RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 MP68P56378 58 aa6.9□□□□□ -1.3
USP3-205ENST00000557884 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
USP3-205ENST00000557884 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
USP3-205ENST00000557884 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
USP3-205ENST00000557884 MT1FP04733 61 aa6.86□□□□□ -1.31
USP3-205ENST00000557884 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
USP3-205ENST00000557884 S4R3F8 94 aa6.85□□□□□ -1.31
USP3-205ENST00000557884 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
USP3-205ENST00000557884 H3BPC8 53 aa6.8□□□□□ -1.32
USP3-205ENST00000557884 LCA10Q71F78 164 aa6.8□□□□□ -1.32
USP3-205ENST00000557884 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
USP3-205ENST00000557884 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
USP3-205ENST00000557884 SMIM20Q8N5G0 67 aa6.77□□□□□ -1.33
USP3-205ENST00000557884 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
USP3-205ENST00000557884 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
USP3-205ENST00000557884 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
USP3-205ENST00000557884 A8MUN3 132 aa6.71□□□□□ -1.34
USP3-205ENST00000557884 KRTAP4-2Q9BYR5 136 aa6.71□□□□□ -1.34
USP3-205ENST00000557884 USH2AO75445 5202 aa6.69□□□□□ -1.34
USP3-205ENST00000557884 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
USP3-205ENST00000557884 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
USP3-205ENST00000557884 NDUFC1O43677 76 aa6.65□□□□□ -1.34
USP3-205ENST00000557884 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
USP3-205ENST00000557884 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
USP3-205ENST00000557884 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
USP3-205ENST00000557884 SSPOA2VEC9 5147 aa6.56□□□□□ -1.36
USP3-205ENST00000557884 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
USP3-205ENST00000557884 ACYP2P14621 99 aa6.51□□□□□ -1.37
USP3-205ENST00000557884 COX7CP15954 63 aa6.51□□□□□ -1.37
USP3-205ENST00000557884 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
USP3-205ENST00000557884 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
USP3-205ENST00000557884 H0YAA0 97 aa6.48□□□□□ -1.37
USP3-205ENST00000557884 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
USP3-205ENST00000557884 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
USP3-205ENST00000557884 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
USP3-205ENST00000557884 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
USP3-205ENST00000557884 CYSTM1Q9H1C7 97 aa6.41□□□□□ -1.38
USP3-205ENST00000557884 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
USP3-205ENST00000557884 P0C880 135 aa6.38□□□□□ -1.39
USP3-205ENST00000557884 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
USP3-205ENST00000557884 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
USP3-205ENST00000557884 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
USP3-205ENST00000557884 Q5VV11 94 aa6.36□□□□□ -1.39
USP3-205ENST00000557884 H7BZZ5 65 aa6.35□□□□□ -1.39
USP3-205ENST00000557884 MT1BP07438 61 aa6.35□□□□□ -1.39
USP3-205ENST00000557884 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
USP3-205ENST00000557884 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
USP3-205ENST00000557884 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
USP3-205ENST00000557884 COA5Q86WW8 74 aa6.32□□□□□ -1.4
USP3-205ENST00000557884 R4GN34 69 aa6.28□□□□□ -1.4
USP3-205ENST00000557884 M0QZ58 72 aa6.26□□□□□ -1.41
USP3-205ENST00000557884 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
USP3-205ENST00000557884 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
USP3-205ENST00000557884 A6NN06 94 aa6.18□□□□□ -1.42
USP3-205ENST00000557884 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
USP3-205ENST00000557884 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
USP3-205ENST00000557884 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
USP3-205ENST00000557884 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
USP3-205ENST00000557884 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
USP3-205ENST00000557884 SEC61GP60059 68 aa6.09□□□□□ -1.43
USP3-205ENST00000557884 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
USP3-205ENST00000557884 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
USP3-205ENST00000557884 TMEM258P61165 79 aa6.05□□□□□ -1.44
USP3-205ENST00000557884 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
USP3-205ENST00000557884 MT1XP80297 61 aa6.02□□□□□ -1.45
USP3-205ENST00000557884 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
USP3-205ENST00000557884 A0A1B0GU33 70 aa5.97□□□□□ -1.45
USP3-205ENST00000557884 A0A1B0GU69 56 aa5.97□□□□□ -1.45
USP3-205ENST00000557884 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.45
USP3-205ENST00000557884 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
USP3-205ENST00000557884 A0A0D9SG42 100 aa5.93□□□□□ -1.46
USP3-205ENST00000557884 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
USP3-205ENST00000557884 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
USP3-205ENST00000557884 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
USP3-205ENST00000557884 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
USP3-205ENST00000557884 KMT2DO14686 5537 aa5.81□□□□□ -1.48
USP3-205ENST00000557884 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
USP3-205ENST00000557884 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
USP3-205ENST00000557884 A8MU10 97 aa5.79□□□□□ -1.48
USP3-205ENST00000557884 PCP4P48539 62 aa5.79□□□□□ -1.48
USP3-205ENST00000557884 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
USP3-205ENST00000557884 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
USP3-205ENST00000557884 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
USP3-205ENST00000557884 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
USP3-205ENST00000557884 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
USP3-205ENST00000557884 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
USP3-205ENST00000557884 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
USP3-205ENST00000557884 UQCR11O14957 56 aa5.66□□□□□ -1.5
USP3-205ENST00000557884 PSPHP1O15172 72 aa5.65□□□□□ -1.5
USP3-205ENST00000557884 V9GYY9 64 aa5.65□□□□□ -1.5
USP3-205ENST00000557884 Q1T7F1 81 aa5.64□□□□□ -1.51
USP3-205ENST00000557884 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
USP3-205ENST00000557884 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
USP3-205ENST00000557884 NEBP20929 6669 aa5.6□□□□□ -1.51
USP3-205ENST00000557884 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
USP3-205ENST00000557884 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
USP3-205ENST00000557884 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
USP3-205ENST00000557884 SPRR2EP22531 72 aa5.49□□□□□ -1.53
USP3-205ENST00000557884 SPRR2BP35325 72 aa5.49□□□□□ -1.53
USP3-205ENST00000557884 SPRR2AP35326 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms