST00000558428 A6NN06 94 aa5.37□□□□□ -1.55
SMAD3-205ENST00000558428 M0QZ58 72 aa5.37□□□□□ -1.55
SMAD3-205ENST00000558428 CYSTM1Q9H1C7 97 aa5.36□□□□□ -1.55
SMAD3-205ENST00000558428 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
SMAD3-205ENST00000558428 H7BZZ5 65 aa5.35□□□□□ -1.55
SMAD3-205ENST00000558428 COA5Q86WW8 74 aa5.35□□□□□ -1.55
SMAD3-205ENST00000558428 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
SMAD3-205ENST00000558428 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
SMAD3-205ENST00000558428 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
SMAD3-205ENST00000558428 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
SMAD3-205ENST00000558428 CCDC179H3BU77 68 aa5.27□□□□□ -1.57
SMAD3-205ENST00000558428 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
SMAD3-205ENST00000558428 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
SMAD3-205ENST00000558428 SEC61GP60059 68 aa5.19□□□□□ -1.58
SMAD3-205ENST00000558428 MT1XP80297 61 aa5.19□□□□□ -1.58
SMAD3-205ENST00000558428 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
SMAD3-205ENST00000558428 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
SMAD3-205ENST00000558428 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
SMAD3-205ENST00000558428 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
SMAD3-205ENST00000558428 TMEM258P61165 79 aa5.08□□□□□ -1.6
SMAD3-205ENST00000558428 A0A1B0GU33 70 aa5.07□□□□□ -1.6
SMAD3-205ENST00000558428 A0A1B0GU69 56 aa5.07□□□□□ -1.6
SMAD3-205ENST00000558428 KMT2DO14686 5537 aa5.07□□□□□ -1.6
SMAD3-205ENST00000558428 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
SMAD3-205ENST00000558428 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
SMAD3-205ENST00000558428 A0A0D9SG42 100 aa5.03□□□□□ -1.6
SMAD3-205ENST00000558428 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
SMAD3-205ENST00000558428 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
SMAD3-205ENST00000558428 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
SMAD3-205ENST00000558428 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
SMAD3-205ENST00000558428 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
SMAD3-205ENST00000558428 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
SMAD3-205ENST00000558428 LINC01558Q9Y6Z2 57 aa4.96□□□□□ -1.62
SMAD3-205ENST00000558428 SMIM26A0A096LP01 95 aa4.94□□□□□ -1.62
SMAD3-205ENST00000558428 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
SMAD3-205ENST00000558428 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
SMAD3-205ENST00000558428 NEBP20929 6669 aa4.92□□□□□ -1.62
SMAD3-205ENST00000558428 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
SMAD3-205ENST00000558428 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
SMAD3-205ENST00000558428 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
SMAD3-205ENST00000558428 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
SMAD3-205ENST00000558428 A8MU10 97 aa4.9□□□□□ -1.63
SMAD3-205ENST00000558428 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
SMAD3-205ENST00000558428 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
SMAD3-205ENST00000558428 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
SMAD3-205ENST00000558428 UQCR11O14957 56 aa4.81□□□□□ -1.64
SMAD3-205ENST00000558428 SPRR2EP22531 72 aa4.78□□□□□ -1.64
SMAD3-205ENST00000558428 SPRR2BP35325 72 aa4.78□□□□□ -1.64
SMAD3-205ENST00000558428 SPRR2AP35326 72 aa4.78□□□□□ -1.64
SMAD3-205ENST00000558428 V9GYY9 64 aa4.78□□□□□ -1.64
SMAD3-205ENST00000558428 PCP4P48539 62 aa4.77□□□□□ -1.65
SMAD3-205ENST00000558428 Q1T7F1 81 aa4.74□□□□□ -1.65
SMAD3-205ENST00000558428 PSPHP1O15172 72 aa4.73□□□□□ -1.65
SMAD3-205ENST00000558428 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
SMAD3-205ENST00000558428 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
SMAD3-205ENST00000558428 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
SMAD3-205ENST00000558428 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
SMAD3-205ENST00000558428 TNP1P09430 55 aa4.65□□□□□ -1.67
SMAD3-205ENST00000558428 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
SMAD3-205ENST00000558428 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SMAD3-205ENST00000558428 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
SMAD3-205ENST00000558428 K7ERS5 55 aa4.6□□□□□ -1.67
SMAD3-205ENST00000558428 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
SMAD3-205ENST00000558428 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
SMAD3-205ENST00000558428 A6NED7 52 aa4.58□□□□□ -1.68
SMAD3-205ENST00000558428 MT1EP04732 61 aa4.58□□□□□ -1.68
SMAD3-205ENST00000558428 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
SMAD3-205ENST00000558428 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms